Package ome.xml.meta

Interface MetadataRetrieve

All Superinterfaces:
BaseMetadata
All Known Subinterfaces:
IMetadata, OMEXMLMetadata
All Known Implementing Classes:
AbstractOMEXMLMetadata, AggregateMetadata, DummyMetadata, OMEXMLMetadataImpl

public interface MetadataRetrieve extends BaseMetadata
A proxy whose responsibility it is to extract biological image data from a particular storage medium.

The MetadataRetrieve interface encompasses the metadata that any specific storage medium (file, relational database, etc.) should be expected to access from its backing data model.

The MetadataRetrieve interface goes hand in hand with the MetadataStore interface. Essentially, MetadataRetrieve provides the "getter" methods for a storage medium, and MetadataStore provides the "setter" methods.

Since it often makes sense for a storage medium to implement both interfaces, there is also an IMetadata interface encompassing both MetadataStore and MetadataRetrieve, which reduces the need to cast between object types.

See OMEXMLMetadata for an example implementation.

Author:
Melissa Linkert linkert at wisc.edu, Curtis Rueden ctrueden at wisc.edu
  • Method Details

    • getBooleanAnnotationAnnotationCount

      int getBooleanAnnotationAnnotationCount(int booleanAnnotationIndex)
      Get the number of links to a BooleanAnnotation. This method returns the number of references to the specified BooleanAnnotation held by all model objects.
      Parameters:
      booleanAnnotationIndex - the BooleanAnnotation index.
      Returns:
      the number of BooleanAnnotation links.
    • getCommentAnnotationAnnotationCount

      int getCommentAnnotationAnnotationCount(int commentAnnotationIndex)
      Get the number of links to a CommentAnnotation. This method returns the number of references to the specified CommentAnnotation held by all model objects.
      Parameters:
      commentAnnotationIndex - the CommentAnnotation index.
      Returns:
      the number of CommentAnnotation links.
    • getDoubleAnnotationAnnotationCount

      int getDoubleAnnotationAnnotationCount(int doubleAnnotationIndex)
      Get the number of links to a DoubleAnnotation. This method returns the number of references to the specified DoubleAnnotation held by all model objects.
      Parameters:
      doubleAnnotationIndex - the DoubleAnnotation index.
      Returns:
      the number of DoubleAnnotation links.
    • getFileAnnotationAnnotationCount

      int getFileAnnotationAnnotationCount(int fileAnnotationIndex)
      Get the number of links to a FileAnnotation. This method returns the number of references to the specified FileAnnotation held by all model objects.
      Parameters:
      fileAnnotationIndex - the FileAnnotation index.
      Returns:
      the number of FileAnnotation links.
    • getListAnnotationAnnotationCount

      int getListAnnotationAnnotationCount(int listAnnotationIndex)
      Get the number of links to a ListAnnotation. This method returns the number of references to the specified ListAnnotation held by all model objects.
      Parameters:
      listAnnotationIndex - the ListAnnotation index.
      Returns:
      the number of ListAnnotation links.
    • getLongAnnotationAnnotationCount

      int getLongAnnotationAnnotationCount(int longAnnotationIndex)
      Get the number of links to a LongAnnotation. This method returns the number of references to the specified LongAnnotation held by all model objects.
      Parameters:
      longAnnotationIndex - the LongAnnotation index.
      Returns:
      the number of LongAnnotation links.
    • getMapAnnotationAnnotationCount

      int getMapAnnotationAnnotationCount(int mapAnnotationIndex)
      Get the number of links to a MapAnnotation. This method returns the number of references to the specified MapAnnotation held by all model objects.
      Parameters:
      mapAnnotationIndex - the MapAnnotation index.
      Returns:
      the number of MapAnnotation links.
    • getTagAnnotationAnnotationCount

      int getTagAnnotationAnnotationCount(int tagAnnotationIndex)
      Get the number of links to a TagAnnotation. This method returns the number of references to the specified TagAnnotation held by all model objects.
      Parameters:
      tagAnnotationIndex - the TagAnnotation index.
      Returns:
      the number of TagAnnotation links.
    • getTermAnnotationAnnotationCount

      int getTermAnnotationAnnotationCount(int termAnnotationIndex)
      Get the number of links to a TermAnnotation. This method returns the number of references to the specified TermAnnotation held by all model objects.
      Parameters:
      termAnnotationIndex - the TermAnnotation index.
      Returns:
      the number of TermAnnotation links.
    • getTimestampAnnotationAnnotationCount

      int getTimestampAnnotationAnnotationCount(int timestampAnnotationIndex)
      Get the number of links to a TimestampAnnotation. This method returns the number of references to the specified TimestampAnnotation held by all model objects.
      Parameters:
      timestampAnnotationIndex - the TimestampAnnotation index.
      Returns:
      the number of TimestampAnnotation links.
    • getXMLAnnotationAnnotationCount

      int getXMLAnnotationAnnotationCount(int xmlAnnotationIndex)
      Get the number of links to an XMLAnnotation. This method returns the number of references to the specified XMLAnnotation held by all model objects.
      Parameters:
      xmlAnnotationIndex - the XMLAnnotation index.
      Returns:
      the number of XMLAnnotation links.
    • getLightSourceType

      String getLightSourceType(int instrumentIndex, int lightSourceIndex)
      Get the type of a LightSource.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      Returns:
      the LightSource type.
    • getLightSourceCount

      int getLightSourceCount(int instrumentIndex)
      Get the number of LightSource elements.
      Parameters:
      instrumentIndex - the Instrument index.
      Returns:
      the number of LightSource elements.
    • getShapeType

      String getShapeType(int ROIIndex, int shapeIndex)
      Get the type of a Shape.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the Shape type.
    • getShapeCount

      int getShapeCount(int ROIIndex)
      Get the number of Shape elements.
      Parameters:
      ROIIndex - the ROI index.
      Returns:
      the number of Shape elements.
    • getChannelAnnotationRefCount

      int getChannelAnnotationRefCount(int imageIndex, int channelIndex)
      Get the number of AnnotationRef elements in Channel.
      Parameters:
      imageIndex - the Image index.
      channelIndex - the Channel index.
      Returns:
      the number of AnnotationRef elements.
    • getDatasetAnnotationRefCount

      int getDatasetAnnotationRefCount(int datasetIndex)
      Get the number of AnnotationRef elements in Dataset.
      Parameters:
      datasetIndex - the Dataset index.
      Returns:
      the number of AnnotationRef elements.
    • getDetectorAnnotationRefCount

      int getDetectorAnnotationRefCount(int instrumentIndex, int detectorIndex)
      Get the number of AnnotationRef elements in Detector.
      Parameters:
      instrumentIndex - the Instrument index.
      detectorIndex - the Detector index.
      Returns:
      the number of AnnotationRef elements.
    • getDichroicAnnotationRefCount

      int getDichroicAnnotationRefCount(int instrumentIndex, int dichroicIndex)
      Get the number of AnnotationRef elements in Dichroic.
      Parameters:
      instrumentIndex - the Instrument index.
      dichroicIndex - the Dichroic index.
      Returns:
      the number of AnnotationRef elements.
    • getExperimenterAnnotationRefCount

      int getExperimenterAnnotationRefCount(int experimenterIndex)
      Get the number of AnnotationRef elements in Experimenter.
      Parameters:
      experimenterIndex - the Experimenter index.
      Returns:
      the number of AnnotationRef elements.
    • getExperimenterGroupAnnotationRefCount

      int getExperimenterGroupAnnotationRefCount(int experimenterGroupIndex)
      Get the number of AnnotationRef elements in ExperimenterGroup.
      Parameters:
      experimenterGroupIndex - the ExperimenterGroup index.
      Returns:
      the number of AnnotationRef elements.
    • getFilterAnnotationRefCount

      int getFilterAnnotationRefCount(int instrumentIndex, int filterIndex)
      Get the number of AnnotationRef elements in Filter.
      Parameters:
      instrumentIndex - the Instrument index.
      filterIndex - the Filter index.
      Returns:
      the number of AnnotationRef elements.
    • getFolderAnnotationRefCount

      int getFolderAnnotationRefCount(int folderIndex)
      Get the number of AnnotationRef elements in Folder.
      Parameters:
      folderIndex - the Folder index.
      Returns:
      the number of AnnotationRef elements.
    • getImageAnnotationRefCount

      int getImageAnnotationRefCount(int imageIndex)
      Get the number of AnnotationRef elements in Image.
      Parameters:
      imageIndex - the Image index.
      Returns:
      the number of AnnotationRef elements.
    • getInstrumentAnnotationRefCount

      int getInstrumentAnnotationRefCount(int instrumentIndex)
      Get the number of AnnotationRef elements in Instrument.
      Parameters:
      instrumentIndex - the Instrument index.
      Returns:
      the number of AnnotationRef elements.
    • getLightPathAnnotationRefCount

      int getLightPathAnnotationRefCount(int imageIndex, int channelIndex)
      Get the number of AnnotationRef elements in LightPath.
      Parameters:
      imageIndex - the Image index.
      channelIndex - the Channel index.
      Returns:
      the number of AnnotationRef elements.
    • getLightSourceAnnotationRefCount

      int getLightSourceAnnotationRefCount(int instrumentIndex, int lightSourceIndex)
      Get the number of AnnotationRef elements in LightSource.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      Returns:
      the number of AnnotationRef elements.
    • getObjectiveAnnotationRefCount

      int getObjectiveAnnotationRefCount(int instrumentIndex, int objectiveIndex)
      Get the number of AnnotationRef elements in Objective.
      Parameters:
      instrumentIndex - the Instrument index.
      objectiveIndex - the Objective index.
      Returns:
      the number of AnnotationRef elements.
    • getPlaneAnnotationRefCount

      int getPlaneAnnotationRefCount(int imageIndex, int planeIndex)
      Get the number of AnnotationRef elements in Plane.
      Parameters:
      imageIndex - the Image index.
      planeIndex - the Plane index.
      Returns:
      the number of AnnotationRef elements.
    • getPlateAnnotationRefCount

      int getPlateAnnotationRefCount(int plateIndex)
      Get the number of AnnotationRef elements in Plate.
      Parameters:
      plateIndex - the Plate index.
      Returns:
      the number of AnnotationRef elements.
    • getPlateAcquisitionAnnotationRefCount

      int getPlateAcquisitionAnnotationRefCount(int plateIndex, int plateAcquisitionIndex)
      Get the number of AnnotationRef elements in PlateAcquisition.
      Parameters:
      plateIndex - the Plate index.
      plateAcquisitionIndex - the PlateAcquisition index.
      Returns:
      the number of AnnotationRef elements.
    • getProjectAnnotationRefCount

      int getProjectAnnotationRefCount(int projectIndex)
      Get the number of AnnotationRef elements in Project.
      Parameters:
      projectIndex - the Project index.
      Returns:
      the number of AnnotationRef elements.
    • getROIAnnotationRefCount

      int getROIAnnotationRefCount(int ROIIndex)
      Get the number of AnnotationRef elements in ROI.
      Parameters:
      ROIIndex - the ROI index.
      Returns:
      the number of AnnotationRef elements.
    • getReagentAnnotationRefCount

      int getReagentAnnotationRefCount(int screenIndex, int reagentIndex)
      Get the number of AnnotationRef elements in Reagent.
      Parameters:
      screenIndex - the Screen index.
      reagentIndex - the Reagent index.
      Returns:
      the number of AnnotationRef elements.
    • getScreenAnnotationRefCount

      int getScreenAnnotationRefCount(int screenIndex)
      Get the number of AnnotationRef elements in Screen.
      Parameters:
      screenIndex - the Screen index.
      Returns:
      the number of AnnotationRef elements.
    • getShapeAnnotationRefCount

      int getShapeAnnotationRefCount(int ROIIndex, int shapeIndex)
      Get the number of AnnotationRef elements in Shape.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the number of AnnotationRef elements.
    • getWellAnnotationRefCount

      int getWellAnnotationRefCount(int plateIndex, int wellIndex)
      Get the number of AnnotationRef elements in Well.
      Parameters:
      plateIndex - the Plate index.
      wellIndex - the Well index.
      Returns:
      the number of AnnotationRef elements.
    • getPixelsBinDataCount

      int getPixelsBinDataCount(int imageIndex)
      Get the number of BinData elements in Pixels.
      Parameters:
      imageIndex - the Image index.
      Returns:
      the number of BinData elements.
    • getBooleanAnnotationCount

      int getBooleanAnnotationCount()
      Get the number of BooleanAnnotation elements.
      Returns:
      the number of BooleanAnnotation elements.
    • getChannelCount

      int getChannelCount(int imageIndex)
      Get the number of Channel elements.
      Parameters:
      imageIndex - the Image index.
      Returns:
      the number of Channel elements.
    • getCommentAnnotationCount

      int getCommentAnnotationCount()
      Get the number of CommentAnnotation elements.
      Returns:
      the number of CommentAnnotation elements.
    • getDatasetCount

      int getDatasetCount()
      Get the number of Dataset elements.
      Returns:
      the number of Dataset elements.
    • getDatasetRefCount

      int getDatasetRefCount(int projectIndex)
      Get the number of DatasetRef elements.
      Parameters:
      projectIndex - the Project index.
      Returns:
      the number of DatasetRef elements.
    • getDetectorCount

      int getDetectorCount(int instrumentIndex)
      Get the number of Detector elements.
      Parameters:
      instrumentIndex - the Instrument index.
      Returns:
      the number of Detector elements.
    • getDichroicCount

      int getDichroicCount(int instrumentIndex)
      Get the number of Dichroic elements.
      Parameters:
      instrumentIndex - the Instrument index.
      Returns:
      the number of Dichroic elements.
    • getDoubleAnnotationCount

      int getDoubleAnnotationCount()
      Get the number of DoubleAnnotation elements.
      Returns:
      the number of DoubleAnnotation elements.
    • getFilterSetEmissionFilterRefCount

      int getFilterSetEmissionFilterRefCount(int instrumentIndex, int filterSetIndex)
      Get the number of EmissionFilterRef elements in FilterSet.
      Parameters:
      instrumentIndex - the Instrument index.
      filterSetIndex - the FilterSet index.
      Returns:
      the number of EmissionFilterRef elements.
    • getLightPathEmissionFilterRefCount

      int getLightPathEmissionFilterRefCount(int imageIndex, int channelIndex)
      Get the number of EmissionFilterRef elements in LightPath.
      Parameters:
      imageIndex - the Image index.
      channelIndex - the Channel index.
      Returns:
      the number of EmissionFilterRef elements.
    • getFilterSetExcitationFilterRefCount

      int getFilterSetExcitationFilterRefCount(int instrumentIndex, int filterSetIndex)
      Get the number of ExcitationFilterRef elements in FilterSet.
      Parameters:
      instrumentIndex - the Instrument index.
      filterSetIndex - the FilterSet index.
      Returns:
      the number of ExcitationFilterRef elements.
    • getLightPathExcitationFilterRefCount

      int getLightPathExcitationFilterRefCount(int imageIndex, int channelIndex)
      Get the number of ExcitationFilterRef elements in LightPath.
      Parameters:
      imageIndex - the Image index.
      channelIndex - the Channel index.
      Returns:
      the number of ExcitationFilterRef elements.
    • getExperimentCount

      int getExperimentCount()
      Get the number of Experiment elements.
      Returns:
      the number of Experiment elements.
    • getExperimenterCount

      int getExperimenterCount()
      Get the number of Experimenter elements.
      Returns:
      the number of Experimenter elements.
    • getExperimenterGroupCount

      int getExperimenterGroupCount()
      Get the number of ExperimenterGroup elements.
      Returns:
      the number of ExperimenterGroup elements.
    • getExperimenterGroupExperimenterRefCount

      int getExperimenterGroupExperimenterRefCount(int experimenterGroupIndex)
      Get the number of ExperimenterRef elements in ExperimenterGroup.
      Parameters:
      experimenterGroupIndex - the ExperimenterGroup index.
      Returns:
      the number of ExperimenterRef elements.
    • getFileAnnotationCount

      int getFileAnnotationCount()
      Get the number of FileAnnotation elements.
      Returns:
      the number of FileAnnotation elements.
    • getFilterCount

      int getFilterCount(int instrumentIndex)
      Get the number of Filter elements.
      Parameters:
      instrumentIndex - the Instrument index.
      Returns:
      the number of Filter elements.
    • getFilterSetCount

      int getFilterSetCount(int instrumentIndex)
      Get the number of FilterSet elements.
      Parameters:
      instrumentIndex - the Instrument index.
      Returns:
      the number of FilterSet elements.
    • getFolderCount

      int getFolderCount()
      Get the number of Folder elements.
      Returns:
      the number of Folder elements.
    • getFolderRefCount

      int getFolderRefCount(int folderIndex)
      Get the number of FolderRef elements.
      Parameters:
      folderIndex - the Folder index.
      Returns:
      the number of FolderRef elements.
    • getImageCount

      int getImageCount()
      Get the number of Image elements.
      Returns:
      the number of Image elements.
    • getDatasetImageRefCount

      int getDatasetImageRefCount(int datasetIndex)
      Get the number of ImageRef elements in Dataset.
      Parameters:
      datasetIndex - the Dataset index.
      Returns:
      the number of ImageRef elements.
    • getFolderImageRefCount

      int getFolderImageRefCount(int folderIndex)
      Get the number of ImageRef elements in Folder.
      Parameters:
      folderIndex - the Folder index.
      Returns:
      the number of ImageRef elements.
    • getInstrumentCount

      int getInstrumentCount()
      Get the number of Instrument elements.
      Returns:
      the number of Instrument elements.
    • getLeaderCount

      int getLeaderCount(int experimenterGroupIndex)
      Get the number of Leader elements.
      Parameters:
      experimenterGroupIndex - the ExperimenterGroup index.
      Returns:
      the number of Leader elements.
    • getMicrobeamManipulationLightSourceSettingsCount

      int getMicrobeamManipulationLightSourceSettingsCount(int experimentIndex, int microbeamManipulationIndex)
      Get the number of LightSourceSettings elements in MicrobeamManipulation.
      Parameters:
      experimentIndex - the Experiment index.
      microbeamManipulationIndex - the MicrobeamManipulation index.
      Returns:
      the number of LightSourceSettings elements.
    • getListAnnotationCount

      int getListAnnotationCount()
      Get the number of ListAnnotation elements.
      Returns:
      the number of ListAnnotation elements.
    • getLongAnnotationCount

      int getLongAnnotationCount()
      Get the number of LongAnnotation elements.
      Returns:
      the number of LongAnnotation elements.
    • getMapAnnotationCount

      int getMapAnnotationCount()
      Get the number of MapAnnotation elements.
      Returns:
      the number of MapAnnotation elements.
    • getMicrobeamManipulationCount

      int getMicrobeamManipulationCount(int experimentIndex)
      Get the number of MicrobeamManipulation elements.
      Parameters:
      experimentIndex - the Experiment index.
      Returns:
      the number of MicrobeamManipulation elements.
    • getMicrobeamManipulationRefCount

      int getMicrobeamManipulationRefCount(int imageIndex)
      Get the number of MicrobeamManipulationRef elements.
      Parameters:
      imageIndex - the Image index.
      Returns:
      the number of MicrobeamManipulationRef elements.
    • getObjectiveCount

      int getObjectiveCount(int instrumentIndex)
      Get the number of Objective elements.
      Parameters:
      instrumentIndex - the Instrument index.
      Returns:
      the number of Objective elements.
    • getPlaneCount

      int getPlaneCount(int imageIndex)
      Get the number of Plane elements.
      Parameters:
      imageIndex - the Image index.
      Returns:
      the number of Plane elements.
    • getPlateCount

      int getPlateCount()
      Get the number of Plate elements.
      Returns:
      the number of Plate elements.
    • getPlateAcquisitionCount

      int getPlateAcquisitionCount(int plateIndex)
      Get the number of PlateAcquisition elements.
      Parameters:
      plateIndex - the Plate index.
      Returns:
      the number of PlateAcquisition elements.
    • getPlateRefCount

      int getPlateRefCount(int screenIndex)
      Get the number of PlateRef elements.
      Parameters:
      screenIndex - the Screen index.
      Returns:
      the number of PlateRef elements.
    • getProjectCount

      int getProjectCount()
      Get the number of Project elements.
      Returns:
      the number of Project elements.
    • getROICount

      int getROICount()
      Get the number of ROI elements.
      Returns:
      the number of ROI elements.
    • getFolderROIRefCount

      int getFolderROIRefCount(int folderIndex)
      Get the number of ROIRef elements in Folder.
      Parameters:
      folderIndex - the Folder index.
      Returns:
      the number of ROIRef elements.
    • getImageROIRefCount

      int getImageROIRefCount(int imageIndex)
      Get the number of ROIRef elements in Image.
      Parameters:
      imageIndex - the Image index.
      Returns:
      the number of ROIRef elements.
    • getMicrobeamManipulationROIRefCount

      int getMicrobeamManipulationROIRefCount(int experimentIndex, int microbeamManipulationIndex)
      Get the number of ROIRef elements in MicrobeamManipulation.
      Parameters:
      experimentIndex - the Experiment index.
      microbeamManipulationIndex - the MicrobeamManipulation index.
      Returns:
      the number of ROIRef elements.
    • getReagentCount

      int getReagentCount(int screenIndex)
      Get the number of Reagent elements.
      Parameters:
      screenIndex - the Screen index.
      Returns:
      the number of Reagent elements.
    • getScreenCount

      int getScreenCount()
      Get the number of Screen elements.
      Returns:
      the number of Screen elements.
    • getTagAnnotationCount

      int getTagAnnotationCount()
      Get the number of TagAnnotation elements.
      Returns:
      the number of TagAnnotation elements.
    • getTermAnnotationCount

      int getTermAnnotationCount()
      Get the number of TermAnnotation elements.
      Returns:
      the number of TermAnnotation elements.
    • getTiffDataCount

      int getTiffDataCount(int imageIndex)
      Get the number of TiffData elements.
      Parameters:
      imageIndex - the Image index.
      Returns:
      the number of TiffData elements.
    • getTimestampAnnotationCount

      int getTimestampAnnotationCount()
      Get the number of TimestampAnnotation elements.
      Returns:
      the number of TimestampAnnotation elements.
    • getUUIDValue

      String getUUIDValue(int imageIndex, int tiffDataIndex)
      Get the text value of UUID.
      Parameters:
      imageIndex - the Image index.
      tiffDataIndex - the TiffData index.
      Returns:
      the text value.
    • getWellCount

      int getWellCount(int plateIndex)
      Get the number of Well elements.
      Parameters:
      plateIndex - the Plate index.
      Returns:
      the number of Well elements.
    • getWellSampleCount

      int getWellSampleCount(int plateIndex, int wellIndex)
      Get the number of WellSample elements.
      Parameters:
      plateIndex - the Plate index.
      wellIndex - the Well index.
      Returns:
      the number of WellSample elements.
    • getWellSampleRefCount

      int getWellSampleRefCount(int plateIndex, int plateAcquisitionIndex)
      Get the number of WellSampleRef elements.
      Parameters:
      plateIndex - the Plate index.
      plateAcquisitionIndex - the PlateAcquisition index.
      Returns:
      the number of WellSampleRef elements.
    • getXMLAnnotationCount

      int getXMLAnnotationCount()
      Get the number of XMLAnnotation elements.
      Returns:
      the number of XMLAnnotation elements.
    • getMapAnnotationValue

      List<MapPair> getMapAnnotationValue(int mapAnnotationIndex)
      Get the values from a MapAnnotation.
      Parameters:
      mapAnnotationIndex - the MapAnnotation index.
      Returns:
      the MapAnnotation values.
    • getGenericExcitationSourceMap

      List<MapPair> getGenericExcitationSourceMap(int instrumentIndex, int lightSourceIndex)
      Get the MapAnnotation values from a GenericExcitationSource.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      Returns:
      the MapAnnotation values.
    • getImagingEnvironmentMap

      List<MapPair> getImagingEnvironmentMap(int imageIndex)
      Get the MapAnnotation values from a ImagingEnvironment.
      Parameters:
      imageIndex - the Image index.
      Returns:
      the MapAnnotation values.
    • getUUID

      String getUUID()
      Get the UUID associated with this collection of metadata.
      Returns:
      the UUID.
    • getCreator

      default String getCreator()
      Gets the Creator associated with this collection of metadata.
    • getArcAnnotationRef

      String getArcAnnotationRef(int instrumentIndex, int lightSourceIndex, int annotationRefIndex)
      Get the AnnotationRef property of Arc.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      annotationRefIndex - AnnotationRef index.
      Returns:
      the AnnotationRef property.
    • getArcID

      String getArcID(int instrumentIndex, int lightSourceIndex)
      Get the ID property of Arc.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      Returns:
      the ID property.
    • getArcLotNumber

      String getArcLotNumber(int instrumentIndex, int lightSourceIndex)
      Get the LotNumber property of Arc.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      Returns:
      the LotNumber property.
    • getArcManufacturer

      String getArcManufacturer(int instrumentIndex, int lightSourceIndex)
      Get the Manufacturer property of Arc.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      Returns:
      the Manufacturer property.
    • getArcModel

      String getArcModel(int instrumentIndex, int lightSourceIndex)
      Get the Model property of Arc.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      Returns:
      the Model property.
    • getArcPower

      Power getArcPower(int instrumentIndex, int lightSourceIndex)
      Get the Power property of Arc.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      Returns:
      the Power property.
    • getArcSerialNumber

      String getArcSerialNumber(int instrumentIndex, int lightSourceIndex)
      Get the SerialNumber property of Arc.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      Returns:
      the SerialNumber property.
    • getArcType

      ArcType getArcType(int instrumentIndex, int lightSourceIndex)
      Get the Type property of Arc.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      Returns:
      the Type property.
    • getBinaryFileBinData

      byte[] getBinaryFileBinData(int fileAnnotationIndex)
      Get the Base64Binary property of BinData.
      Parameters:
      fileAnnotationIndex - the FileAnnotation index.
      Returns:
      the Base64Binary property.
    • getMaskBinData

      byte[] getMaskBinData(int ROIIndex, int shapeIndex)
      Get the Base64Binary property of BinData.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the Base64Binary property.
    • getPixelsBinData

      byte[] getPixelsBinData(int imageIndex, int binDataIndex)
      Get the Base64Binary property of BinData.
      Parameters:
      imageIndex - the Image index.
      binDataIndex - the BinData index.
      Returns:
      the Base64Binary property.
    • getBinaryFileBinDataBigEndian

      Boolean getBinaryFileBinDataBigEndian(int fileAnnotationIndex)
      Get the BigEndian property of BinData.
      Parameters:
      fileAnnotationIndex - the FileAnnotation index.
      Returns:
      the BigEndian property.
    • getMaskBinDataBigEndian

      Boolean getMaskBinDataBigEndian(int ROIIndex, int shapeIndex)
      Get the BigEndian property of BinData.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the BigEndian property.
    • getPixelsBinDataBigEndian

      Boolean getPixelsBinDataBigEndian(int imageIndex, int binDataIndex)
      Get the BigEndian property of BinData.
      Parameters:
      imageIndex - the Image index.
      binDataIndex - the BinData index.
      Returns:
      the BigEndian property.
    • getBinaryFileBinDataCompression

      Compression getBinaryFileBinDataCompression(int fileAnnotationIndex)
      Get the Compression property of BinData.
      Parameters:
      fileAnnotationIndex - the FileAnnotation index.
      Returns:
      the Compression property.
    • getMaskBinDataCompression

      Compression getMaskBinDataCompression(int ROIIndex, int shapeIndex)
      Get the Compression property of BinData.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the Compression property.
    • getPixelsBinDataCompression

      Compression getPixelsBinDataCompression(int imageIndex, int binDataIndex)
      Get the Compression property of BinData.
      Parameters:
      imageIndex - the Image index.
      binDataIndex - the BinData index.
      Returns:
      the Compression property.
    • getBinaryFileBinDataLength

      NonNegativeLong getBinaryFileBinDataLength(int fileAnnotationIndex)
      Get the Length property of BinData.
      Parameters:
      fileAnnotationIndex - the FileAnnotation index.
      Returns:
      the Length property.
    • getMaskBinDataLength

      NonNegativeLong getMaskBinDataLength(int ROIIndex, int shapeIndex)
      Get the Length property of BinData.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the Length property.
    • getPixelsBinDataLength

      NonNegativeLong getPixelsBinDataLength(int imageIndex, int binDataIndex)
      Get the Length property of BinData.
      Parameters:
      imageIndex - the Image index.
      binDataIndex - the BinData index.
      Returns:
      the Length property.
    • getBinaryFileFileName

      String getBinaryFileFileName(int fileAnnotationIndex)
      Get the FileName property of BinaryFile.
      Parameters:
      fileAnnotationIndex - the FileAnnotation index.
      Returns:
      the FileName property.
    • getBinaryFileMIMEType

      String getBinaryFileMIMEType(int fileAnnotationIndex)
      Get the MIMEType property of BinaryFile.
      Parameters:
      fileAnnotationIndex - the FileAnnotation index.
      Returns:
      the MIMEType property.
    • getBinaryFileSize

      NonNegativeLong getBinaryFileSize(int fileAnnotationIndex)
      Get the Size property of BinaryFile.
      Parameters:
      fileAnnotationIndex - the FileAnnotation index.
      Returns:
      the Size property.
    • getBinaryOnlyMetadataFile

      String getBinaryOnlyMetadataFile()
      Get the MetadataFile property of BinaryOnly.
      Returns:
      the MetadataFile property.
    • getBinaryOnlyUUID

      String getBinaryOnlyUUID()
      Get the UUID property of BinaryOnly.
      Returns:
      the UUID property.
    • getBooleanAnnotationAnnotationRef

      String getBooleanAnnotationAnnotationRef(int booleanAnnotationIndex, int annotationRefIndex)
      Get the AnnotationRef property of BooleanAnnotation.
      Parameters:
      booleanAnnotationIndex - the BooleanAnnotation index.
      annotationRefIndex - AnnotationRef index.
      Returns:
      the AnnotationRef property.
    • getBooleanAnnotationAnnotator

      String getBooleanAnnotationAnnotator(int booleanAnnotationIndex)
      Get the Annotator property of BooleanAnnotation.
      Parameters:
      booleanAnnotationIndex - the BooleanAnnotation index.
      Returns:
      the Annotator property.
    • getBooleanAnnotationDescription

      String getBooleanAnnotationDescription(int booleanAnnotationIndex)
      Get the Description property of BooleanAnnotation.
      Parameters:
      booleanAnnotationIndex - the BooleanAnnotation index.
      Returns:
      the Description property.
    • getBooleanAnnotationID

      String getBooleanAnnotationID(int booleanAnnotationIndex)
      Get the ID property of BooleanAnnotation.
      Parameters:
      booleanAnnotationIndex - the BooleanAnnotation index.
      Returns:
      the ID property.
    • getBooleanAnnotationNamespace

      String getBooleanAnnotationNamespace(int booleanAnnotationIndex)
      Get the Namespace property of BooleanAnnotation.
      Parameters:
      booleanAnnotationIndex - the BooleanAnnotation index.
      Returns:
      the Namespace property.
    • getBooleanAnnotationValue

      Boolean getBooleanAnnotationValue(int booleanAnnotationIndex)
      Get the Value property of BooleanAnnotation.
      Parameters:
      booleanAnnotationIndex - the BooleanAnnotation index.
      Returns:
      the Value property.
    • getChannelAcquisitionMode

      AcquisitionMode getChannelAcquisitionMode(int imageIndex, int channelIndex)
      Get the AcquisitionMode property of Channel.
      Parameters:
      imageIndex - the Image index.
      channelIndex - the Channel index.
      Returns:
      the AcquisitionMode property.
    • getChannelAnnotationRef

      String getChannelAnnotationRef(int imageIndex, int channelIndex, int annotationRefIndex)
      Get the AnnotationRef property of Channel.
      Parameters:
      imageIndex - the Image index.
      channelIndex - the Channel index.
      annotationRefIndex - AnnotationRef index.
      Returns:
      the AnnotationRef property.
    • getChannelColor

      Color getChannelColor(int imageIndex, int channelIndex)
      Get the Color property of Channel.
      Parameters:
      imageIndex - the Image index.
      channelIndex - the Channel index.
      Returns:
      the Color property.
    • getChannelContrastMethod

      ContrastMethod getChannelContrastMethod(int imageIndex, int channelIndex)
      Get the ContrastMethod property of Channel.
      Parameters:
      imageIndex - the Image index.
      channelIndex - the Channel index.
      Returns:
      the ContrastMethod property.
    • getChannelEmissionWavelength

      Length getChannelEmissionWavelength(int imageIndex, int channelIndex)
      Get the EmissionWavelength property of Channel.
      Parameters:
      imageIndex - the Image index.
      channelIndex - the Channel index.
      Returns:
      the EmissionWavelength property.
    • getChannelExcitationWavelength

      Length getChannelExcitationWavelength(int imageIndex, int channelIndex)
      Get the ExcitationWavelength property of Channel.
      Parameters:
      imageIndex - the Image index.
      channelIndex - the Channel index.
      Returns:
      the ExcitationWavelength property.
    • getChannelFilterSetRef

      String getChannelFilterSetRef(int imageIndex, int channelIndex)
      Get the FilterSetRef property of Channel.
      Parameters:
      imageIndex - the Image index.
      channelIndex - the Channel index.
      Returns:
      the FilterSetRef property.
    • getChannelFluor

      String getChannelFluor(int imageIndex, int channelIndex)
      Get the Fluor property of Channel.
      Parameters:
      imageIndex - the Image index.
      channelIndex - the Channel index.
      Returns:
      the Fluor property.
    • getChannelID

      String getChannelID(int imageIndex, int channelIndex)
      Get the ID property of Channel.
      Parameters:
      imageIndex - the Image index.
      channelIndex - the Channel index.
      Returns:
      the ID property.
    • getChannelIlluminationType

      IlluminationType getChannelIlluminationType(int imageIndex, int channelIndex)
      Get the IlluminationType property of Channel.
      Parameters:
      imageIndex - the Image index.
      channelIndex - the Channel index.
      Returns:
      the IlluminationType property.
    • getChannelNDFilter

      Double getChannelNDFilter(int imageIndex, int channelIndex)
      Get the NDFilter property of Channel.
      Parameters:
      imageIndex - the Image index.
      channelIndex - the Channel index.
      Returns:
      the NDFilter property.
    • getChannelName

      String getChannelName(int imageIndex, int channelIndex)
      Get the Name property of Channel.
      Parameters:
      imageIndex - the Image index.
      channelIndex - the Channel index.
      Returns:
      the Name property.
    • getChannelPinholeSize

      Length getChannelPinholeSize(int imageIndex, int channelIndex)
      Get the PinholeSize property of Channel.
      Parameters:
      imageIndex - the Image index.
      channelIndex - the Channel index.
      Returns:
      the PinholeSize property.
    • getChannelPockelCellSetting

      Integer getChannelPockelCellSetting(int imageIndex, int channelIndex)
      Get the PockelCellSetting property of Channel.
      Parameters:
      imageIndex - the Image index.
      channelIndex - the Channel index.
      Returns:
      the PockelCellSetting property.
    • getChannelSamplesPerPixel

      PositiveInteger getChannelSamplesPerPixel(int imageIndex, int channelIndex)
      Get the SamplesPerPixel property of Channel.
      Parameters:
      imageIndex - the Image index.
      channelIndex - the Channel index.
      Returns:
      the SamplesPerPixel property.
    • getCommentAnnotationAnnotationRef

      String getCommentAnnotationAnnotationRef(int commentAnnotationIndex, int annotationRefIndex)
      Get the AnnotationRef property of CommentAnnotation.
      Parameters:
      commentAnnotationIndex - the CommentAnnotation index.
      annotationRefIndex - AnnotationRef index.
      Returns:
      the AnnotationRef property.
    • getCommentAnnotationAnnotator

      String getCommentAnnotationAnnotator(int commentAnnotationIndex)
      Get the Annotator property of CommentAnnotation.
      Parameters:
      commentAnnotationIndex - the CommentAnnotation index.
      Returns:
      the Annotator property.
    • getCommentAnnotationDescription

      String getCommentAnnotationDescription(int commentAnnotationIndex)
      Get the Description property of CommentAnnotation.
      Parameters:
      commentAnnotationIndex - the CommentAnnotation index.
      Returns:
      the Description property.
    • getCommentAnnotationID

      String getCommentAnnotationID(int commentAnnotationIndex)
      Get the ID property of CommentAnnotation.
      Parameters:
      commentAnnotationIndex - the CommentAnnotation index.
      Returns:
      the ID property.
    • getCommentAnnotationNamespace

      String getCommentAnnotationNamespace(int commentAnnotationIndex)
      Get the Namespace property of CommentAnnotation.
      Parameters:
      commentAnnotationIndex - the CommentAnnotation index.
      Returns:
      the Namespace property.
    • getCommentAnnotationValue

      String getCommentAnnotationValue(int commentAnnotationIndex)
      Get the Value property of CommentAnnotation.
      Parameters:
      commentAnnotationIndex - the CommentAnnotation index.
      Returns:
      the Value property.
    • getDatasetAnnotationRef

      String getDatasetAnnotationRef(int datasetIndex, int annotationRefIndex)
      Get the AnnotationRef property of Dataset.
      Parameters:
      datasetIndex - the Dataset index.
      annotationRefIndex - AnnotationRef index.
      Returns:
      the AnnotationRef property.
    • getDatasetDescription

      String getDatasetDescription(int datasetIndex)
      Get the Description property of Dataset.
      Parameters:
      datasetIndex - the Dataset index.
      Returns:
      the Description property.
    • getDatasetExperimenterGroupRef

      String getDatasetExperimenterGroupRef(int datasetIndex)
      Get the ExperimenterGroupRef property of Dataset.
      Parameters:
      datasetIndex - the Dataset index.
      Returns:
      the ExperimenterGroupRef property.
    • getDatasetExperimenterRef

      String getDatasetExperimenterRef(int datasetIndex)
      Get the ExperimenterRef property of Dataset.
      Parameters:
      datasetIndex - the Dataset index.
      Returns:
      the ExperimenterRef property.
    • getDatasetID

      String getDatasetID(int datasetIndex)
      Get the ID property of Dataset.
      Parameters:
      datasetIndex - the Dataset index.
      Returns:
      the ID property.
    • getDatasetImageRef

      String getDatasetImageRef(int datasetIndex, int imageRefIndex)
      Get the ImageRef property of Dataset.
      Parameters:
      datasetIndex - the Dataset index.
      imageRefIndex - ImageRef index.
      Returns:
      the ImageRef property.
    • getDatasetName

      String getDatasetName(int datasetIndex)
      Get the Name property of Dataset.
      Parameters:
      datasetIndex - the Dataset index.
      Returns:
      the Name property.
    • getDetectorAmplificationGain

      Double getDetectorAmplificationGain(int instrumentIndex, int detectorIndex)
      Get the AmplificationGain property of Detector.
      Parameters:
      instrumentIndex - the Instrument index.
      detectorIndex - the Detector index.
      Returns:
      the AmplificationGain property.
    • getDetectorAnnotationRef

      String getDetectorAnnotationRef(int instrumentIndex, int detectorIndex, int annotationRefIndex)
      Get the AnnotationRef property of Detector.
      Parameters:
      instrumentIndex - the Instrument index.
      detectorIndex - the Detector index.
      annotationRefIndex - AnnotationRef index.
      Returns:
      the AnnotationRef property.
    • getDetectorGain

      Double getDetectorGain(int instrumentIndex, int detectorIndex)
      Get the Gain property of Detector.
      Parameters:
      instrumentIndex - the Instrument index.
      detectorIndex - the Detector index.
      Returns:
      the Gain property.
    • getDetectorID

      String getDetectorID(int instrumentIndex, int detectorIndex)
      Get the ID property of Detector.
      Parameters:
      instrumentIndex - the Instrument index.
      detectorIndex - the Detector index.
      Returns:
      the ID property.
    • getDetectorLotNumber

      String getDetectorLotNumber(int instrumentIndex, int detectorIndex)
      Get the LotNumber property of Detector.
      Parameters:
      instrumentIndex - the Instrument index.
      detectorIndex - the Detector index.
      Returns:
      the LotNumber property.
    • getDetectorManufacturer

      String getDetectorManufacturer(int instrumentIndex, int detectorIndex)
      Get the Manufacturer property of Detector.
      Parameters:
      instrumentIndex - the Instrument index.
      detectorIndex - the Detector index.
      Returns:
      the Manufacturer property.
    • getDetectorModel

      String getDetectorModel(int instrumentIndex, int detectorIndex)
      Get the Model property of Detector.
      Parameters:
      instrumentIndex - the Instrument index.
      detectorIndex - the Detector index.
      Returns:
      the Model property.
    • getDetectorOffset

      Double getDetectorOffset(int instrumentIndex, int detectorIndex)
      Get the Offset property of Detector.
      Parameters:
      instrumentIndex - the Instrument index.
      detectorIndex - the Detector index.
      Returns:
      the Offset property.
    • getDetectorSerialNumber

      String getDetectorSerialNumber(int instrumentIndex, int detectorIndex)
      Get the SerialNumber property of Detector.
      Parameters:
      instrumentIndex - the Instrument index.
      detectorIndex - the Detector index.
      Returns:
      the SerialNumber property.
    • getDetectorType

      DetectorType getDetectorType(int instrumentIndex, int detectorIndex)
      Get the Type property of Detector.
      Parameters:
      instrumentIndex - the Instrument index.
      detectorIndex - the Detector index.
      Returns:
      the Type property.
    • getDetectorVoltage

      ElectricPotential getDetectorVoltage(int instrumentIndex, int detectorIndex)
      Get the Voltage property of Detector.
      Parameters:
      instrumentIndex - the Instrument index.
      detectorIndex - the Detector index.
      Returns:
      the Voltage property.
    • getDetectorZoom

      Double getDetectorZoom(int instrumentIndex, int detectorIndex)
      Get the Zoom property of Detector.
      Parameters:
      instrumentIndex - the Instrument index.
      detectorIndex - the Detector index.
      Returns:
      the Zoom property.
    • getDetectorSettingsBinning

      Binning getDetectorSettingsBinning(int imageIndex, int channelIndex)
      Get the Binning property of DetectorSettings.
      Parameters:
      imageIndex - the Image index.
      channelIndex - the Channel index.
      Returns:
      the Binning property.
    • getDetectorSettingsGain

      Double getDetectorSettingsGain(int imageIndex, int channelIndex)
      Get the Gain property of DetectorSettings.
      Parameters:
      imageIndex - the Image index.
      channelIndex - the Channel index.
      Returns:
      the Gain property.
    • getDetectorSettingsID

      String getDetectorSettingsID(int imageIndex, int channelIndex)
      Get the ID property of DetectorSettings.
      Parameters:
      imageIndex - the Image index.
      channelIndex - the Channel index.
      Returns:
      the ID property.
    • getDetectorSettingsIntegration

      PositiveInteger getDetectorSettingsIntegration(int imageIndex, int channelIndex)
      Get the Integration property of DetectorSettings.
      Parameters:
      imageIndex - the Image index.
      channelIndex - the Channel index.
      Returns:
      the Integration property.
    • getDetectorSettingsOffset

      Double getDetectorSettingsOffset(int imageIndex, int channelIndex)
      Get the Offset property of DetectorSettings.
      Parameters:
      imageIndex - the Image index.
      channelIndex - the Channel index.
      Returns:
      the Offset property.
    • getDetectorSettingsReadOutRate

      Frequency getDetectorSettingsReadOutRate(int imageIndex, int channelIndex)
      Get the ReadOutRate property of DetectorSettings.
      Parameters:
      imageIndex - the Image index.
      channelIndex - the Channel index.
      Returns:
      the ReadOutRate property.
    • getDetectorSettingsVoltage

      ElectricPotential getDetectorSettingsVoltage(int imageIndex, int channelIndex)
      Get the Voltage property of DetectorSettings.
      Parameters:
      imageIndex - the Image index.
      channelIndex - the Channel index.
      Returns:
      the Voltage property.
    • getDetectorSettingsZoom

      Double getDetectorSettingsZoom(int imageIndex, int channelIndex)
      Get the Zoom property of DetectorSettings.
      Parameters:
      imageIndex - the Image index.
      channelIndex - the Channel index.
      Returns:
      the Zoom property.
    • getDichroicAnnotationRef

      String getDichroicAnnotationRef(int instrumentIndex, int dichroicIndex, int annotationRefIndex)
      Get the AnnotationRef property of Dichroic.
      Parameters:
      instrumentIndex - the Instrument index.
      dichroicIndex - the Dichroic index.
      annotationRefIndex - AnnotationRef index.
      Returns:
      the AnnotationRef property.
    • getDichroicID

      String getDichroicID(int instrumentIndex, int dichroicIndex)
      Get the ID property of Dichroic.
      Parameters:
      instrumentIndex - the Instrument index.
      dichroicIndex - the Dichroic index.
      Returns:
      the ID property.
    • getDichroicLotNumber

      String getDichroicLotNumber(int instrumentIndex, int dichroicIndex)
      Get the LotNumber property of Dichroic.
      Parameters:
      instrumentIndex - the Instrument index.
      dichroicIndex - the Dichroic index.
      Returns:
      the LotNumber property.
    • getDichroicManufacturer

      String getDichroicManufacturer(int instrumentIndex, int dichroicIndex)
      Get the Manufacturer property of Dichroic.
      Parameters:
      instrumentIndex - the Instrument index.
      dichroicIndex - the Dichroic index.
      Returns:
      the Manufacturer property.
    • getDichroicModel

      String getDichroicModel(int instrumentIndex, int dichroicIndex)
      Get the Model property of Dichroic.
      Parameters:
      instrumentIndex - the Instrument index.
      dichroicIndex - the Dichroic index.
      Returns:
      the Model property.
    • getDichroicSerialNumber

      String getDichroicSerialNumber(int instrumentIndex, int dichroicIndex)
      Get the SerialNumber property of Dichroic.
      Parameters:
      instrumentIndex - the Instrument index.
      dichroicIndex - the Dichroic index.
      Returns:
      the SerialNumber property.
    • getDoubleAnnotationAnnotationRef

      String getDoubleAnnotationAnnotationRef(int doubleAnnotationIndex, int annotationRefIndex)
      Get the AnnotationRef property of DoubleAnnotation.
      Parameters:
      doubleAnnotationIndex - the DoubleAnnotation index.
      annotationRefIndex - AnnotationRef index.
      Returns:
      the AnnotationRef property.
    • getDoubleAnnotationAnnotator

      String getDoubleAnnotationAnnotator(int doubleAnnotationIndex)
      Get the Annotator property of DoubleAnnotation.
      Parameters:
      doubleAnnotationIndex - the DoubleAnnotation index.
      Returns:
      the Annotator property.
    • getDoubleAnnotationDescription

      String getDoubleAnnotationDescription(int doubleAnnotationIndex)
      Get the Description property of DoubleAnnotation.
      Parameters:
      doubleAnnotationIndex - the DoubleAnnotation index.
      Returns:
      the Description property.
    • getDoubleAnnotationID

      String getDoubleAnnotationID(int doubleAnnotationIndex)
      Get the ID property of DoubleAnnotation.
      Parameters:
      doubleAnnotationIndex - the DoubleAnnotation index.
      Returns:
      the ID property.
    • getDoubleAnnotationNamespace

      String getDoubleAnnotationNamespace(int doubleAnnotationIndex)
      Get the Namespace property of DoubleAnnotation.
      Parameters:
      doubleAnnotationIndex - the DoubleAnnotation index.
      Returns:
      the Namespace property.
    • getDoubleAnnotationValue

      Double getDoubleAnnotationValue(int doubleAnnotationIndex)
      Get the Value property of DoubleAnnotation.
      Parameters:
      doubleAnnotationIndex - the DoubleAnnotation index.
      Returns:
      the Value property.
    • getEllipseAnnotationRef

      String getEllipseAnnotationRef(int ROIIndex, int shapeIndex, int annotationRefIndex)
      Get the AnnotationRef property of Ellipse.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      annotationRefIndex - AnnotationRef index.
      Returns:
      the AnnotationRef property.
    • getEllipseFillColor

      Color getEllipseFillColor(int ROIIndex, int shapeIndex)
      Get the FillColor property of Ellipse.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the FillColor property.
    • getEllipseFillRule

      FillRule getEllipseFillRule(int ROIIndex, int shapeIndex)
      Get the FillRule property of Ellipse.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the FillRule property.
    • getEllipseFontFamily

      FontFamily getEllipseFontFamily(int ROIIndex, int shapeIndex)
      Get the FontFamily property of Ellipse.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the FontFamily property.
    • getEllipseFontSize

      Length getEllipseFontSize(int ROIIndex, int shapeIndex)
      Get the FontSize property of Ellipse.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the FontSize property.
    • getEllipseFontStyle

      FontStyle getEllipseFontStyle(int ROIIndex, int shapeIndex)
      Get the FontStyle property of Ellipse.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the FontStyle property.
    • getEllipseID

      String getEllipseID(int ROIIndex, int shapeIndex)
      Get the ID property of Ellipse.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the ID property.
    • getEllipseLocked

      Boolean getEllipseLocked(int ROIIndex, int shapeIndex)
      Get the Locked property of Ellipse.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the Locked property.
    • getEllipseRadiusX

      Double getEllipseRadiusX(int ROIIndex, int shapeIndex)
      Get the RadiusX property of Ellipse.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the RadiusX property.
    • getEllipseRadiusY

      Double getEllipseRadiusY(int ROIIndex, int shapeIndex)
      Get the RadiusY property of Ellipse.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the RadiusY property.
    • getEllipseStrokeColor

      Color getEllipseStrokeColor(int ROIIndex, int shapeIndex)
      Get the StrokeColor property of Ellipse.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the StrokeColor property.
    • getEllipseStrokeDashArray

      String getEllipseStrokeDashArray(int ROIIndex, int shapeIndex)
      Get the StrokeDashArray property of Ellipse.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the StrokeDashArray property.
    • getEllipseStrokeWidth

      Length getEllipseStrokeWidth(int ROIIndex, int shapeIndex)
      Get the StrokeWidth property of Ellipse.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the StrokeWidth property.
    • getEllipseText

      String getEllipseText(int ROIIndex, int shapeIndex)
      Get the Text property of Ellipse.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the Text property.
    • getEllipseTheC

      NonNegativeInteger getEllipseTheC(int ROIIndex, int shapeIndex)
      Get the TheC property of Ellipse.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the TheC property.
    • getEllipseTheT

      NonNegativeInteger getEllipseTheT(int ROIIndex, int shapeIndex)
      Get the TheT property of Ellipse.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the TheT property.
    • getEllipseTheZ

      NonNegativeInteger getEllipseTheZ(int ROIIndex, int shapeIndex)
      Get the TheZ property of Ellipse.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the TheZ property.
    • getEllipseTransform

      AffineTransform getEllipseTransform(int ROIIndex, int shapeIndex)
      Get the Transform property of Ellipse.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the Transform property.
    • getEllipseX

      Double getEllipseX(int ROIIndex, int shapeIndex)
      Get the X property of Ellipse.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the X property.
    • getEllipseY

      Double getEllipseY(int ROIIndex, int shapeIndex)
      Get the Y property of Ellipse.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the Y property.
    • getExperimentDescription

      String getExperimentDescription(int experimentIndex)
      Get the Description property of Experiment.
      Parameters:
      experimentIndex - the Experiment index.
      Returns:
      the Description property.
    • getExperimentExperimenterRef

      String getExperimentExperimenterRef(int experimentIndex)
      Get the ExperimenterRef property of Experiment.
      Parameters:
      experimentIndex - the Experiment index.
      Returns:
      the ExperimenterRef property.
    • getExperimentID

      String getExperimentID(int experimentIndex)
      Get the ID property of Experiment.
      Parameters:
      experimentIndex - the Experiment index.
      Returns:
      the ID property.
    • getExperimentType

      ExperimentType getExperimentType(int experimentIndex)
      Get the Type property of Experiment.
      Parameters:
      experimentIndex - the Experiment index.
      Returns:
      the Type property.
    • getExperimenterAnnotationRef

      String getExperimenterAnnotationRef(int experimenterIndex, int annotationRefIndex)
      Get the AnnotationRef property of Experimenter.
      Parameters:
      experimenterIndex - the Experimenter index.
      annotationRefIndex - AnnotationRef index.
      Returns:
      the AnnotationRef property.
    • getExperimenterEmail

      String getExperimenterEmail(int experimenterIndex)
      Get the Email property of Experimenter.
      Parameters:
      experimenterIndex - the Experimenter index.
      Returns:
      the Email property.
    • getExperimenterFirstName

      String getExperimenterFirstName(int experimenterIndex)
      Get the FirstName property of Experimenter.
      Parameters:
      experimenterIndex - the Experimenter index.
      Returns:
      the FirstName property.
    • getExperimenterID

      String getExperimenterID(int experimenterIndex)
      Get the ID property of Experimenter.
      Parameters:
      experimenterIndex - the Experimenter index.
      Returns:
      the ID property.
    • getExperimenterInstitution

      String getExperimenterInstitution(int experimenterIndex)
      Get the Institution property of Experimenter.
      Parameters:
      experimenterIndex - the Experimenter index.
      Returns:
      the Institution property.
    • getExperimenterLastName

      String getExperimenterLastName(int experimenterIndex)
      Get the LastName property of Experimenter.
      Parameters:
      experimenterIndex - the Experimenter index.
      Returns:
      the LastName property.
    • getExperimenterMiddleName

      String getExperimenterMiddleName(int experimenterIndex)
      Get the MiddleName property of Experimenter.
      Parameters:
      experimenterIndex - the Experimenter index.
      Returns:
      the MiddleName property.
    • getExperimenterUserName

      String getExperimenterUserName(int experimenterIndex)
      Get the UserName property of Experimenter.
      Parameters:
      experimenterIndex - the Experimenter index.
      Returns:
      the UserName property.
    • getExperimenterGroupAnnotationRef

      String getExperimenterGroupAnnotationRef(int experimenterGroupIndex, int annotationRefIndex)
      Get the AnnotationRef property of ExperimenterGroup.
      Parameters:
      experimenterGroupIndex - the ExperimenterGroup index.
      annotationRefIndex - AnnotationRef index.
      Returns:
      the AnnotationRef property.
    • getExperimenterGroupDescription

      String getExperimenterGroupDescription(int experimenterGroupIndex)
      Get the Description property of ExperimenterGroup.
      Parameters:
      experimenterGroupIndex - the ExperimenterGroup index.
      Returns:
      the Description property.
    • getExperimenterGroupExperimenterRef

      String getExperimenterGroupExperimenterRef(int experimenterGroupIndex, int experimenterRefIndex)
      Get the ExperimenterRef property of ExperimenterGroup.
      Parameters:
      experimenterGroupIndex - the ExperimenterGroup index.
      experimenterRefIndex - ExperimenterRef index.
      Returns:
      the ExperimenterRef property.
    • getExperimenterGroupID

      String getExperimenterGroupID(int experimenterGroupIndex)
      Get the ID property of ExperimenterGroup.
      Parameters:
      experimenterGroupIndex - the ExperimenterGroup index.
      Returns:
      the ID property.
    • getExperimenterGroupLeader

      String getExperimenterGroupLeader(int experimenterGroupIndex, int leaderIndex)
      Get the Leader property of ExperimenterGroup.
      Parameters:
      experimenterGroupIndex - the ExperimenterGroup index.
      leaderIndex - Leader index.
      Returns:
      the Leader property.
    • getExperimenterGroupName

      String getExperimenterGroupName(int experimenterGroupIndex)
      Get the Name property of ExperimenterGroup.
      Parameters:
      experimenterGroupIndex - the ExperimenterGroup index.
      Returns:
      the Name property.
    • getFilamentAnnotationRef

      String getFilamentAnnotationRef(int instrumentIndex, int lightSourceIndex, int annotationRefIndex)
      Get the AnnotationRef property of Filament.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      annotationRefIndex - AnnotationRef index.
      Returns:
      the AnnotationRef property.
    • getFilamentID

      String getFilamentID(int instrumentIndex, int lightSourceIndex)
      Get the ID property of Filament.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      Returns:
      the ID property.
    • getFilamentLotNumber

      String getFilamentLotNumber(int instrumentIndex, int lightSourceIndex)
      Get the LotNumber property of Filament.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      Returns:
      the LotNumber property.
    • getFilamentManufacturer

      String getFilamentManufacturer(int instrumentIndex, int lightSourceIndex)
      Get the Manufacturer property of Filament.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      Returns:
      the Manufacturer property.
    • getFilamentModel

      String getFilamentModel(int instrumentIndex, int lightSourceIndex)
      Get the Model property of Filament.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      Returns:
      the Model property.
    • getFilamentPower

      Power getFilamentPower(int instrumentIndex, int lightSourceIndex)
      Get the Power property of Filament.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      Returns:
      the Power property.
    • getFilamentSerialNumber

      String getFilamentSerialNumber(int instrumentIndex, int lightSourceIndex)
      Get the SerialNumber property of Filament.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      Returns:
      the SerialNumber property.
    • getFilamentType

      FilamentType getFilamentType(int instrumentIndex, int lightSourceIndex)
      Get the Type property of Filament.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      Returns:
      the Type property.
    • getFileAnnotationAnnotationRef

      String getFileAnnotationAnnotationRef(int fileAnnotationIndex, int annotationRefIndex)
      Get the AnnotationRef property of FileAnnotation.
      Parameters:
      fileAnnotationIndex - the FileAnnotation index.
      annotationRefIndex - AnnotationRef index.
      Returns:
      the AnnotationRef property.
    • getFileAnnotationAnnotator

      String getFileAnnotationAnnotator(int fileAnnotationIndex)
      Get the Annotator property of FileAnnotation.
      Parameters:
      fileAnnotationIndex - the FileAnnotation index.
      Returns:
      the Annotator property.
    • getFileAnnotationDescription

      String getFileAnnotationDescription(int fileAnnotationIndex)
      Get the Description property of FileAnnotation.
      Parameters:
      fileAnnotationIndex - the FileAnnotation index.
      Returns:
      the Description property.
    • getFileAnnotationID

      String getFileAnnotationID(int fileAnnotationIndex)
      Get the ID property of FileAnnotation.
      Parameters:
      fileAnnotationIndex - the FileAnnotation index.
      Returns:
      the ID property.
    • getFileAnnotationNamespace

      String getFileAnnotationNamespace(int fileAnnotationIndex)
      Get the Namespace property of FileAnnotation.
      Parameters:
      fileAnnotationIndex - the FileAnnotation index.
      Returns:
      the Namespace property.
    • getFilterAnnotationRef

      String getFilterAnnotationRef(int instrumentIndex, int filterIndex, int annotationRefIndex)
      Get the AnnotationRef property of Filter.
      Parameters:
      instrumentIndex - the Instrument index.
      filterIndex - the Filter index.
      annotationRefIndex - AnnotationRef index.
      Returns:
      the AnnotationRef property.
    • getFilterFilterWheel

      String getFilterFilterWheel(int instrumentIndex, int filterIndex)
      Get the FilterWheel property of Filter.
      Parameters:
      instrumentIndex - the Instrument index.
      filterIndex - the Filter index.
      Returns:
      the FilterWheel property.
    • getFilterID

      String getFilterID(int instrumentIndex, int filterIndex)
      Get the ID property of Filter.
      Parameters:
      instrumentIndex - the Instrument index.
      filterIndex - the Filter index.
      Returns:
      the ID property.
    • getFilterLotNumber

      String getFilterLotNumber(int instrumentIndex, int filterIndex)
      Get the LotNumber property of Filter.
      Parameters:
      instrumentIndex - the Instrument index.
      filterIndex - the Filter index.
      Returns:
      the LotNumber property.
    • getFilterManufacturer

      String getFilterManufacturer(int instrumentIndex, int filterIndex)
      Get the Manufacturer property of Filter.
      Parameters:
      instrumentIndex - the Instrument index.
      filterIndex - the Filter index.
      Returns:
      the Manufacturer property.
    • getFilterModel

      String getFilterModel(int instrumentIndex, int filterIndex)
      Get the Model property of Filter.
      Parameters:
      instrumentIndex - the Instrument index.
      filterIndex - the Filter index.
      Returns:
      the Model property.
    • getFilterSerialNumber

      String getFilterSerialNumber(int instrumentIndex, int filterIndex)
      Get the SerialNumber property of Filter.
      Parameters:
      instrumentIndex - the Instrument index.
      filterIndex - the Filter index.
      Returns:
      the SerialNumber property.
    • getFilterType

      FilterType getFilterType(int instrumentIndex, int filterIndex)
      Get the Type property of Filter.
      Parameters:
      instrumentIndex - the Instrument index.
      filterIndex - the Filter index.
      Returns:
      the Type property.
    • getFilterSetDichroicRef

      String getFilterSetDichroicRef(int instrumentIndex, int filterSetIndex)
      Get the DichroicRef property of FilterSet.
      Parameters:
      instrumentIndex - the Instrument index.
      filterSetIndex - the FilterSet index.
      Returns:
      the DichroicRef property.
    • getFilterSetEmissionFilterRef

      String getFilterSetEmissionFilterRef(int instrumentIndex, int filterSetIndex, int emissionFilterRefIndex)
      Get the EmissionFilterRef property of FilterSet.
      Parameters:
      instrumentIndex - the Instrument index.
      filterSetIndex - the FilterSet index.
      emissionFilterRefIndex - EmissionFilterRef index.
      Returns:
      the EmissionFilterRef property.
    • getFilterSetExcitationFilterRef

      String getFilterSetExcitationFilterRef(int instrumentIndex, int filterSetIndex, int excitationFilterRefIndex)
      Get the ExcitationFilterRef property of FilterSet.
      Parameters:
      instrumentIndex - the Instrument index.
      filterSetIndex - the FilterSet index.
      excitationFilterRefIndex - ExcitationFilterRef index.
      Returns:
      the ExcitationFilterRef property.
    • getFilterSetID

      String getFilterSetID(int instrumentIndex, int filterSetIndex)
      Get the ID property of FilterSet.
      Parameters:
      instrumentIndex - the Instrument index.
      filterSetIndex - the FilterSet index.
      Returns:
      the ID property.
    • getFilterSetLotNumber

      String getFilterSetLotNumber(int instrumentIndex, int filterSetIndex)
      Get the LotNumber property of FilterSet.
      Parameters:
      instrumentIndex - the Instrument index.
      filterSetIndex - the FilterSet index.
      Returns:
      the LotNumber property.
    • getFilterSetManufacturer

      String getFilterSetManufacturer(int instrumentIndex, int filterSetIndex)
      Get the Manufacturer property of FilterSet.
      Parameters:
      instrumentIndex - the Instrument index.
      filterSetIndex - the FilterSet index.
      Returns:
      the Manufacturer property.
    • getFilterSetModel

      String getFilterSetModel(int instrumentIndex, int filterSetIndex)
      Get the Model property of FilterSet.
      Parameters:
      instrumentIndex - the Instrument index.
      filterSetIndex - the FilterSet index.
      Returns:
      the Model property.
    • getFilterSetSerialNumber

      String getFilterSetSerialNumber(int instrumentIndex, int filterSetIndex)
      Get the SerialNumber property of FilterSet.
      Parameters:
      instrumentIndex - the Instrument index.
      filterSetIndex - the FilterSet index.
      Returns:
      the SerialNumber property.
    • getFolderAnnotationRef

      String getFolderAnnotationRef(int folderIndex, int annotationRefIndex)
      Get the AnnotationRef property of Folder.
      Parameters:
      folderIndex - the Folder index.
      annotationRefIndex - AnnotationRef index.
      Returns:
      the AnnotationRef property.
    • getFolderDescription

      String getFolderDescription(int folderIndex)
      Get the Description property of Folder.
      Parameters:
      folderIndex - the Folder index.
      Returns:
      the Description property.
    • getFolderFolderRef

      String getFolderFolderRef(int folderIndex, int folderRefIndex)
      Get the FolderRef property of Folder.
      Parameters:
      folderIndex - the Folder index.
      folderRefIndex - FolderRef index.
      Returns:
      the FolderRef property.
    • getFolderID

      String getFolderID(int folderIndex)
      Get the ID property of Folder.
      Parameters:
      folderIndex - the Folder index.
      Returns:
      the ID property.
    • getFolderImageRef

      String getFolderImageRef(int folderIndex, int imageRefIndex)
      Get the ImageRef property of Folder.
      Parameters:
      folderIndex - the Folder index.
      imageRefIndex - ImageRef index.
      Returns:
      the ImageRef property.
    • getFolderName

      String getFolderName(int folderIndex)
      Get the Name property of Folder.
      Parameters:
      folderIndex - the Folder index.
      Returns:
      the Name property.
    • getFolderROIRef

      String getFolderROIRef(int folderIndex, int ROIRefIndex)
      Get the ROIRef property of Folder.
      Parameters:
      folderIndex - the Folder index.
      ROIRefIndex - ROIRef index.
      Returns:
      the ROIRef property.
    • getGenericExcitationSourceAnnotationRef

      String getGenericExcitationSourceAnnotationRef(int instrumentIndex, int lightSourceIndex, int annotationRefIndex)
      Get the AnnotationRef property of GenericExcitationSource.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      annotationRefIndex - AnnotationRef index.
      Returns:
      the AnnotationRef property.
    • getGenericExcitationSourceID

      String getGenericExcitationSourceID(int instrumentIndex, int lightSourceIndex)
      Get the ID property of GenericExcitationSource.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      Returns:
      the ID property.
    • getGenericExcitationSourceLotNumber

      String getGenericExcitationSourceLotNumber(int instrumentIndex, int lightSourceIndex)
      Get the LotNumber property of GenericExcitationSource.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      Returns:
      the LotNumber property.
    • getGenericExcitationSourceManufacturer

      String getGenericExcitationSourceManufacturer(int instrumentIndex, int lightSourceIndex)
      Get the Manufacturer property of GenericExcitationSource.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      Returns:
      the Manufacturer property.
    • getGenericExcitationSourceModel

      String getGenericExcitationSourceModel(int instrumentIndex, int lightSourceIndex)
      Get the Model property of GenericExcitationSource.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      Returns:
      the Model property.
    • getGenericExcitationSourcePower

      Power getGenericExcitationSourcePower(int instrumentIndex, int lightSourceIndex)
      Get the Power property of GenericExcitationSource.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      Returns:
      the Power property.
    • getGenericExcitationSourceSerialNumber

      String getGenericExcitationSourceSerialNumber(int instrumentIndex, int lightSourceIndex)
      Get the SerialNumber property of GenericExcitationSource.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      Returns:
      the SerialNumber property.
    • getImageAcquisitionDate

      Timestamp getImageAcquisitionDate(int imageIndex)
      Get the AcquisitionDate property of Image.
      Parameters:
      imageIndex - the Image index.
      Returns:
      the AcquisitionDate property.
    • getImageAnnotationRef

      String getImageAnnotationRef(int imageIndex, int annotationRefIndex)
      Get the AnnotationRef property of Image.
      Parameters:
      imageIndex - the Image index.
      annotationRefIndex - AnnotationRef index.
      Returns:
      the AnnotationRef property.
    • getImageDescription

      String getImageDescription(int imageIndex)
      Get the Description property of Image.
      Parameters:
      imageIndex - the Image index.
      Returns:
      the Description property.
    • getImageExperimentRef

      String getImageExperimentRef(int imageIndex)
      Get the ExperimentRef property of Image.
      Parameters:
      imageIndex - the Image index.
      Returns:
      the ExperimentRef property.
    • getImageExperimenterGroupRef

      String getImageExperimenterGroupRef(int imageIndex)
      Get the ExperimenterGroupRef property of Image.
      Parameters:
      imageIndex - the Image index.
      Returns:
      the ExperimenterGroupRef property.
    • getImageExperimenterRef

      String getImageExperimenterRef(int imageIndex)
      Get the ExperimenterRef property of Image.
      Parameters:
      imageIndex - the Image index.
      Returns:
      the ExperimenterRef property.
    • getImageID

      String getImageID(int imageIndex)
      Get the ID property of Image.
      Parameters:
      imageIndex - the Image index.
      Returns:
      the ID property.
    • getImageInstrumentRef

      String getImageInstrumentRef(int imageIndex)
      Get the InstrumentRef property of Image.
      Parameters:
      imageIndex - the Image index.
      Returns:
      the InstrumentRef property.
    • getImageMicrobeamManipulationRef

      String getImageMicrobeamManipulationRef(int imageIndex, int microbeamManipulationRefIndex)
      Get the MicrobeamManipulationRef property of Image.
      Parameters:
      imageIndex - the Image index.
      microbeamManipulationRefIndex - MicrobeamManipulationRef index.
      Returns:
      the MicrobeamManipulationRef property.
    • getImageName

      String getImageName(int imageIndex)
      Get the Name property of Image.
      Parameters:
      imageIndex - the Image index.
      Returns:
      the Name property.
    • getImageROIRef

      String getImageROIRef(int imageIndex, int ROIRefIndex)
      Get the ROIRef property of Image.
      Parameters:
      imageIndex - the Image index.
      ROIRefIndex - ROIRef index.
      Returns:
      the ROIRef property.
    • getImagingEnvironmentAirPressure

      Pressure getImagingEnvironmentAirPressure(int imageIndex)
      Get the AirPressure property of ImagingEnvironment.
      Parameters:
      imageIndex - the Image index.
      Returns:
      the AirPressure property.
    • getImagingEnvironmentCO2Percent

      PercentFraction getImagingEnvironmentCO2Percent(int imageIndex)
      Get the CO2Percent property of ImagingEnvironment.
      Parameters:
      imageIndex - the Image index.
      Returns:
      the CO2Percent property.
    • getImagingEnvironmentHumidity

      PercentFraction getImagingEnvironmentHumidity(int imageIndex)
      Get the Humidity property of ImagingEnvironment.
      Parameters:
      imageIndex - the Image index.
      Returns:
      the Humidity property.
    • getImagingEnvironmentTemperature

      Temperature getImagingEnvironmentTemperature(int imageIndex)
      Get the Temperature property of ImagingEnvironment.
      Parameters:
      imageIndex - the Image index.
      Returns:
      the Temperature property.
    • getInstrumentAnnotationRef

      String getInstrumentAnnotationRef(int instrumentIndex, int annotationRefIndex)
      Get the AnnotationRef property of Instrument.
      Parameters:
      instrumentIndex - the Instrument index.
      annotationRefIndex - AnnotationRef index.
      Returns:
      the AnnotationRef property.
    • getInstrumentID

      String getInstrumentID(int instrumentIndex)
      Get the ID property of Instrument.
      Parameters:
      instrumentIndex - the Instrument index.
      Returns:
      the ID property.
    • getLabelAnnotationRef

      String getLabelAnnotationRef(int ROIIndex, int shapeIndex, int annotationRefIndex)
      Get the AnnotationRef property of Label.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      annotationRefIndex - AnnotationRef index.
      Returns:
      the AnnotationRef property.
    • getLabelFillColor

      Color getLabelFillColor(int ROIIndex, int shapeIndex)
      Get the FillColor property of Label.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the FillColor property.
    • getLabelFillRule

      FillRule getLabelFillRule(int ROIIndex, int shapeIndex)
      Get the FillRule property of Label.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the FillRule property.
    • getLabelFontFamily

      FontFamily getLabelFontFamily(int ROIIndex, int shapeIndex)
      Get the FontFamily property of Label.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the FontFamily property.
    • getLabelFontSize

      Length getLabelFontSize(int ROIIndex, int shapeIndex)
      Get the FontSize property of Label.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the FontSize property.
    • getLabelFontStyle

      FontStyle getLabelFontStyle(int ROIIndex, int shapeIndex)
      Get the FontStyle property of Label.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the FontStyle property.
    • getLabelID

      String getLabelID(int ROIIndex, int shapeIndex)
      Get the ID property of Label.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the ID property.
    • getLabelLocked

      Boolean getLabelLocked(int ROIIndex, int shapeIndex)
      Get the Locked property of Label.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the Locked property.
    • getLabelStrokeColor

      Color getLabelStrokeColor(int ROIIndex, int shapeIndex)
      Get the StrokeColor property of Label.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the StrokeColor property.
    • getLabelStrokeDashArray

      String getLabelStrokeDashArray(int ROIIndex, int shapeIndex)
      Get the StrokeDashArray property of Label.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the StrokeDashArray property.
    • getLabelStrokeWidth

      Length getLabelStrokeWidth(int ROIIndex, int shapeIndex)
      Get the StrokeWidth property of Label.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the StrokeWidth property.
    • getLabelText

      String getLabelText(int ROIIndex, int shapeIndex)
      Get the Text property of Label.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the Text property.
    • getLabelTheC

      NonNegativeInteger getLabelTheC(int ROIIndex, int shapeIndex)
      Get the TheC property of Label.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the TheC property.
    • getLabelTheT

      NonNegativeInteger getLabelTheT(int ROIIndex, int shapeIndex)
      Get the TheT property of Label.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the TheT property.
    • getLabelTheZ

      NonNegativeInteger getLabelTheZ(int ROIIndex, int shapeIndex)
      Get the TheZ property of Label.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the TheZ property.
    • getLabelTransform

      AffineTransform getLabelTransform(int ROIIndex, int shapeIndex)
      Get the Transform property of Label.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the Transform property.
    • getLabelX

      Double getLabelX(int ROIIndex, int shapeIndex)
      Get the X property of Label.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the X property.
    • getLabelY

      Double getLabelY(int ROIIndex, int shapeIndex)
      Get the Y property of Label.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the Y property.
    • getLaserAnnotationRef

      String getLaserAnnotationRef(int instrumentIndex, int lightSourceIndex, int annotationRefIndex)
      Get the AnnotationRef property of Laser.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      annotationRefIndex - AnnotationRef index.
      Returns:
      the AnnotationRef property.
    • getLaserFrequencyMultiplication

      PositiveInteger getLaserFrequencyMultiplication(int instrumentIndex, int lightSourceIndex)
      Get the FrequencyMultiplication property of Laser.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      Returns:
      the FrequencyMultiplication property.
    • getLaserID

      String getLaserID(int instrumentIndex, int lightSourceIndex)
      Get the ID property of Laser.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      Returns:
      the ID property.
    • getLaserLaserMedium

      LaserMedium getLaserLaserMedium(int instrumentIndex, int lightSourceIndex)
      Get the LaserMedium property of Laser.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      Returns:
      the LaserMedium property.
    • getLaserLotNumber

      String getLaserLotNumber(int instrumentIndex, int lightSourceIndex)
      Get the LotNumber property of Laser.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      Returns:
      the LotNumber property.
    • getLaserManufacturer

      String getLaserManufacturer(int instrumentIndex, int lightSourceIndex)
      Get the Manufacturer property of Laser.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      Returns:
      the Manufacturer property.
    • getLaserModel

      String getLaserModel(int instrumentIndex, int lightSourceIndex)
      Get the Model property of Laser.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      Returns:
      the Model property.
    • getLaserPockelCell

      Boolean getLaserPockelCell(int instrumentIndex, int lightSourceIndex)
      Get the PockelCell property of Laser.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      Returns:
      the PockelCell property.
    • getLaserPower

      Power getLaserPower(int instrumentIndex, int lightSourceIndex)
      Get the Power property of Laser.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      Returns:
      the Power property.
    • getLaserPulse

      Pulse getLaserPulse(int instrumentIndex, int lightSourceIndex)
      Get the Pulse property of Laser.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      Returns:
      the Pulse property.
    • getLaserPump

      String getLaserPump(int instrumentIndex, int lightSourceIndex)
      Get the Pump property of Laser.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      Returns:
      the Pump property.
    • getLaserRepetitionRate

      Frequency getLaserRepetitionRate(int instrumentIndex, int lightSourceIndex)
      Get the RepetitionRate property of Laser.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      Returns:
      the RepetitionRate property.
    • getLaserSerialNumber

      String getLaserSerialNumber(int instrumentIndex, int lightSourceIndex)
      Get the SerialNumber property of Laser.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      Returns:
      the SerialNumber property.
    • getLaserTuneable

      Boolean getLaserTuneable(int instrumentIndex, int lightSourceIndex)
      Get the Tuneable property of Laser.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      Returns:
      the Tuneable property.
    • getLaserType

      LaserType getLaserType(int instrumentIndex, int lightSourceIndex)
      Get the Type property of Laser.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      Returns:
      the Type property.
    • getLaserWavelength

      Length getLaserWavelength(int instrumentIndex, int lightSourceIndex)
      Get the Wavelength property of Laser.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      Returns:
      the Wavelength property.
    • getLightEmittingDiodeAnnotationRef

      String getLightEmittingDiodeAnnotationRef(int instrumentIndex, int lightSourceIndex, int annotationRefIndex)
      Get the AnnotationRef property of LightEmittingDiode.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      annotationRefIndex - AnnotationRef index.
      Returns:
      the AnnotationRef property.
    • getLightEmittingDiodeID

      String getLightEmittingDiodeID(int instrumentIndex, int lightSourceIndex)
      Get the ID property of LightEmittingDiode.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      Returns:
      the ID property.
    • getLightEmittingDiodeLotNumber

      String getLightEmittingDiodeLotNumber(int instrumentIndex, int lightSourceIndex)
      Get the LotNumber property of LightEmittingDiode.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      Returns:
      the LotNumber property.
    • getLightEmittingDiodeManufacturer

      String getLightEmittingDiodeManufacturer(int instrumentIndex, int lightSourceIndex)
      Get the Manufacturer property of LightEmittingDiode.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      Returns:
      the Manufacturer property.
    • getLightEmittingDiodeModel

      String getLightEmittingDiodeModel(int instrumentIndex, int lightSourceIndex)
      Get the Model property of LightEmittingDiode.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      Returns:
      the Model property.
    • getLightEmittingDiodePower

      Power getLightEmittingDiodePower(int instrumentIndex, int lightSourceIndex)
      Get the Power property of LightEmittingDiode.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      Returns:
      the Power property.
    • getLightEmittingDiodeSerialNumber

      String getLightEmittingDiodeSerialNumber(int instrumentIndex, int lightSourceIndex)
      Get the SerialNumber property of LightEmittingDiode.
      Parameters:
      instrumentIndex - the Instrument index.
      lightSourceIndex - the LightSource index.
      Returns:
      the SerialNumber property.
    • getLightPathAnnotationRef

      String getLightPathAnnotationRef(int imageIndex, int channelIndex, int annotationRefIndex)
      Get the AnnotationRef property of LightPath.
      Parameters:
      imageIndex - the Image index.
      channelIndex - the Channel index.
      annotationRefIndex - AnnotationRef index.
      Returns:
      the AnnotationRef property.
    • getLightPathDichroicRef

      String getLightPathDichroicRef(int imageIndex, int channelIndex)
      Get the DichroicRef property of LightPath.
      Parameters:
      imageIndex - the Image index.
      channelIndex - the Channel index.
      Returns:
      the DichroicRef property.
    • getLightPathEmissionFilterRef

      String getLightPathEmissionFilterRef(int imageIndex, int channelIndex, int emissionFilterRefIndex)
      Get the EmissionFilterRef property of LightPath.
      Parameters:
      imageIndex - the Image index.
      channelIndex - the Channel index.
      emissionFilterRefIndex - EmissionFilterRef index.
      Returns:
      the EmissionFilterRef property.
    • getLightPathExcitationFilterRef

      String getLightPathExcitationFilterRef(int imageIndex, int channelIndex, int excitationFilterRefIndex)
      Get the ExcitationFilterRef property of LightPath.
      Parameters:
      imageIndex - the Image index.
      channelIndex - the Channel index.
      excitationFilterRefIndex - ExcitationFilterRef index.
      Returns:
      the ExcitationFilterRef property.
    • getChannelLightSourceSettingsAttenuation

      PercentFraction getChannelLightSourceSettingsAttenuation(int imageIndex, int channelIndex)
      Get the Attenuation property of LightSourceSettings.
      Parameters:
      imageIndex - the Image index.
      channelIndex - the Channel index.
      Returns:
      the Attenuation property.
    • getMicrobeamManipulationLightSourceSettingsAttenuation

      PercentFraction getMicrobeamManipulationLightSourceSettingsAttenuation(int experimentIndex, int microbeamManipulationIndex, int lightSourceSettingsIndex)
      Get the Attenuation property of LightSourceSettings.
      Parameters:
      experimentIndex - the Experiment index.
      microbeamManipulationIndex - the MicrobeamManipulation index.
      lightSourceSettingsIndex - the LightSourceSettings index.
      Returns:
      the Attenuation property.
    • getChannelLightSourceSettingsID

      String getChannelLightSourceSettingsID(int imageIndex, int channelIndex)
      Get the ID property of LightSourceSettings.
      Parameters:
      imageIndex - the Image index.
      channelIndex - the Channel index.
      Returns:
      the ID property.
    • getMicrobeamManipulationLightSourceSettingsID

      String getMicrobeamManipulationLightSourceSettingsID(int experimentIndex, int microbeamManipulationIndex, int lightSourceSettingsIndex)
      Get the ID property of LightSourceSettings.
      Parameters:
      experimentIndex - the Experiment index.
      microbeamManipulationIndex - the MicrobeamManipulation index.
      lightSourceSettingsIndex - the LightSourceSettings index.
      Returns:
      the ID property.
    • getChannelLightSourceSettingsWavelength

      Length getChannelLightSourceSettingsWavelength(int imageIndex, int channelIndex)
      Get the Wavelength property of LightSourceSettings.
      Parameters:
      imageIndex - the Image index.
      channelIndex - the Channel index.
      Returns:
      the Wavelength property.
    • getMicrobeamManipulationLightSourceSettingsWavelength

      Length getMicrobeamManipulationLightSourceSettingsWavelength(int experimentIndex, int microbeamManipulationIndex, int lightSourceSettingsIndex)
      Get the Wavelength property of LightSourceSettings.
      Parameters:
      experimentIndex - the Experiment index.
      microbeamManipulationIndex - the MicrobeamManipulation index.
      lightSourceSettingsIndex - the LightSourceSettings index.
      Returns:
      the Wavelength property.
    • getLineAnnotationRef

      String getLineAnnotationRef(int ROIIndex, int shapeIndex, int annotationRefIndex)
      Get the AnnotationRef property of Line.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      annotationRefIndex - AnnotationRef index.
      Returns:
      the AnnotationRef property.
    • getLineFillColor

      Color getLineFillColor(int ROIIndex, int shapeIndex)
      Get the FillColor property of Line.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the FillColor property.
    • getLineFillRule

      FillRule getLineFillRule(int ROIIndex, int shapeIndex)
      Get the FillRule property of Line.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the FillRule property.
    • getLineFontFamily

      FontFamily getLineFontFamily(int ROIIndex, int shapeIndex)
      Get the FontFamily property of Line.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the FontFamily property.
    • getLineFontSize

      Length getLineFontSize(int ROIIndex, int shapeIndex)
      Get the FontSize property of Line.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the FontSize property.
    • getLineFontStyle

      FontStyle getLineFontStyle(int ROIIndex, int shapeIndex)
      Get the FontStyle property of Line.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the FontStyle property.
    • getLineID

      String getLineID(int ROIIndex, int shapeIndex)
      Get the ID property of Line.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the ID property.
    • getLineLocked

      Boolean getLineLocked(int ROIIndex, int shapeIndex)
      Get the Locked property of Line.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the Locked property.
    • getLineMarkerEnd

      Marker getLineMarkerEnd(int ROIIndex, int shapeIndex)
      Get the MarkerEnd property of Line.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the MarkerEnd property.
    • getLineMarkerStart

      Marker getLineMarkerStart(int ROIIndex, int shapeIndex)
      Get the MarkerStart property of Line.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the MarkerStart property.
    • getLineStrokeColor

      Color getLineStrokeColor(int ROIIndex, int shapeIndex)
      Get the StrokeColor property of Line.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the StrokeColor property.
    • getLineStrokeDashArray

      String getLineStrokeDashArray(int ROIIndex, int shapeIndex)
      Get the StrokeDashArray property of Line.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the StrokeDashArray property.
    • getLineStrokeWidth

      Length getLineStrokeWidth(int ROIIndex, int shapeIndex)
      Get the StrokeWidth property of Line.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the StrokeWidth property.
    • getLineText

      String getLineText(int ROIIndex, int shapeIndex)
      Get the Text property of Line.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the Text property.
    • getLineTheC

      NonNegativeInteger getLineTheC(int ROIIndex, int shapeIndex)
      Get the TheC property of Line.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the TheC property.
    • getLineTheT

      NonNegativeInteger getLineTheT(int ROIIndex, int shapeIndex)
      Get the TheT property of Line.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the TheT property.
    • getLineTheZ

      NonNegativeInteger getLineTheZ(int ROIIndex, int shapeIndex)
      Get the TheZ property of Line.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the TheZ property.
    • getLineTransform

      AffineTransform getLineTransform(int ROIIndex, int shapeIndex)
      Get the Transform property of Line.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the Transform property.
    • getLineX1

      Double getLineX1(int ROIIndex, int shapeIndex)
      Get the X1 property of Line.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the X1 property.
    • getLineX2

      Double getLineX2(int ROIIndex, int shapeIndex)
      Get the X2 property of Line.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the X2 property.
    • getLineY1

      Double getLineY1(int ROIIndex, int shapeIndex)
      Get the Y1 property of Line.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the Y1 property.
    • getLineY2

      Double getLineY2(int ROIIndex, int shapeIndex)
      Get the Y2 property of Line.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the Y2 property.
    • getListAnnotationAnnotationRef

      String getListAnnotationAnnotationRef(int listAnnotationIndex, int annotationRefIndex)
      Get the AnnotationRef property of ListAnnotation.
      Parameters:
      listAnnotationIndex - the ListAnnotation index.
      annotationRefIndex - AnnotationRef index.
      Returns:
      the AnnotationRef property.
    • getListAnnotationAnnotator

      String getListAnnotationAnnotator(int listAnnotationIndex)
      Get the Annotator property of ListAnnotation.
      Parameters:
      listAnnotationIndex - the ListAnnotation index.
      Returns:
      the Annotator property.
    • getListAnnotationDescription

      String getListAnnotationDescription(int listAnnotationIndex)
      Get the Description property of ListAnnotation.
      Parameters:
      listAnnotationIndex - the ListAnnotation index.
      Returns:
      the Description property.
    • getListAnnotationID

      String getListAnnotationID(int listAnnotationIndex)
      Get the ID property of ListAnnotation.
      Parameters:
      listAnnotationIndex - the ListAnnotation index.
      Returns:
      the ID property.
    • getListAnnotationNamespace

      String getListAnnotationNamespace(int listAnnotationIndex)
      Get the Namespace property of ListAnnotation.
      Parameters:
      listAnnotationIndex - the ListAnnotation index.
      Returns:
      the Namespace property.
    • getLongAnnotationAnnotationRef

      String getLongAnnotationAnnotationRef(int longAnnotationIndex, int annotationRefIndex)
      Get the AnnotationRef property of LongAnnotation.
      Parameters:
      longAnnotationIndex - the LongAnnotation index.
      annotationRefIndex - AnnotationRef index.
      Returns:
      the AnnotationRef property.
    • getLongAnnotationAnnotator

      String getLongAnnotationAnnotator(int longAnnotationIndex)
      Get the Annotator property of LongAnnotation.
      Parameters:
      longAnnotationIndex - the LongAnnotation index.
      Returns:
      the Annotator property.
    • getLongAnnotationDescription

      String getLongAnnotationDescription(int longAnnotationIndex)
      Get the Description property of LongAnnotation.
      Parameters:
      longAnnotationIndex - the LongAnnotation index.
      Returns:
      the Description property.
    • getLongAnnotationID

      String getLongAnnotationID(int longAnnotationIndex)
      Get the ID property of LongAnnotation.
      Parameters:
      longAnnotationIndex - the LongAnnotation index.
      Returns:
      the ID property.
    • getLongAnnotationNamespace

      String getLongAnnotationNamespace(int longAnnotationIndex)
      Get the Namespace property of LongAnnotation.
      Parameters:
      longAnnotationIndex - the LongAnnotation index.
      Returns:
      the Namespace property.
    • getLongAnnotationValue

      Long getLongAnnotationValue(int longAnnotationIndex)
      Get the Value property of LongAnnotation.
      Parameters:
      longAnnotationIndex - the LongAnnotation index.
      Returns:
      the Value property.
    • getMapAnnotationAnnotationRef

      String getMapAnnotationAnnotationRef(int mapAnnotationIndex, int annotationRefIndex)
      Get the AnnotationRef property of MapAnnotation.
      Parameters:
      mapAnnotationIndex - the MapAnnotation index.
      annotationRefIndex - AnnotationRef index.
      Returns:
      the AnnotationRef property.
    • getMapAnnotationAnnotator

      String getMapAnnotationAnnotator(int mapAnnotationIndex)
      Get the Annotator property of MapAnnotation.
      Parameters:
      mapAnnotationIndex - the MapAnnotation index.
      Returns:
      the Annotator property.
    • getMapAnnotationDescription

      String getMapAnnotationDescription(int mapAnnotationIndex)
      Get the Description property of MapAnnotation.
      Parameters:
      mapAnnotationIndex - the MapAnnotation index.
      Returns:
      the Description property.
    • getMapAnnotationID

      String getMapAnnotationID(int mapAnnotationIndex)
      Get the ID property of MapAnnotation.
      Parameters:
      mapAnnotationIndex - the MapAnnotation index.
      Returns:
      the ID property.
    • getMapAnnotationNamespace

      String getMapAnnotationNamespace(int mapAnnotationIndex)
      Get the Namespace property of MapAnnotation.
      Parameters:
      mapAnnotationIndex - the MapAnnotation index.
      Returns:
      the Namespace property.
    • getMaskAnnotationRef

      String getMaskAnnotationRef(int ROIIndex, int shapeIndex, int annotationRefIndex)
      Get the AnnotationRef property of Mask.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      annotationRefIndex - AnnotationRef index.
      Returns:
      the AnnotationRef property.
    • getMaskFillColor

      Color getMaskFillColor(int ROIIndex, int shapeIndex)
      Get the FillColor property of Mask.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the FillColor property.
    • getMaskFillRule

      FillRule getMaskFillRule(int ROIIndex, int shapeIndex)
      Get the FillRule property of Mask.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the FillRule property.
    • getMaskFontFamily

      FontFamily getMaskFontFamily(int ROIIndex, int shapeIndex)
      Get the FontFamily property of Mask.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the FontFamily property.
    • getMaskFontSize

      Length getMaskFontSize(int ROIIndex, int shapeIndex)
      Get the FontSize property of Mask.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the FontSize property.
    • getMaskFontStyle

      FontStyle getMaskFontStyle(int ROIIndex, int shapeIndex)
      Get the FontStyle property of Mask.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the FontStyle property.
    • getMaskHeight

      Double getMaskHeight(int ROIIndex, int shapeIndex)
      Get the Height property of Mask.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the Height property.
    • getMaskID

      String getMaskID(int ROIIndex, int shapeIndex)
      Get the ID property of Mask.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the ID property.
    • getMaskLocked

      Boolean getMaskLocked(int ROIIndex, int shapeIndex)
      Get the Locked property of Mask.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the Locked property.
    • getMaskStrokeColor

      Color getMaskStrokeColor(int ROIIndex, int shapeIndex)
      Get the StrokeColor property of Mask.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the StrokeColor property.
    • getMaskStrokeDashArray

      String getMaskStrokeDashArray(int ROIIndex, int shapeIndex)
      Get the StrokeDashArray property of Mask.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the StrokeDashArray property.
    • getMaskStrokeWidth

      Length getMaskStrokeWidth(int ROIIndex, int shapeIndex)
      Get the StrokeWidth property of Mask.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the StrokeWidth property.
    • getMaskText

      String getMaskText(int ROIIndex, int shapeIndex)
      Get the Text property of Mask.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the Text property.
    • getMaskTheC

      NonNegativeInteger getMaskTheC(int ROIIndex, int shapeIndex)
      Get the TheC property of Mask.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the TheC property.
    • getMaskTheT

      NonNegativeInteger getMaskTheT(int ROIIndex, int shapeIndex)
      Get the TheT property of Mask.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the TheT property.
    • getMaskTheZ

      NonNegativeInteger getMaskTheZ(int ROIIndex, int shapeIndex)
      Get the TheZ property of Mask.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the TheZ property.
    • getMaskTransform

      AffineTransform getMaskTransform(int ROIIndex, int shapeIndex)
      Get the Transform property of Mask.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the Transform property.
    • getMaskWidth

      Double getMaskWidth(int ROIIndex, int shapeIndex)
      Get the Width property of Mask.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the Width property.
    • getMaskX

      Double getMaskX(int ROIIndex, int shapeIndex)
      Get the X property of Mask.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the X property.
    • getMaskY

      Double getMaskY(int ROIIndex, int shapeIndex)
      Get the Y property of Mask.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the Y property.
    • getMicrobeamManipulationDescription

      String getMicrobeamManipulationDescription(int experimentIndex, int microbeamManipulationIndex)
      Get the Description property of MicrobeamManipulation.
      Parameters:
      experimentIndex - the Experiment index.
      microbeamManipulationIndex - the MicrobeamManipulation index.
      Returns:
      the Description property.
    • getMicrobeamManipulationExperimenterRef

      String getMicrobeamManipulationExperimenterRef(int experimentIndex, int microbeamManipulationIndex)
      Get the ExperimenterRef property of MicrobeamManipulation.
      Parameters:
      experimentIndex - the Experiment index.
      microbeamManipulationIndex - the MicrobeamManipulation index.
      Returns:
      the ExperimenterRef property.
    • getMicrobeamManipulationID

      String getMicrobeamManipulationID(int experimentIndex, int microbeamManipulationIndex)
      Get the ID property of MicrobeamManipulation.
      Parameters:
      experimentIndex - the Experiment index.
      microbeamManipulationIndex - the MicrobeamManipulation index.
      Returns:
      the ID property.
    • getMicrobeamManipulationROIRef

      String getMicrobeamManipulationROIRef(int experimentIndex, int microbeamManipulationIndex, int ROIRefIndex)
      Get the ROIRef property of MicrobeamManipulation.
      Parameters:
      experimentIndex - the Experiment index.
      microbeamManipulationIndex - the MicrobeamManipulation index.
      ROIRefIndex - ROIRef index.
      Returns:
      the ROIRef property.
    • getMicrobeamManipulationType

      MicrobeamManipulationType getMicrobeamManipulationType(int experimentIndex, int microbeamManipulationIndex)
      Get the Type property of MicrobeamManipulation.
      Parameters:
      experimentIndex - the Experiment index.
      microbeamManipulationIndex - the MicrobeamManipulation index.
      Returns:
      the Type property.
    • getMicroscopeLotNumber

      String getMicroscopeLotNumber(int instrumentIndex)
      Get the LotNumber property of Microscope.
      Parameters:
      instrumentIndex - the Instrument index.
      Returns:
      the LotNumber property.
    • getMicroscopeManufacturer

      String getMicroscopeManufacturer(int instrumentIndex)
      Get the Manufacturer property of Microscope.
      Parameters:
      instrumentIndex - the Instrument index.
      Returns:
      the Manufacturer property.
    • getMicroscopeModel

      String getMicroscopeModel(int instrumentIndex)
      Get the Model property of Microscope.
      Parameters:
      instrumentIndex - the Instrument index.
      Returns:
      the Model property.
    • getMicroscopeSerialNumber

      String getMicroscopeSerialNumber(int instrumentIndex)
      Get the SerialNumber property of Microscope.
      Parameters:
      instrumentIndex - the Instrument index.
      Returns:
      the SerialNumber property.
    • getMicroscopeType

      MicroscopeType getMicroscopeType(int instrumentIndex)
      Get the Type property of Microscope.
      Parameters:
      instrumentIndex - the Instrument index.
      Returns:
      the Type property.
    • getObjectiveAnnotationRef

      String getObjectiveAnnotationRef(int instrumentIndex, int objectiveIndex, int annotationRefIndex)
      Get the AnnotationRef property of Objective.
      Parameters:
      instrumentIndex - the Instrument index.
      objectiveIndex - the Objective index.
      annotationRefIndex - AnnotationRef index.
      Returns:
      the AnnotationRef property.
    • getObjectiveCalibratedMagnification

      Double getObjectiveCalibratedMagnification(int instrumentIndex, int objectiveIndex)
      Get the CalibratedMagnification property of Objective.
      Parameters:
      instrumentIndex - the Instrument index.
      objectiveIndex - the Objective index.
      Returns:
      the CalibratedMagnification property.
    • getObjectiveCorrection

      Correction getObjectiveCorrection(int instrumentIndex, int objectiveIndex)
      Get the Correction property of Objective.
      Parameters:
      instrumentIndex - the Instrument index.
      objectiveIndex - the Objective index.
      Returns:
      the Correction property.
    • getObjectiveID

      String getObjectiveID(int instrumentIndex, int objectiveIndex)
      Get the ID property of Objective.
      Parameters:
      instrumentIndex - the Instrument index.
      objectiveIndex - the Objective index.
      Returns:
      the ID property.
    • getObjectiveImmersion

      Immersion getObjectiveImmersion(int instrumentIndex, int objectiveIndex)
      Get the Immersion property of Objective.
      Parameters:
      instrumentIndex - the Instrument index.
      objectiveIndex - the Objective index.
      Returns:
      the Immersion property.
    • getObjectiveIris

      Boolean getObjectiveIris(int instrumentIndex, int objectiveIndex)
      Get the Iris property of Objective.
      Parameters:
      instrumentIndex - the Instrument index.
      objectiveIndex - the Objective index.
      Returns:
      the Iris property.
    • getObjectiveLensNA

      Double getObjectiveLensNA(int instrumentIndex, int objectiveIndex)
      Get the LensNA property of Objective.
      Parameters:
      instrumentIndex - the Instrument index.
      objectiveIndex - the Objective index.
      Returns:
      the LensNA property.
    • getObjectiveLotNumber

      String getObjectiveLotNumber(int instrumentIndex, int objectiveIndex)
      Get the LotNumber property of Objective.
      Parameters:
      instrumentIndex - the Instrument index.
      objectiveIndex - the Objective index.
      Returns:
      the LotNumber property.
    • getObjectiveManufacturer

      String getObjectiveManufacturer(int instrumentIndex, int objectiveIndex)
      Get the Manufacturer property of Objective.
      Parameters:
      instrumentIndex - the Instrument index.
      objectiveIndex - the Objective index.
      Returns:
      the Manufacturer property.
    • getObjectiveModel

      String getObjectiveModel(int instrumentIndex, int objectiveIndex)
      Get the Model property of Objective.
      Parameters:
      instrumentIndex - the Instrument index.
      objectiveIndex - the Objective index.
      Returns:
      the Model property.
    • getObjectiveNominalMagnification

      Double getObjectiveNominalMagnification(int instrumentIndex, int objectiveIndex)
      Get the NominalMagnification property of Objective.
      Parameters:
      instrumentIndex - the Instrument index.
      objectiveIndex - the Objective index.
      Returns:
      the NominalMagnification property.
    • getObjectiveSerialNumber

      String getObjectiveSerialNumber(int instrumentIndex, int objectiveIndex)
      Get the SerialNumber property of Objective.
      Parameters:
      instrumentIndex - the Instrument index.
      objectiveIndex - the Objective index.
      Returns:
      the SerialNumber property.
    • getObjectiveWorkingDistance

      Length getObjectiveWorkingDistance(int instrumentIndex, int objectiveIndex)
      Get the WorkingDistance property of Objective.
      Parameters:
      instrumentIndex - the Instrument index.
      objectiveIndex - the Objective index.
      Returns:
      the WorkingDistance property.
    • getObjectiveSettingsCorrectionCollar

      Double getObjectiveSettingsCorrectionCollar(int imageIndex)
      Get the CorrectionCollar property of ObjectiveSettings.
      Parameters:
      imageIndex - the Image index.
      Returns:
      the CorrectionCollar property.
    • getObjectiveSettingsID

      String getObjectiveSettingsID(int imageIndex)
      Get the ID property of ObjectiveSettings.
      Parameters:
      imageIndex - the Image index.
      Returns:
      the ID property.
    • getObjectiveSettingsMedium

      Medium getObjectiveSettingsMedium(int imageIndex)
      Get the Medium property of ObjectiveSettings.
      Parameters:
      imageIndex - the Image index.
      Returns:
      the Medium property.
    • getObjectiveSettingsRefractiveIndex

      Double getObjectiveSettingsRefractiveIndex(int imageIndex)
      Get the RefractiveIndex property of ObjectiveSettings.
      Parameters:
      imageIndex - the Image index.
      Returns:
      the RefractiveIndex property.
    • getPixelsBigEndian

      Boolean getPixelsBigEndian(int imageIndex)
      Get the BigEndian property of Pixels.
      Parameters:
      imageIndex - the Image index.
      Returns:
      the BigEndian property.
    • getPixelsDimensionOrder

      DimensionOrder getPixelsDimensionOrder(int imageIndex)
      Get the DimensionOrder property of Pixels.
      Parameters:
      imageIndex - the Image index.
      Returns:
      the DimensionOrder property.
    • getPixelsID

      String getPixelsID(int imageIndex)
      Get the ID property of Pixels.
      Parameters:
      imageIndex - the Image index.
      Returns:
      the ID property.
    • getPixelsInterleaved

      Boolean getPixelsInterleaved(int imageIndex)
      Get the Interleaved property of Pixels.
      Parameters:
      imageIndex - the Image index.
      Returns:
      the Interleaved property.
    • getPixelsPhysicalSizeX

      Length getPixelsPhysicalSizeX(int imageIndex)
      Get the PhysicalSizeX property of Pixels.
      Parameters:
      imageIndex - the Image index.
      Returns:
      the PhysicalSizeX property.
    • getPixelsPhysicalSizeY

      Length getPixelsPhysicalSizeY(int imageIndex)
      Get the PhysicalSizeY property of Pixels.
      Parameters:
      imageIndex - the Image index.
      Returns:
      the PhysicalSizeY property.
    • getPixelsPhysicalSizeZ

      Length getPixelsPhysicalSizeZ(int imageIndex)
      Get the PhysicalSizeZ property of Pixels.
      Parameters:
      imageIndex - the Image index.
      Returns:
      the PhysicalSizeZ property.
    • getPixelsSignificantBits

      PositiveInteger getPixelsSignificantBits(int imageIndex)
      Get the SignificantBits property of Pixels.
      Parameters:
      imageIndex - the Image index.
      Returns:
      the SignificantBits property.
    • getPixelsSizeC

      PositiveInteger getPixelsSizeC(int imageIndex)
      Get the SizeC property of Pixels.
      Parameters:
      imageIndex - the Image index.
      Returns:
      the SizeC property.
    • getPixelsSizeT

      PositiveInteger getPixelsSizeT(int imageIndex)
      Get the SizeT property of Pixels.
      Parameters:
      imageIndex - the Image index.
      Returns:
      the SizeT property.
    • getPixelsSizeX

      PositiveInteger getPixelsSizeX(int imageIndex)
      Get the SizeX property of Pixels.
      Parameters:
      imageIndex - the Image index.
      Returns:
      the SizeX property.
    • getPixelsSizeY

      PositiveInteger getPixelsSizeY(int imageIndex)
      Get the SizeY property of Pixels.
      Parameters:
      imageIndex - the Image index.
      Returns:
      the SizeY property.
    • getPixelsSizeZ

      PositiveInteger getPixelsSizeZ(int imageIndex)
      Get the SizeZ property of Pixels.
      Parameters:
      imageIndex - the Image index.
      Returns:
      the SizeZ property.
    • getPixelsTimeIncrement

      Time getPixelsTimeIncrement(int imageIndex)
      Get the TimeIncrement property of Pixels.
      Parameters:
      imageIndex - the Image index.
      Returns:
      the TimeIncrement property.
    • getPixelsType

      PixelType getPixelsType(int imageIndex)
      Get the Type property of Pixels.
      Parameters:
      imageIndex - the Image index.
      Returns:
      the Type property.
    • getPlaneAnnotationRef

      String getPlaneAnnotationRef(int imageIndex, int planeIndex, int annotationRefIndex)
      Get the AnnotationRef property of Plane.
      Parameters:
      imageIndex - the Image index.
      planeIndex - the Plane index.
      annotationRefIndex - AnnotationRef index.
      Returns:
      the AnnotationRef property.
    • getPlaneDeltaT

      Time getPlaneDeltaT(int imageIndex, int planeIndex)
      Get the DeltaT property of Plane.
      Parameters:
      imageIndex - the Image index.
      planeIndex - the Plane index.
      Returns:
      the DeltaT property.
    • getPlaneExposureTime

      Time getPlaneExposureTime(int imageIndex, int planeIndex)
      Get the ExposureTime property of Plane.
      Parameters:
      imageIndex - the Image index.
      planeIndex - the Plane index.
      Returns:
      the ExposureTime property.
    • getPlaneHashSHA1

      String getPlaneHashSHA1(int imageIndex, int planeIndex)
      Get the HashSHA1 property of Plane.
      Parameters:
      imageIndex - the Image index.
      planeIndex - the Plane index.
      Returns:
      the HashSHA1 property.
    • getPlanePositionX

      Length getPlanePositionX(int imageIndex, int planeIndex)
      Get the PositionX property of Plane.
      Parameters:
      imageIndex - the Image index.
      planeIndex - the Plane index.
      Returns:
      the PositionX property.
    • getPlanePositionY

      Length getPlanePositionY(int imageIndex, int planeIndex)
      Get the PositionY property of Plane.
      Parameters:
      imageIndex - the Image index.
      planeIndex - the Plane index.
      Returns:
      the PositionY property.
    • getPlanePositionZ

      Length getPlanePositionZ(int imageIndex, int planeIndex)
      Get the PositionZ property of Plane.
      Parameters:
      imageIndex - the Image index.
      planeIndex - the Plane index.
      Returns:
      the PositionZ property.
    • getPlaneTheC

      NonNegativeInteger getPlaneTheC(int imageIndex, int planeIndex)
      Get the TheC property of Plane.
      Parameters:
      imageIndex - the Image index.
      planeIndex - the Plane index.
      Returns:
      the TheC property.
    • getPlaneTheT

      NonNegativeInteger getPlaneTheT(int imageIndex, int planeIndex)
      Get the TheT property of Plane.
      Parameters:
      imageIndex - the Image index.
      planeIndex - the Plane index.
      Returns:
      the TheT property.
    • getPlaneTheZ

      NonNegativeInteger getPlaneTheZ(int imageIndex, int planeIndex)
      Get the TheZ property of Plane.
      Parameters:
      imageIndex - the Image index.
      planeIndex - the Plane index.
      Returns:
      the TheZ property.
    • getPlateAnnotationRef

      String getPlateAnnotationRef(int plateIndex, int annotationRefIndex)
      Get the AnnotationRef property of Plate.
      Parameters:
      plateIndex - the Plate index.
      annotationRefIndex - AnnotationRef index.
      Returns:
      the AnnotationRef property.
    • getPlateColumnNamingConvention

      NamingConvention getPlateColumnNamingConvention(int plateIndex)
      Get the ColumnNamingConvention property of Plate.
      Parameters:
      plateIndex - the Plate index.
      Returns:
      the ColumnNamingConvention property.
    • getPlateColumns

      PositiveInteger getPlateColumns(int plateIndex)
      Get the Columns property of Plate.
      Parameters:
      plateIndex - the Plate index.
      Returns:
      the Columns property.
    • getPlateDescription

      String getPlateDescription(int plateIndex)
      Get the Description property of Plate.
      Parameters:
      plateIndex - the Plate index.
      Returns:
      the Description property.
    • getPlateExternalIdentifier

      String getPlateExternalIdentifier(int plateIndex)
      Get the ExternalIdentifier property of Plate.
      Parameters:
      plateIndex - the Plate index.
      Returns:
      the ExternalIdentifier property.
    • getPlateFieldIndex

      NonNegativeInteger getPlateFieldIndex(int plateIndex)
      Get the FieldIndex property of Plate.
      Parameters:
      plateIndex - the Plate index.
      Returns:
      the FieldIndex property.
    • getPlateID

      String getPlateID(int plateIndex)
      Get the ID property of Plate.
      Parameters:
      plateIndex - the Plate index.
      Returns:
      the ID property.
    • getPlateName

      String getPlateName(int plateIndex)
      Get the Name property of Plate.
      Parameters:
      plateIndex - the Plate index.
      Returns:
      the Name property.
    • getPlateRowNamingConvention

      NamingConvention getPlateRowNamingConvention(int plateIndex)
      Get the RowNamingConvention property of Plate.
      Parameters:
      plateIndex - the Plate index.
      Returns:
      the RowNamingConvention property.
    • getPlateRows

      PositiveInteger getPlateRows(int plateIndex)
      Get the Rows property of Plate.
      Parameters:
      plateIndex - the Plate index.
      Returns:
      the Rows property.
    • getPlateStatus

      String getPlateStatus(int plateIndex)
      Get the Status property of Plate.
      Parameters:
      plateIndex - the Plate index.
      Returns:
      the Status property.
    • getPlateWellOriginX

      Length getPlateWellOriginX(int plateIndex)
      Get the WellOriginX property of Plate.
      Parameters:
      plateIndex - the Plate index.
      Returns:
      the WellOriginX property.
    • getPlateWellOriginY

      Length getPlateWellOriginY(int plateIndex)
      Get the WellOriginY property of Plate.
      Parameters:
      plateIndex - the Plate index.
      Returns:
      the WellOriginY property.
    • getPlateAcquisitionAnnotationRef

      String getPlateAcquisitionAnnotationRef(int plateIndex, int plateAcquisitionIndex, int annotationRefIndex)
      Get the AnnotationRef property of PlateAcquisition.
      Parameters:
      plateIndex - the Plate index.
      plateAcquisitionIndex - the PlateAcquisition index.
      annotationRefIndex - AnnotationRef index.
      Returns:
      the AnnotationRef property.
    • getPlateAcquisitionDescription

      String getPlateAcquisitionDescription(int plateIndex, int plateAcquisitionIndex)
      Get the Description property of PlateAcquisition.
      Parameters:
      plateIndex - the Plate index.
      plateAcquisitionIndex - the PlateAcquisition index.
      Returns:
      the Description property.
    • getPlateAcquisitionEndTime

      Timestamp getPlateAcquisitionEndTime(int plateIndex, int plateAcquisitionIndex)
      Get the EndTime property of PlateAcquisition.
      Parameters:
      plateIndex - the Plate index.
      plateAcquisitionIndex - the PlateAcquisition index.
      Returns:
      the EndTime property.
    • getPlateAcquisitionID

      String getPlateAcquisitionID(int plateIndex, int plateAcquisitionIndex)
      Get the ID property of PlateAcquisition.
      Parameters:
      plateIndex - the Plate index.
      plateAcquisitionIndex - the PlateAcquisition index.
      Returns:
      the ID property.
    • getPlateAcquisitionMaximumFieldCount

      PositiveInteger getPlateAcquisitionMaximumFieldCount(int plateIndex, int plateAcquisitionIndex)
      Get the MaximumFieldCount property of PlateAcquisition.
      Parameters:
      plateIndex - the Plate index.
      plateAcquisitionIndex - the PlateAcquisition index.
      Returns:
      the MaximumFieldCount property.
    • getPlateAcquisitionName

      String getPlateAcquisitionName(int plateIndex, int plateAcquisitionIndex)
      Get the Name property of PlateAcquisition.
      Parameters:
      plateIndex - the Plate index.
      plateAcquisitionIndex - the PlateAcquisition index.
      Returns:
      the Name property.
    • getPlateAcquisitionStartTime

      Timestamp getPlateAcquisitionStartTime(int plateIndex, int plateAcquisitionIndex)
      Get the StartTime property of PlateAcquisition.
      Parameters:
      plateIndex - the Plate index.
      plateAcquisitionIndex - the PlateAcquisition index.
      Returns:
      the StartTime property.
    • getPlateAcquisitionWellSampleRef

      String getPlateAcquisitionWellSampleRef(int plateIndex, int plateAcquisitionIndex, int wellSampleRefIndex)
      Get the WellSampleRef property of PlateAcquisition.
      Parameters:
      plateIndex - the Plate index.
      plateAcquisitionIndex - the PlateAcquisition index.
      wellSampleRefIndex - WellSampleRef index.
      Returns:
      the WellSampleRef property.
    • getPointAnnotationRef

      String getPointAnnotationRef(int ROIIndex, int shapeIndex, int annotationRefIndex)
      Get the AnnotationRef property of Point.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      annotationRefIndex - AnnotationRef index.
      Returns:
      the AnnotationRef property.
    • getPointFillColor

      Color getPointFillColor(int ROIIndex, int shapeIndex)
      Get the FillColor property of Point.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the FillColor property.
    • getPointFillRule

      FillRule getPointFillRule(int ROIIndex, int shapeIndex)
      Get the FillRule property of Point.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the FillRule property.
    • getPointFontFamily

      FontFamily getPointFontFamily(int ROIIndex, int shapeIndex)
      Get the FontFamily property of Point.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the FontFamily property.
    • getPointFontSize

      Length getPointFontSize(int ROIIndex, int shapeIndex)
      Get the FontSize property of Point.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the FontSize property.
    • getPointFontStyle

      FontStyle getPointFontStyle(int ROIIndex, int shapeIndex)
      Get the FontStyle property of Point.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the FontStyle property.
    • getPointID

      String getPointID(int ROIIndex, int shapeIndex)
      Get the ID property of Point.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the ID property.
    • getPointLocked

      Boolean getPointLocked(int ROIIndex, int shapeIndex)
      Get the Locked property of Point.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the Locked property.
    • getPointStrokeColor

      Color getPointStrokeColor(int ROIIndex, int shapeIndex)
      Get the StrokeColor property of Point.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the StrokeColor property.
    • getPointStrokeDashArray

      String getPointStrokeDashArray(int ROIIndex, int shapeIndex)
      Get the StrokeDashArray property of Point.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the StrokeDashArray property.
    • getPointStrokeWidth

      Length getPointStrokeWidth(int ROIIndex, int shapeIndex)
      Get the StrokeWidth property of Point.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the StrokeWidth property.
    • getPointText

      String getPointText(int ROIIndex, int shapeIndex)
      Get the Text property of Point.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the Text property.
    • getPointTheC

      NonNegativeInteger getPointTheC(int ROIIndex, int shapeIndex)
      Get the TheC property of Point.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the TheC property.
    • getPointTheT

      NonNegativeInteger getPointTheT(int ROIIndex, int shapeIndex)
      Get the TheT property of Point.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the TheT property.
    • getPointTheZ

      NonNegativeInteger getPointTheZ(int ROIIndex, int shapeIndex)
      Get the TheZ property of Point.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the TheZ property.
    • getPointTransform

      AffineTransform getPointTransform(int ROIIndex, int shapeIndex)
      Get the Transform property of Point.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the Transform property.
    • getPointX

      Double getPointX(int ROIIndex, int shapeIndex)
      Get the X property of Point.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the X property.
    • getPointY

      Double getPointY(int ROIIndex, int shapeIndex)
      Get the Y property of Point.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the Y property.
    • getPolygonAnnotationRef

      String getPolygonAnnotationRef(int ROIIndex, int shapeIndex, int annotationRefIndex)
      Get the AnnotationRef property of Polygon.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      annotationRefIndex - AnnotationRef index.
      Returns:
      the AnnotationRef property.
    • getPolygonFillColor

      Color getPolygonFillColor(int ROIIndex, int shapeIndex)
      Get the FillColor property of Polygon.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the FillColor property.
    • getPolygonFillRule

      FillRule getPolygonFillRule(int ROIIndex, int shapeIndex)
      Get the FillRule property of Polygon.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the FillRule property.
    • getPolygonFontFamily

      FontFamily getPolygonFontFamily(int ROIIndex, int shapeIndex)
      Get the FontFamily property of Polygon.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the FontFamily property.
    • getPolygonFontSize

      Length getPolygonFontSize(int ROIIndex, int shapeIndex)
      Get the FontSize property of Polygon.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the FontSize property.
    • getPolygonFontStyle

      FontStyle getPolygonFontStyle(int ROIIndex, int shapeIndex)
      Get the FontStyle property of Polygon.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the FontStyle property.
    • getPolygonID

      String getPolygonID(int ROIIndex, int shapeIndex)
      Get the ID property of Polygon.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the ID property.
    • getPolygonLocked

      Boolean getPolygonLocked(int ROIIndex, int shapeIndex)
      Get the Locked property of Polygon.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the Locked property.
    • getPolygonPoints

      String getPolygonPoints(int ROIIndex, int shapeIndex)
      Get the Points property of Polygon.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the Points property.
    • getPolygonStrokeColor

      Color getPolygonStrokeColor(int ROIIndex, int shapeIndex)
      Get the StrokeColor property of Polygon.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the StrokeColor property.
    • getPolygonStrokeDashArray

      String getPolygonStrokeDashArray(int ROIIndex, int shapeIndex)
      Get the StrokeDashArray property of Polygon.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the StrokeDashArray property.
    • getPolygonStrokeWidth

      Length getPolygonStrokeWidth(int ROIIndex, int shapeIndex)
      Get the StrokeWidth property of Polygon.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the StrokeWidth property.
    • getPolygonText

      String getPolygonText(int ROIIndex, int shapeIndex)
      Get the Text property of Polygon.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the Text property.
    • getPolygonTheC

      NonNegativeInteger getPolygonTheC(int ROIIndex, int shapeIndex)
      Get the TheC property of Polygon.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the TheC property.
    • getPolygonTheT

      NonNegativeInteger getPolygonTheT(int ROIIndex, int shapeIndex)
      Get the TheT property of Polygon.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the TheT property.
    • getPolygonTheZ

      NonNegativeInteger getPolygonTheZ(int ROIIndex, int shapeIndex)
      Get the TheZ property of Polygon.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the TheZ property.
    • getPolygonTransform

      AffineTransform getPolygonTransform(int ROIIndex, int shapeIndex)
      Get the Transform property of Polygon.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the Transform property.
    • getPolylineAnnotationRef

      String getPolylineAnnotationRef(int ROIIndex, int shapeIndex, int annotationRefIndex)
      Get the AnnotationRef property of Polyline.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      annotationRefIndex - AnnotationRef index.
      Returns:
      the AnnotationRef property.
    • getPolylineFillColor

      Color getPolylineFillColor(int ROIIndex, int shapeIndex)
      Get the FillColor property of Polyline.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the FillColor property.
    • getPolylineFillRule

      FillRule getPolylineFillRule(int ROIIndex, int shapeIndex)
      Get the FillRule property of Polyline.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the FillRule property.
    • getPolylineFontFamily

      FontFamily getPolylineFontFamily(int ROIIndex, int shapeIndex)
      Get the FontFamily property of Polyline.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the FontFamily property.
    • getPolylineFontSize

      Length getPolylineFontSize(int ROIIndex, int shapeIndex)
      Get the FontSize property of Polyline.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the FontSize property.
    • getPolylineFontStyle

      FontStyle getPolylineFontStyle(int ROIIndex, int shapeIndex)
      Get the FontStyle property of Polyline.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the FontStyle property.
    • getPolylineID

      String getPolylineID(int ROIIndex, int shapeIndex)
      Get the ID property of Polyline.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the ID property.
    • getPolylineLocked

      Boolean getPolylineLocked(int ROIIndex, int shapeIndex)
      Get the Locked property of Polyline.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the Locked property.
    • getPolylineMarkerEnd

      Marker getPolylineMarkerEnd(int ROIIndex, int shapeIndex)
      Get the MarkerEnd property of Polyline.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the MarkerEnd property.
    • getPolylineMarkerStart

      Marker getPolylineMarkerStart(int ROIIndex, int shapeIndex)
      Get the MarkerStart property of Polyline.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the MarkerStart property.
    • getPolylinePoints

      String getPolylinePoints(int ROIIndex, int shapeIndex)
      Get the Points property of Polyline.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the Points property.
    • getPolylineStrokeColor

      Color getPolylineStrokeColor(int ROIIndex, int shapeIndex)
      Get the StrokeColor property of Polyline.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the StrokeColor property.
    • getPolylineStrokeDashArray

      String getPolylineStrokeDashArray(int ROIIndex, int shapeIndex)
      Get the StrokeDashArray property of Polyline.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the StrokeDashArray property.
    • getPolylineStrokeWidth

      Length getPolylineStrokeWidth(int ROIIndex, int shapeIndex)
      Get the StrokeWidth property of Polyline.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the StrokeWidth property.
    • getPolylineText

      String getPolylineText(int ROIIndex, int shapeIndex)
      Get the Text property of Polyline.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the Text property.
    • getPolylineTheC

      NonNegativeInteger getPolylineTheC(int ROIIndex, int shapeIndex)
      Get the TheC property of Polyline.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the TheC property.
    • getPolylineTheT

      NonNegativeInteger getPolylineTheT(int ROIIndex, int shapeIndex)
      Get the TheT property of Polyline.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the TheT property.
    • getPolylineTheZ

      NonNegativeInteger getPolylineTheZ(int ROIIndex, int shapeIndex)
      Get the TheZ property of Polyline.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the TheZ property.
    • getPolylineTransform

      AffineTransform getPolylineTransform(int ROIIndex, int shapeIndex)
      Get the Transform property of Polyline.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the Transform property.
    • getProjectAnnotationRef

      String getProjectAnnotationRef(int projectIndex, int annotationRefIndex)
      Get the AnnotationRef property of Project.
      Parameters:
      projectIndex - the Project index.
      annotationRefIndex - AnnotationRef index.
      Returns:
      the AnnotationRef property.
    • getProjectDatasetRef

      String getProjectDatasetRef(int projectIndex, int datasetRefIndex)
      Get the DatasetRef property of Project.
      Parameters:
      projectIndex - the Project index.
      datasetRefIndex - DatasetRef index.
      Returns:
      the DatasetRef property.
    • getProjectDescription

      String getProjectDescription(int projectIndex)
      Get the Description property of Project.
      Parameters:
      projectIndex - the Project index.
      Returns:
      the Description property.
    • getProjectExperimenterGroupRef

      String getProjectExperimenterGroupRef(int projectIndex)
      Get the ExperimenterGroupRef property of Project.
      Parameters:
      projectIndex - the Project index.
      Returns:
      the ExperimenterGroupRef property.
    • getProjectExperimenterRef

      String getProjectExperimenterRef(int projectIndex)
      Get the ExperimenterRef property of Project.
      Parameters:
      projectIndex - the Project index.
      Returns:
      the ExperimenterRef property.
    • getProjectID

      String getProjectID(int projectIndex)
      Get the ID property of Project.
      Parameters:
      projectIndex - the Project index.
      Returns:
      the ID property.
    • getProjectName

      String getProjectName(int projectIndex)
      Get the Name property of Project.
      Parameters:
      projectIndex - the Project index.
      Returns:
      the Name property.
    • getROIAnnotationRef

      String getROIAnnotationRef(int ROIIndex, int annotationRefIndex)
      Get the AnnotationRef property of ROI.
      Parameters:
      ROIIndex - the ROI index.
      annotationRefIndex - AnnotationRef index.
      Returns:
      the AnnotationRef property.
    • getROIDescription

      String getROIDescription(int ROIIndex)
      Get the Description property of ROI.
      Parameters:
      ROIIndex - the ROI index.
      Returns:
      the Description property.
    • getROIID

      String getROIID(int ROIIndex)
      Get the ID property of ROI.
      Parameters:
      ROIIndex - the ROI index.
      Returns:
      the ID property.
    • getROIName

      String getROIName(int ROIIndex)
      Get the Name property of ROI.
      Parameters:
      ROIIndex - the ROI index.
      Returns:
      the Name property.
    • getReagentAnnotationRef

      String getReagentAnnotationRef(int screenIndex, int reagentIndex, int annotationRefIndex)
      Get the AnnotationRef property of Reagent.
      Parameters:
      screenIndex - the Screen index.
      reagentIndex - the Reagent index.
      annotationRefIndex - AnnotationRef index.
      Returns:
      the AnnotationRef property.
    • getReagentDescription

      String getReagentDescription(int screenIndex, int reagentIndex)
      Get the Description property of Reagent.
      Parameters:
      screenIndex - the Screen index.
      reagentIndex - the Reagent index.
      Returns:
      the Description property.
    • getReagentID

      String getReagentID(int screenIndex, int reagentIndex)
      Get the ID property of Reagent.
      Parameters:
      screenIndex - the Screen index.
      reagentIndex - the Reagent index.
      Returns:
      the ID property.
    • getReagentName

      String getReagentName(int screenIndex, int reagentIndex)
      Get the Name property of Reagent.
      Parameters:
      screenIndex - the Screen index.
      reagentIndex - the Reagent index.
      Returns:
      the Name property.
    • getReagentReagentIdentifier

      String getReagentReagentIdentifier(int screenIndex, int reagentIndex)
      Get the ReagentIdentifier property of Reagent.
      Parameters:
      screenIndex - the Screen index.
      reagentIndex - the Reagent index.
      Returns:
      the ReagentIdentifier property.
    • getRectangleAnnotationRef

      String getRectangleAnnotationRef(int ROIIndex, int shapeIndex, int annotationRefIndex)
      Get the AnnotationRef property of Rectangle.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      annotationRefIndex - AnnotationRef index.
      Returns:
      the AnnotationRef property.
    • getRectangleFillColor

      Color getRectangleFillColor(int ROIIndex, int shapeIndex)
      Get the FillColor property of Rectangle.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the FillColor property.
    • getRectangleFillRule

      FillRule getRectangleFillRule(int ROIIndex, int shapeIndex)
      Get the FillRule property of Rectangle.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the FillRule property.
    • getRectangleFontFamily

      FontFamily getRectangleFontFamily(int ROIIndex, int shapeIndex)
      Get the FontFamily property of Rectangle.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the FontFamily property.
    • getRectangleFontSize

      Length getRectangleFontSize(int ROIIndex, int shapeIndex)
      Get the FontSize property of Rectangle.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the FontSize property.
    • getRectangleFontStyle

      FontStyle getRectangleFontStyle(int ROIIndex, int shapeIndex)
      Get the FontStyle property of Rectangle.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the FontStyle property.
    • getRectangleHeight

      Double getRectangleHeight(int ROIIndex, int shapeIndex)
      Get the Height property of Rectangle.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the Height property.
    • getRectangleID

      String getRectangleID(int ROIIndex, int shapeIndex)
      Get the ID property of Rectangle.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the ID property.
    • getRectangleLocked

      Boolean getRectangleLocked(int ROIIndex, int shapeIndex)
      Get the Locked property of Rectangle.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the Locked property.
    • getRectangleStrokeColor

      Color getRectangleStrokeColor(int ROIIndex, int shapeIndex)
      Get the StrokeColor property of Rectangle.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the StrokeColor property.
    • getRectangleStrokeDashArray

      String getRectangleStrokeDashArray(int ROIIndex, int shapeIndex)
      Get the StrokeDashArray property of Rectangle.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the StrokeDashArray property.
    • getRectangleStrokeWidth

      Length getRectangleStrokeWidth(int ROIIndex, int shapeIndex)
      Get the StrokeWidth property of Rectangle.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the StrokeWidth property.
    • getRectangleText

      String getRectangleText(int ROIIndex, int shapeIndex)
      Get the Text property of Rectangle.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the Text property.
    • getRectangleTheC

      NonNegativeInteger getRectangleTheC(int ROIIndex, int shapeIndex)
      Get the TheC property of Rectangle.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the TheC property.
    • getRectangleTheT

      NonNegativeInteger getRectangleTheT(int ROIIndex, int shapeIndex)
      Get the TheT property of Rectangle.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the TheT property.
    • getRectangleTheZ

      NonNegativeInteger getRectangleTheZ(int ROIIndex, int shapeIndex)
      Get the TheZ property of Rectangle.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the TheZ property.
    • getRectangleTransform

      AffineTransform getRectangleTransform(int ROIIndex, int shapeIndex)
      Get the Transform property of Rectangle.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the Transform property.
    • getRectangleWidth

      Double getRectangleWidth(int ROIIndex, int shapeIndex)
      Get the Width property of Rectangle.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the Width property.
    • getRectangleX

      Double getRectangleX(int ROIIndex, int shapeIndex)
      Get the X property of Rectangle.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the X property.
    • getRectangleY

      Double getRectangleY(int ROIIndex, int shapeIndex)
      Get the Y property of Rectangle.
      Parameters:
      ROIIndex - the ROI index.
      shapeIndex - the Shape index.
      Returns:
      the Y property.
    • getRightsRightsHeld

      String getRightsRightsHeld()
      Get the RightsHeld property of Rights.
      Returns:
      the RightsHeld property.
    • getRightsRightsHolder

      String getRightsRightsHolder()
      Get the RightsHolder property of Rights.
      Returns:
      the RightsHolder property.
    • getScreenAnnotationRef

      String getScreenAnnotationRef(int screenIndex, int annotationRefIndex)
      Get the AnnotationRef property of Screen.
      Parameters:
      screenIndex - the Screen index.
      annotationRefIndex - AnnotationRef index.
      Returns:
      the AnnotationRef property.
    • getScreenDescription

      String getScreenDescription(int screenIndex)
      Get the Description property of Screen.
      Parameters:
      screenIndex - the Screen index.
      Returns:
      the Description property.
    • getScreenID

      String getScreenID(int screenIndex)
      Get the ID property of Screen.
      Parameters:
      screenIndex - the Screen index.
      Returns:
      the ID property.
    • getScreenName

      String getScreenName(int screenIndex)
      Get the Name property of Screen.
      Parameters:
      screenIndex - the Screen index.
      Returns:
      the Name property.
    • getScreenPlateRef

      String getScreenPlateRef(int screenIndex, int plateRefIndex)
      Get the PlateRef property of Screen.
      Parameters:
      screenIndex - the Screen index.
      plateRefIndex - PlateRef index.
      Returns:
      the PlateRef property.
    • getScreenProtocolDescription

      String getScreenProtocolDescription(int screenIndex)
      Get the ProtocolDescription property of Screen.
      Parameters:
      screenIndex - the Screen index.
      Returns:
      the ProtocolDescription property.
    • getScreenProtocolIdentifier

      String getScreenProtocolIdentifier(int screenIndex)
      Get the ProtocolIdentifier property of Screen.
      Parameters:
      screenIndex - the Screen index.
      Returns:
      the ProtocolIdentifier property.
    • getScreenReagentSetDescription

      String getScreenReagentSetDescription(int screenIndex)
      Get the ReagentSetDescription property of Screen.
      Parameters:
      screenIndex - the Screen index.
      Returns:
      the ReagentSetDescription property.
    • getScreenReagentSetIdentifier

      String getScreenReagentSetIdentifier(int screenIndex)
      Get the ReagentSetIdentifier property of Screen.
      Parameters:
      screenIndex - the Screen index.
      Returns:
      the ReagentSetIdentifier property.
    • getScreenType

      String getScreenType(int screenIndex)
      Get the Type property of Screen.
      Parameters:
      screenIndex - the Screen index.
      Returns:
      the Type property.
    • getStageLabelName

      String getStageLabelName(int imageIndex)
      Get the Name property of StageLabel.
      Parameters:
      imageIndex - the Image index.
      Returns:
      the Name property.
    • getStageLabelX

      Length getStageLabelX(int imageIndex)
      Get the X property of StageLabel.
      Parameters:
      imageIndex - the Image index.
      Returns:
      the X property.
    • getStageLabelY

      Length getStageLabelY(int imageIndex)
      Get the Y property of StageLabel.
      Parameters:
      imageIndex - the Image index.
      Returns:
      the Y property.
    • getStageLabelZ

      Length getStageLabelZ(int imageIndex)
      Get the Z property of StageLabel.
      Parameters:
      imageIndex - the Image index.
      Returns:
      the Z property.
    • getTagAnnotationAnnotationRef

      String getTagAnnotationAnnotationRef(int tagAnnotationIndex, int annotationRefIndex)
      Get the AnnotationRef property of TagAnnotation.
      Parameters:
      tagAnnotationIndex - the TagAnnotation index.
      annotationRefIndex - AnnotationRef index.
      Returns:
      the AnnotationRef property.
    • getTagAnnotationAnnotator

      String getTagAnnotationAnnotator(int tagAnnotationIndex)
      Get the Annotator property of TagAnnotation.
      Parameters:
      tagAnnotationIndex - the TagAnnotation index.
      Returns:
      the Annotator property.
    • getTagAnnotationDescription

      String getTagAnnotationDescription(int tagAnnotationIndex)
      Get the Description property of TagAnnotation.
      Parameters:
      tagAnnotationIndex - the TagAnnotation index.
      Returns:
      the Description property.
    • getTagAnnotationID

      String getTagAnnotationID(int tagAnnotationIndex)
      Get the ID property of TagAnnotation.
      Parameters:
      tagAnnotationIndex - the TagAnnotation index.
      Returns:
      the ID property.
    • getTagAnnotationNamespace

      String getTagAnnotationNamespace(int tagAnnotationIndex)
      Get the Namespace property of TagAnnotation.
      Parameters:
      tagAnnotationIndex - the TagAnnotation index.
      Returns:
      the Namespace property.
    • getTagAnnotationValue

      String getTagAnnotationValue(int tagAnnotationIndex)
      Get the Value property of TagAnnotation.
      Parameters:
      tagAnnotationIndex - the TagAnnotation index.
      Returns:
      the Value property.
    • getTermAnnotationAnnotationRef

      String getTermAnnotationAnnotationRef(int termAnnotationIndex, int annotationRefIndex)
      Get the AnnotationRef property of TermAnnotation.
      Parameters:
      termAnnotationIndex - the TermAnnotation index.
      annotationRefIndex - AnnotationRef index.
      Returns:
      the AnnotationRef property.
    • getTermAnnotationAnnotator

      String getTermAnnotationAnnotator(int termAnnotationIndex)
      Get the Annotator property of TermAnnotation.
      Parameters:
      termAnnotationIndex - the TermAnnotation index.
      Returns:
      the Annotator property.
    • getTermAnnotationDescription

      String getTermAnnotationDescription(int termAnnotationIndex)
      Get the Description property of TermAnnotation.
      Parameters:
      termAnnotationIndex - the TermAnnotation index.
      Returns:
      the Description property.
    • getTermAnnotationID

      String getTermAnnotationID(int termAnnotationIndex)
      Get the ID property of TermAnnotation.
      Parameters:
      termAnnotationIndex - the TermAnnotation index.
      Returns:
      the ID property.
    • getTermAnnotationNamespace

      String getTermAnnotationNamespace(int termAnnotationIndex)
      Get the Namespace property of TermAnnotation.
      Parameters:
      termAnnotationIndex - the TermAnnotation index.
      Returns:
      the Namespace property.
    • getTermAnnotationValue

      String getTermAnnotationValue(int termAnnotationIndex)
      Get the Value property of TermAnnotation.
      Parameters:
      termAnnotationIndex - the TermAnnotation index.
      Returns:
      the Value property.
    • getTiffDataFirstC

      NonNegativeInteger getTiffDataFirstC(int imageIndex, int tiffDataIndex)
      Get the FirstC property of TiffData.
      Parameters:
      imageIndex - the Image index.
      tiffDataIndex - the TiffData index.
      Returns:
      the FirstC property.
    • getTiffDataFirstT

      NonNegativeInteger getTiffDataFirstT(int imageIndex, int tiffDataIndex)
      Get the FirstT property of TiffData.
      Parameters:
      imageIndex - the Image index.
      tiffDataIndex - the TiffData index.
      Returns:
      the FirstT property.
    • getTiffDataFirstZ

      NonNegativeInteger getTiffDataFirstZ(int imageIndex, int tiffDataIndex)
      Get the FirstZ property of TiffData.
      Parameters:
      imageIndex - the Image index.
      tiffDataIndex - the TiffData index.
      Returns:
      the FirstZ property.
    • getTiffDataIFD

      NonNegativeInteger getTiffDataIFD(int imageIndex, int tiffDataIndex)
      Get the IFD property of TiffData.
      Parameters:
      imageIndex - the Image index.
      tiffDataIndex - the TiffData index.
      Returns:
      the IFD property.
    • getTiffDataPlaneCount

      NonNegativeInteger getTiffDataPlaneCount(int imageIndex, int tiffDataIndex)
      Get the PlaneCount property of TiffData.
      Parameters:
      imageIndex - the Image index.
      tiffDataIndex - the TiffData index.
      Returns:
      the PlaneCount property.
    • getTimestampAnnotationAnnotationRef

      String getTimestampAnnotationAnnotationRef(int timestampAnnotationIndex, int annotationRefIndex)
      Get the AnnotationRef property of TimestampAnnotation.
      Parameters:
      timestampAnnotationIndex - the TimestampAnnotation index.
      annotationRefIndex - AnnotationRef index.
      Returns:
      the AnnotationRef property.
    • getTimestampAnnotationAnnotator

      String getTimestampAnnotationAnnotator(int timestampAnnotationIndex)
      Get the Annotator property of TimestampAnnotation.
      Parameters:
      timestampAnnotationIndex - the TimestampAnnotation index.
      Returns:
      the Annotator property.
    • getTimestampAnnotationDescription

      String getTimestampAnnotationDescription(int timestampAnnotationIndex)
      Get the Description property of TimestampAnnotation.
      Parameters:
      timestampAnnotationIndex - the TimestampAnnotation index.
      Returns:
      the Description property.
    • getTimestampAnnotationID

      String getTimestampAnnotationID(int timestampAnnotationIndex)
      Get the ID property of TimestampAnnotation.
      Parameters:
      timestampAnnotationIndex - the TimestampAnnotation index.
      Returns:
      the ID property.
    • getTimestampAnnotationNamespace

      String getTimestampAnnotationNamespace(int timestampAnnotationIndex)
      Get the Namespace property of TimestampAnnotation.
      Parameters:
      timestampAnnotationIndex - the TimestampAnnotation index.
      Returns:
      the Namespace property.
    • getTimestampAnnotationValue

      Timestamp getTimestampAnnotationValue(int timestampAnnotationIndex)
      Get the Value property of TimestampAnnotation.
      Parameters:
      timestampAnnotationIndex - the TimestampAnnotation index.
      Returns:
      the Value property.
    • getTransmittanceRangeCutIn

      Length getTransmittanceRangeCutIn(int instrumentIndex, int filterIndex)
      Get the CutIn property of TransmittanceRange.
      Parameters:
      instrumentIndex - the Instrument index.
      filterIndex - the Filter index.
      Returns:
      the CutIn property.
    • getTransmittanceRangeCutInTolerance

      Length getTransmittanceRangeCutInTolerance(int instrumentIndex, int filterIndex)
      Get the CutInTolerance property of TransmittanceRange.
      Parameters:
      instrumentIndex - the Instrument index.
      filterIndex - the Filter index.
      Returns:
      the CutInTolerance property.
    • getTransmittanceRangeCutOut

      Length getTransmittanceRangeCutOut(int instrumentIndex, int filterIndex)
      Get the CutOut property of TransmittanceRange.
      Parameters:
      instrumentIndex - the Instrument index.
      filterIndex - the Filter index.
      Returns:
      the CutOut property.
    • getTransmittanceRangeCutOutTolerance

      Length getTransmittanceRangeCutOutTolerance(int instrumentIndex, int filterIndex)
      Get the CutOutTolerance property of TransmittanceRange.
      Parameters:
      instrumentIndex - the Instrument index.
      filterIndex - the Filter index.
      Returns:
      the CutOutTolerance property.
    • getTransmittanceRangeTransmittance

      PercentFraction getTransmittanceRangeTransmittance(int instrumentIndex, int filterIndex)
      Get the Transmittance property of TransmittanceRange.
      Parameters:
      instrumentIndex - the Instrument index.
      filterIndex - the Filter index.
      Returns:
      the Transmittance property.
    • getUUIDFileName

      String getUUIDFileName(int imageIndex, int tiffDataIndex)
      Get the FileName property of UUID.
      Parameters:
      imageIndex - the Image index.
      tiffDataIndex - the TiffData index.
      Returns:
      the FileName property.
    • getWellAnnotationRef

      String getWellAnnotationRef(int plateIndex, int wellIndex, int annotationRefIndex)
      Get the AnnotationRef property of Well.
      Parameters:
      plateIndex - the Plate index.
      wellIndex - the Well index.
      annotationRefIndex - AnnotationRef index.
      Returns:
      the AnnotationRef property.
    • getWellColor

      Color getWellColor(int plateIndex, int wellIndex)
      Get the Color property of Well.
      Parameters:
      plateIndex - the Plate index.
      wellIndex - the Well index.
      Returns:
      the Color property.
    • getWellColumn

      NonNegativeInteger getWellColumn(int plateIndex, int wellIndex)
      Get the Column property of Well.
      Parameters:
      plateIndex - the Plate index.
      wellIndex - the Well index.
      Returns:
      the Column property.
    • getWellExternalDescription

      String getWellExternalDescription(int plateIndex, int wellIndex)
      Get the ExternalDescription property of Well.
      Parameters:
      plateIndex - the Plate index.
      wellIndex - the Well index.
      Returns:
      the ExternalDescription property.
    • getWellExternalIdentifier

      String getWellExternalIdentifier(int plateIndex, int wellIndex)
      Get the ExternalIdentifier property of Well.
      Parameters:
      plateIndex - the Plate index.
      wellIndex - the Well index.
      Returns:
      the ExternalIdentifier property.
    • getWellID

      String getWellID(int plateIndex, int wellIndex)
      Get the ID property of Well.
      Parameters:
      plateIndex - the Plate index.
      wellIndex - the Well index.
      Returns:
      the ID property.
    • getWellReagentRef

      String getWellReagentRef(int plateIndex, int wellIndex)
      Get the ReagentRef property of Well.
      Parameters:
      plateIndex - the Plate index.
      wellIndex - the Well index.
      Returns:
      the ReagentRef property.
    • getWellRow

      NonNegativeInteger getWellRow(int plateIndex, int wellIndex)
      Get the Row property of Well.
      Parameters:
      plateIndex - the Plate index.
      wellIndex - the Well index.
      Returns:
      the Row property.
    • getWellType

      String getWellType(int plateIndex, int wellIndex)
      Get the Type property of Well.
      Parameters:
      plateIndex - the Plate index.
      wellIndex - the Well index.
      Returns:
      the Type property.
    • getWellSampleID

      String getWellSampleID(int plateIndex, int wellIndex, int wellSampleIndex)
      Get the ID property of WellSample.
      Parameters:
      plateIndex - the Plate index.
      wellIndex - the Well index.
      wellSampleIndex - the WellSample index.
      Returns:
      the ID property.
    • getWellSampleImageRef

      String getWellSampleImageRef(int plateIndex, int wellIndex, int wellSampleIndex)
      Get the ImageRef property of WellSample.
      Parameters:
      plateIndex - the Plate index.
      wellIndex - the Well index.
      wellSampleIndex - the WellSample index.
      Returns:
      the ImageRef property.
    • getWellSampleIndex

      NonNegativeInteger getWellSampleIndex(int plateIndex, int wellIndex, int wellSampleIndex)
      Get the Index property of WellSample.
      Parameters:
      plateIndex - the Plate index.
      wellIndex - the Well index.
      wellSampleIndex - the WellSample index.
      Returns:
      the Index property.
    • getWellSamplePositionX

      Length getWellSamplePositionX(int plateIndex, int wellIndex, int wellSampleIndex)
      Get the PositionX property of WellSample.
      Parameters:
      plateIndex - the Plate index.
      wellIndex - the Well index.
      wellSampleIndex - the WellSample index.
      Returns:
      the PositionX property.
    • getWellSamplePositionY

      Length getWellSamplePositionY(int plateIndex, int wellIndex, int wellSampleIndex)
      Get the PositionY property of WellSample.
      Parameters:
      plateIndex - the Plate index.
      wellIndex - the Well index.
      wellSampleIndex - the WellSample index.
      Returns:
      the PositionY property.
    • getWellSampleTimepoint

      Timestamp getWellSampleTimepoint(int plateIndex, int wellIndex, int wellSampleIndex)
      Get the Timepoint property of WellSample.
      Parameters:
      plateIndex - the Plate index.
      wellIndex - the Well index.
      wellSampleIndex - the WellSample index.
      Returns:
      the Timepoint property.
    • getXMLAnnotationAnnotationRef

      String getXMLAnnotationAnnotationRef(int XMLAnnotationIndex, int annotationRefIndex)
      Get the AnnotationRef property of XMLAnnotation.
      Parameters:
      XMLAnnotationIndex - the XMLAnnotation index.
      annotationRefIndex - AnnotationRef index.
      Returns:
      the AnnotationRef property.
    • getXMLAnnotationAnnotator

      String getXMLAnnotationAnnotator(int XMLAnnotationIndex)
      Get the Annotator property of XMLAnnotation.
      Parameters:
      XMLAnnotationIndex - the XMLAnnotation index.
      Returns:
      the Annotator property.
    • getXMLAnnotationDescription

      String getXMLAnnotationDescription(int XMLAnnotationIndex)
      Get the Description property of XMLAnnotation.
      Parameters:
      XMLAnnotationIndex - the XMLAnnotation index.
      Returns:
      the Description property.
    • getXMLAnnotationID

      String getXMLAnnotationID(int XMLAnnotationIndex)
      Get the ID property of XMLAnnotation.
      Parameters:
      XMLAnnotationIndex - the XMLAnnotation index.
      Returns:
      the ID property.
    • getXMLAnnotationNamespace

      String getXMLAnnotationNamespace(int XMLAnnotationIndex)
      Get the Namespace property of XMLAnnotation.
      Parameters:
      XMLAnnotationIndex - the XMLAnnotation index.
      Returns:
      the Namespace property.
    • getXMLAnnotationValue

      String getXMLAnnotationValue(int XMLAnnotationIndex)
      Get the Value property of XMLAnnotation.
      Parameters:
      XMLAnnotationIndex - the XMLAnnotation index.
      Returns:
      the Value property.