Interface MetadataStore
- All Superinterfaces:
BaseMetadata
- All Known Subinterfaces:
IMetadata,OMEXMLMetadata
- All Known Implementing Classes:
AbstractOMEXMLMetadata,AggregateMetadata,DummyMetadata,FilterMetadata,OMEXMLMetadataImpl
The MetadataStore interface encompasses the metadata that
any specific storage medium (file, relational database, etc.) should be
expected to store into its backing data model.
The MetadataStore interface goes hand in hand with the
MetadataRetrieve interface. Essentially,
MetadataRetrieve provides the "getter" methods for a storage
medium, and MetadataStore provides the "setter" methods.
Since it often makes sense for a storage medium to implement both
interfaces, there is also an IMetadata interface encompassing
both MetadataStore and MetadataRetrieve, which
reduces the need to cast between object types.
See OMEXMLMetadata for an example
implementation.
Important note: It is strongly recommended that applications
(e.g., file format readers) using MetadataStore populate
information in a linear order. Specifically, iterating over entities
from "leftmost" index to "rightmost" index is required for certain
MetadataStore implementations such as OMERO's
OMEROMetadataStore. For example, when populating Image, Pixels
and Plane information, an outer loop should iterate across
imageIndex, an inner loop should iterate across
pixelsIndex, and an innermost loop should handle
planeIndex. For an illustration of the ideal traversal order,
see MetadataConverter.convertMetadata(ome.xml.meta.MetadataRetrieve, ome.xml.meta.MetadataStore).
- Author:
- Chris Allan callan at blackcat.ca, Curtis Rueden ctrueden at wisc.edu
-
Method Summary
Modifier and TypeMethodDescriptionvoidCreate root node.getRoot()Get the root node of the metadata.voidsetArcAnnotationRef(String annotation, int instrumentIndex, int lightSourceIndex, int annotationRefIndex) Set the AnnotationRef property of Arc.voidSet the ID property of Arc.voidsetArcLotNumber(String lotNumber, int instrumentIndex, int lightSourceIndex) Set the LotNumber property of Arc.voidsetArcManufacturer(String manufacturer, int instrumentIndex, int lightSourceIndex) Set the Manufacturer property of Arc.voidsetArcModel(String model, int instrumentIndex, int lightSourceIndex) Set the Model property of Arc.voidsetArcPower(Power power, int instrumentIndex, int lightSourceIndex) Set the Power property of Arc.voidsetArcSerialNumber(String serialNumber, int instrumentIndex, int lightSourceIndex) Set the SerialNumber property of Arc.voidsetArcType(ArcType type, int instrumentIndex, int lightSourceIndex) Set the Type property of Arc.voidsetBinaryFileBinData(byte[] base64Binary, int fileAnnotationIndex) Set the Base64Binary property of BinData.voidsetBinaryFileBinDataBigEndian(Boolean bigEndian, int fileAnnotationIndex) Set the BigEndian property of BinData.voidsetBinaryFileBinDataCompression(Compression compression, int fileAnnotationIndex) Set the Compression property of BinData.voidsetBinaryFileBinDataLength(NonNegativeLong length, int fileAnnotationIndex) Set the Length property of BinData.voidsetBinaryFileFileName(String fileName, int fileAnnotationIndex) Set the FileName property of BinaryFile.voidsetBinaryFileMIMEType(String mimeType, int fileAnnotationIndex) Set the MIMEType property of BinaryFile.voidsetBinaryFileSize(NonNegativeLong size, int fileAnnotationIndex) Set the Size property of BinaryFile.voidsetBinaryOnlyMetadataFile(String metadataFile) Set the MetadataFile property of BinaryOnly.voidsetBinaryOnlyUUID(String uuid) Set the UUID property of BinaryOnly.voidsetBooleanAnnotationAnnotationRef(String annotation, int booleanAnnotationIndex, int annotationRefIndex) Set the AnnotationRef property of BooleanAnnotation.voidsetBooleanAnnotationAnnotator(String annotator, int booleanAnnotationIndex) Set the Annotator property of BooleanAnnotation.voidsetBooleanAnnotationDescription(String description, int booleanAnnotationIndex) Set the Description property of BooleanAnnotation.voidsetBooleanAnnotationID(String id, int booleanAnnotationIndex) Set the ID property of BooleanAnnotation.voidsetBooleanAnnotationNamespace(String namespace, int booleanAnnotationIndex) Set the Namespace property of BooleanAnnotation.voidsetBooleanAnnotationValue(Boolean value, int booleanAnnotationIndex) Set the Value property of BooleanAnnotation.voidsetChannelAcquisitionMode(AcquisitionMode acquisitionMode, int imageIndex, int channelIndex) Set the AcquisitionMode property of Channel.voidsetChannelAnnotationRef(String annotation, int imageIndex, int channelIndex, int annotationRefIndex) Set the AnnotationRef property of Channel.voidsetChannelColor(Color color, int imageIndex, int channelIndex) Set the Color property of Channel.voidsetChannelContrastMethod(ContrastMethod contrastMethod, int imageIndex, int channelIndex) Set the ContrastMethod property of Channel.voidsetChannelEmissionWavelength(Length emissionWavelength, int imageIndex, int channelIndex) Set the EmissionWavelength property of Channel.voidsetChannelExcitationWavelength(Length excitationWavelength, int imageIndex, int channelIndex) Set the ExcitationWavelength property of Channel.voidsetChannelFilterSetRef(String filterSet, int imageIndex, int channelIndex) Set the FilterSetRef property of Channel.voidsetChannelFluor(String fluor, int imageIndex, int channelIndex) Set the Fluor property of Channel.voidsetChannelID(String id, int imageIndex, int channelIndex) Set the ID property of Channel.voidsetChannelIlluminationType(IlluminationType illuminationType, int imageIndex, int channelIndex) Set the IlluminationType property of Channel.voidsetChannelLightSourceSettingsAttenuation(PercentFraction attenuation, int imageIndex, int channelIndex) Set the Attenuation property of LightSourceSettings.voidsetChannelLightSourceSettingsID(String id, int imageIndex, int channelIndex) Set the ID property of LightSourceSettings.voidsetChannelLightSourceSettingsWavelength(Length wavelength, int imageIndex, int channelIndex) Set the Wavelength property of LightSourceSettings.voidsetChannelName(String name, int imageIndex, int channelIndex) Set the Name property of Channel.voidsetChannelNDFilter(Double ndFilter, int imageIndex, int channelIndex) Set the NDFilter property of Channel.voidsetChannelPinholeSize(Length pinholeSize, int imageIndex, int channelIndex) Set the PinholeSize property of Channel.voidsetChannelPockelCellSetting(Integer pockelCellSetting, int imageIndex, int channelIndex) Set the PockelCellSetting property of Channel.voidsetChannelSamplesPerPixel(PositiveInteger samplesPerPixel, int imageIndex, int channelIndex) Set the SamplesPerPixel property of Channel.voidsetCommentAnnotationAnnotationRef(String annotation, int commentAnnotationIndex, int annotationRefIndex) Set the AnnotationRef property of CommentAnnotation.voidsetCommentAnnotationAnnotator(String annotator, int commentAnnotationIndex) Set the Annotator property of CommentAnnotation.voidsetCommentAnnotationDescription(String description, int commentAnnotationIndex) Set the Description property of CommentAnnotation.voidsetCommentAnnotationID(String id, int commentAnnotationIndex) Set the ID property of CommentAnnotation.voidsetCommentAnnotationNamespace(String namespace, int commentAnnotationIndex) Set the Namespace property of CommentAnnotation.voidsetCommentAnnotationValue(String value, int commentAnnotationIndex) Set the Value property of CommentAnnotation.default voidsetCreator(String creator) Set the Creator associated with this collection of metadata.voidsetDatasetAnnotationRef(String annotation, int datasetIndex, int annotationRefIndex) Set the AnnotationRef property of Dataset.voidsetDatasetDescription(String description, int datasetIndex) Set the Description property of Dataset.voidsetDatasetExperimenterGroupRef(String experimenterGroup, int datasetIndex) Set the ExperimenterGroupRef property of Dataset.voidsetDatasetExperimenterRef(String experimenter, int datasetIndex) Set the ExperimenterRef property of Dataset.voidsetDatasetID(String id, int datasetIndex) Set the ID property of Dataset.voidsetDatasetImageRef(String image, int datasetIndex, int imageRefIndex) Set the ImageRef property of Dataset.voidsetDatasetName(String name, int datasetIndex) Set the Name property of Dataset.voidsetDetectorAmplificationGain(Double amplificationGain, int instrumentIndex, int detectorIndex) Set the AmplificationGain property of Detector.voidsetDetectorAnnotationRef(String annotation, int instrumentIndex, int detectorIndex, int annotationRefIndex) Set the AnnotationRef property of Detector.voidsetDetectorGain(Double gain, int instrumentIndex, int detectorIndex) Set the Gain property of Detector.voidsetDetectorID(String id, int instrumentIndex, int detectorIndex) Set the ID property of Detector.voidsetDetectorLotNumber(String lotNumber, int instrumentIndex, int detectorIndex) Set the LotNumber property of Detector.voidsetDetectorManufacturer(String manufacturer, int instrumentIndex, int detectorIndex) Set the Manufacturer property of Detector.voidsetDetectorModel(String model, int instrumentIndex, int detectorIndex) Set the Model property of Detector.voidsetDetectorOffset(Double offset, int instrumentIndex, int detectorIndex) Set the Offset property of Detector.voidsetDetectorSerialNumber(String serialNumber, int instrumentIndex, int detectorIndex) Set the SerialNumber property of Detector.voidsetDetectorSettingsBinning(Binning binning, int imageIndex, int channelIndex) Set the Binning property of DetectorSettings.voidsetDetectorSettingsGain(Double gain, int imageIndex, int channelIndex) Set the Gain property of DetectorSettings.voidsetDetectorSettingsID(String id, int imageIndex, int channelIndex) Set the ID property of DetectorSettings.voidsetDetectorSettingsIntegration(PositiveInteger integration, int imageIndex, int channelIndex) Set the Integration property of DetectorSettings.voidsetDetectorSettingsOffset(Double offset, int imageIndex, int channelIndex) Set the Offset property of DetectorSettings.voidsetDetectorSettingsReadOutRate(Frequency readOutRate, int imageIndex, int channelIndex) Set the ReadOutRate property of DetectorSettings.voidsetDetectorSettingsVoltage(ElectricPotential voltage, int imageIndex, int channelIndex) Set the Voltage property of DetectorSettings.voidsetDetectorSettingsZoom(Double zoom, int imageIndex, int channelIndex) Set the Zoom property of DetectorSettings.voidsetDetectorType(DetectorType type, int instrumentIndex, int detectorIndex) Set the Type property of Detector.voidsetDetectorVoltage(ElectricPotential voltage, int instrumentIndex, int detectorIndex) Set the Voltage property of Detector.voidsetDetectorZoom(Double zoom, int instrumentIndex, int detectorIndex) Set the Zoom property of Detector.voidsetDichroicAnnotationRef(String annotation, int instrumentIndex, int dichroicIndex, int annotationRefIndex) Set the AnnotationRef property of Dichroic.voidsetDichroicID(String id, int instrumentIndex, int dichroicIndex) Set the ID property of Dichroic.voidsetDichroicLotNumber(String lotNumber, int instrumentIndex, int dichroicIndex) Set the LotNumber property of Dichroic.voidsetDichroicManufacturer(String manufacturer, int instrumentIndex, int dichroicIndex) Set the Manufacturer property of Dichroic.voidsetDichroicModel(String model, int instrumentIndex, int dichroicIndex) Set the Model property of Dichroic.voidsetDichroicSerialNumber(String serialNumber, int instrumentIndex, int dichroicIndex) Set the SerialNumber property of Dichroic.voidsetDoubleAnnotationAnnotationRef(String annotation, int doubleAnnotationIndex, int annotationRefIndex) Set the AnnotationRef property of DoubleAnnotation.voidsetDoubleAnnotationAnnotator(String annotator, int doubleAnnotationIndex) Set the Annotator property of DoubleAnnotation.voidsetDoubleAnnotationDescription(String description, int doubleAnnotationIndex) Set the Description property of DoubleAnnotation.voidsetDoubleAnnotationID(String id, int doubleAnnotationIndex) Set the ID property of DoubleAnnotation.voidsetDoubleAnnotationNamespace(String namespace, int doubleAnnotationIndex) Set the Namespace property of DoubleAnnotation.voidsetDoubleAnnotationValue(Double value, int doubleAnnotationIndex) Set the Value property of DoubleAnnotation.voidsetEllipseAnnotationRef(String annotation, int ROIIndex, int shapeIndex, int annotationRefIndex) Set the AnnotationRef property of Ellipse.voidsetEllipseFillColor(Color fillColor, int ROIIndex, int shapeIndex) Set the FillColor property of Ellipse.voidsetEllipseFillRule(FillRule fillRule, int ROIIndex, int shapeIndex) Set the FillRule property of Ellipse.voidsetEllipseFontFamily(FontFamily fontFamily, int ROIIndex, int shapeIndex) Set the FontFamily property of Ellipse.voidsetEllipseFontSize(Length fontSize, int ROIIndex, int shapeIndex) Set the FontSize property of Ellipse.voidsetEllipseFontStyle(FontStyle fontStyle, int ROIIndex, int shapeIndex) Set the FontStyle property of Ellipse.voidsetEllipseID(String id, int ROIIndex, int shapeIndex) Set the ID property of Ellipse.voidsetEllipseLocked(Boolean locked, int ROIIndex, int shapeIndex) Set the Locked property of Ellipse.voidsetEllipseRadiusX(Double radiusX, int ROIIndex, int shapeIndex) Set the RadiusX property of Ellipse.voidsetEllipseRadiusY(Double radiusY, int ROIIndex, int shapeIndex) Set the RadiusY property of Ellipse.voidsetEllipseStrokeColor(Color strokeColor, int ROIIndex, int shapeIndex) Set the StrokeColor property of Ellipse.voidsetEllipseStrokeDashArray(String strokeDashArray, int ROIIndex, int shapeIndex) Set the StrokeDashArray property of Ellipse.voidsetEllipseStrokeWidth(Length strokeWidth, int ROIIndex, int shapeIndex) Set the StrokeWidth property of Ellipse.voidsetEllipseText(String text, int ROIIndex, int shapeIndex) Set the Text property of Ellipse.voidsetEllipseTheC(NonNegativeInteger theC, int ROIIndex, int shapeIndex) Set the TheC property of Ellipse.voidsetEllipseTheT(NonNegativeInteger theT, int ROIIndex, int shapeIndex) Set the TheT property of Ellipse.voidsetEllipseTheZ(NonNegativeInteger theZ, int ROIIndex, int shapeIndex) Set the TheZ property of Ellipse.voidsetEllipseTransform(AffineTransform transform, int ROIIndex, int shapeIndex) Set the Transform property of Ellipse.voidsetEllipseX(Double x, int ROIIndex, int shapeIndex) Set the X property of Ellipse.voidsetEllipseY(Double y, int ROIIndex, int shapeIndex) Set the Y property of Ellipse.voidsetExperimentDescription(String description, int experimentIndex) Set the Description property of Experiment.voidsetExperimenterAnnotationRef(String annotation, int experimenterIndex, int annotationRefIndex) Set the AnnotationRef property of Experimenter.voidsetExperimenterEmail(String email, int experimenterIndex) Set the Email property of Experimenter.voidsetExperimenterFirstName(String firstName, int experimenterIndex) Set the FirstName property of Experimenter.voidsetExperimenterGroupAnnotationRef(String annotation, int experimenterGroupIndex, int annotationRefIndex) Set the AnnotationRef property of ExperimenterGroup.voidsetExperimenterGroupDescription(String description, int experimenterGroupIndex) Set the Description property of ExperimenterGroup.voidsetExperimenterGroupExperimenterRef(String experimenter, int experimenterGroupIndex, int experimenterRefIndex) Set the ExperimenterRef property of ExperimenterGroup.voidsetExperimenterGroupID(String id, int experimenterGroupIndex) Set the ID property of ExperimenterGroup.voidsetExperimenterGroupLeader(String leader, int experimenterGroupIndex, int leaderIndex) Set the Leader property of ExperimenterGroup.voidsetExperimenterGroupName(String name, int experimenterGroupIndex) Set the Name property of ExperimenterGroup.voidsetExperimenterID(String id, int experimenterIndex) Set the ID property of Experimenter.voidsetExperimenterInstitution(String institution, int experimenterIndex) Set the Institution property of Experimenter.voidsetExperimenterLastName(String lastName, int experimenterIndex) Set the LastName property of Experimenter.voidsetExperimenterMiddleName(String middleName, int experimenterIndex) Set the MiddleName property of Experimenter.voidsetExperimenterUserName(String userName, int experimenterIndex) Set the UserName property of Experimenter.voidsetExperimentExperimenterRef(String experimenter, int experimentIndex) Set the ExperimenterRef property of Experiment.voidsetExperimentID(String id, int experimentIndex) Set the ID property of Experiment.voidsetExperimentType(ExperimentType type, int experimentIndex) Set the Type property of Experiment.voidsetFilamentAnnotationRef(String annotation, int instrumentIndex, int lightSourceIndex, int annotationRefIndex) Set the AnnotationRef property of Filament.voidsetFilamentID(String id, int instrumentIndex, int lightSourceIndex) Set the ID property of Filament.voidsetFilamentLotNumber(String lotNumber, int instrumentIndex, int lightSourceIndex) Set the LotNumber property of Filament.voidsetFilamentManufacturer(String manufacturer, int instrumentIndex, int lightSourceIndex) Set the Manufacturer property of Filament.voidsetFilamentModel(String model, int instrumentIndex, int lightSourceIndex) Set the Model property of Filament.voidsetFilamentPower(Power power, int instrumentIndex, int lightSourceIndex) Set the Power property of Filament.voidsetFilamentSerialNumber(String serialNumber, int instrumentIndex, int lightSourceIndex) Set the SerialNumber property of Filament.voidsetFilamentType(FilamentType type, int instrumentIndex, int lightSourceIndex) Set the Type property of Filament.voidsetFileAnnotationAnnotationRef(String annotation, int fileAnnotationIndex, int annotationRefIndex) Set the AnnotationRef property of FileAnnotation.voidsetFileAnnotationAnnotator(String annotator, int fileAnnotationIndex) Set the Annotator property of FileAnnotation.voidsetFileAnnotationDescription(String description, int fileAnnotationIndex) Set the Description property of FileAnnotation.voidsetFileAnnotationID(String id, int fileAnnotationIndex) Set the ID property of FileAnnotation.voidsetFileAnnotationNamespace(String namespace, int fileAnnotationIndex) Set the Namespace property of FileAnnotation.voidsetFilterAnnotationRef(String annotation, int instrumentIndex, int filterIndex, int annotationRefIndex) Set the AnnotationRef property of Filter.voidsetFilterFilterWheel(String filterWheel, int instrumentIndex, int filterIndex) Set the FilterWheel property of Filter.voidsetFilterID(String id, int instrumentIndex, int filterIndex) Set the ID property of Filter.voidsetFilterLotNumber(String lotNumber, int instrumentIndex, int filterIndex) Set the LotNumber property of Filter.voidsetFilterManufacturer(String manufacturer, int instrumentIndex, int filterIndex) Set the Manufacturer property of Filter.voidsetFilterModel(String model, int instrumentIndex, int filterIndex) Set the Model property of Filter.voidsetFilterSerialNumber(String serialNumber, int instrumentIndex, int filterIndex) Set the SerialNumber property of Filter.voidsetFilterSetDichroicRef(String dichroic, int instrumentIndex, int filterSetIndex) Set the DichroicRef property of FilterSet.voidsetFilterSetEmissionFilterRef(String emissionFilter, int instrumentIndex, int filterSetIndex, int emissionFilterRefIndex) Set the EmissionFilterRef property of FilterSet.voidsetFilterSetExcitationFilterRef(String excitationFilter, int instrumentIndex, int filterSetIndex, int excitationFilterRefIndex) Set the ExcitationFilterRef property of FilterSet.voidsetFilterSetID(String id, int instrumentIndex, int filterSetIndex) Set the ID property of FilterSet.voidsetFilterSetLotNumber(String lotNumber, int instrumentIndex, int filterSetIndex) Set the LotNumber property of FilterSet.voidsetFilterSetManufacturer(String manufacturer, int instrumentIndex, int filterSetIndex) Set the Manufacturer property of FilterSet.voidsetFilterSetModel(String model, int instrumentIndex, int filterSetIndex) Set the Model property of FilterSet.voidsetFilterSetSerialNumber(String serialNumber, int instrumentIndex, int filterSetIndex) Set the SerialNumber property of FilterSet.voidsetFilterType(FilterType type, int instrumentIndex, int filterIndex) Set the Type property of Filter.voidsetFolderAnnotationRef(String annotation, int folderIndex, int annotationRefIndex) Set the AnnotationRef property of Folder.voidsetFolderDescription(String description, int folderIndex) Set the Description property of Folder.voidsetFolderFolderRef(String folder, int folderIndex, int folderRefIndex) Set the FolderRef property of Folder.voidsetFolderID(String id, int folderIndex) Set the ID property of Folder.voidsetFolderImageRef(String image, int folderIndex, int imageRefIndex) Set the ImageRef property of Folder.voidsetFolderName(String name, int folderIndex) Set the Name property of Folder.voidsetFolderROIRef(String roi, int folderIndex, int ROIRefIndex) Set the ROIRef property of Folder.voidsetGenericExcitationSourceAnnotationRef(String annotation, int instrumentIndex, int lightSourceIndex, int annotationRefIndex) Set the AnnotationRef property of GenericExcitationSource.voidsetGenericExcitationSourceID(String id, int instrumentIndex, int lightSourceIndex) Set the ID property of GenericExcitationSource.voidsetGenericExcitationSourceLotNumber(String lotNumber, int instrumentIndex, int lightSourceIndex) Set the LotNumber property of GenericExcitationSource.voidsetGenericExcitationSourceManufacturer(String manufacturer, int instrumentIndex, int lightSourceIndex) Set the Manufacturer property of GenericExcitationSource.voidsetGenericExcitationSourceMap(List<MapPair> map, int instrumentIndex, int lightSourceIndex) Set the MapAnnotation values of a GenericExcitationSource.voidsetGenericExcitationSourceModel(String model, int instrumentIndex, int lightSourceIndex) Set the Model property of GenericExcitationSource.voidsetGenericExcitationSourcePower(Power power, int instrumentIndex, int lightSourceIndex) Set the Power property of GenericExcitationSource.voidsetGenericExcitationSourceSerialNumber(String serialNumber, int instrumentIndex, int lightSourceIndex) Set the SerialNumber property of GenericExcitationSource.voidsetImageAcquisitionDate(Timestamp acquisitionDate, int imageIndex) Set the AcquisitionDate property of Image.voidsetImageAnnotationRef(String annotation, int imageIndex, int annotationRefIndex) Set the AnnotationRef property of Image.voidsetImageDescription(String description, int imageIndex) Set the Description property of Image.voidsetImageExperimenterGroupRef(String experimenterGroup, int imageIndex) Set the ExperimenterGroupRef property of Image.voidsetImageExperimenterRef(String experimenter, int imageIndex) Set the ExperimenterRef property of Image.voidsetImageExperimentRef(String experiment, int imageIndex) Set the ExperimentRef property of Image.voidsetImageID(String id, int imageIndex) Set the ID property of Image.voidsetImageInstrumentRef(String instrument, int imageIndex) Set the InstrumentRef property of Image.voidsetImageMicrobeamManipulationRef(String microbeamManipulation, int imageIndex, int microbeamManipulationRefIndex) Set the MicrobeamManipulationRef property of Image.voidsetImageName(String name, int imageIndex) Set the Name property of Image.voidsetImageROIRef(String roi, int imageIndex, int ROIRefIndex) Set the ROIRef property of Image.voidsetImagingEnvironmentAirPressure(Pressure airPressure, int imageIndex) Set the AirPressure property of ImagingEnvironment.voidsetImagingEnvironmentCO2Percent(PercentFraction co2Percent, int imageIndex) Set the CO2Percent property of ImagingEnvironment.voidsetImagingEnvironmentHumidity(PercentFraction humidity, int imageIndex) Set the Humidity property of ImagingEnvironment.voidsetImagingEnvironmentMap(List<MapPair> map, int imageIndex) Set the MapAnnotation values of an ImagingEnvironment.voidsetImagingEnvironmentTemperature(Temperature temperature, int imageIndex) Set the Temperature property of ImagingEnvironment.voidsetInstrumentAnnotationRef(String annotation, int instrumentIndex, int annotationRefIndex) Set the AnnotationRef property of Instrument.voidsetInstrumentID(String id, int instrumentIndex) Set the ID property of Instrument.voidsetLabelAnnotationRef(String annotation, int ROIIndex, int shapeIndex, int annotationRefIndex) Set the AnnotationRef property of Label.voidsetLabelFillColor(Color fillColor, int ROIIndex, int shapeIndex) Set the FillColor property of Label.voidsetLabelFillRule(FillRule fillRule, int ROIIndex, int shapeIndex) Set the FillRule property of Label.voidsetLabelFontFamily(FontFamily fontFamily, int ROIIndex, int shapeIndex) Set the FontFamily property of Label.voidsetLabelFontSize(Length fontSize, int ROIIndex, int shapeIndex) Set the FontSize property of Label.voidsetLabelFontStyle(FontStyle fontStyle, int ROIIndex, int shapeIndex) Set the FontStyle property of Label.voidsetLabelID(String id, int ROIIndex, int shapeIndex) Set the ID property of Label.voidsetLabelLocked(Boolean locked, int ROIIndex, int shapeIndex) Set the Locked property of Label.voidsetLabelStrokeColor(Color strokeColor, int ROIIndex, int shapeIndex) Set the StrokeColor property of Label.voidsetLabelStrokeDashArray(String strokeDashArray, int ROIIndex, int shapeIndex) Set the StrokeDashArray property of Label.voidsetLabelStrokeWidth(Length strokeWidth, int ROIIndex, int shapeIndex) Set the StrokeWidth property of Label.voidsetLabelText(String text, int ROIIndex, int shapeIndex) Set the Text property of Label.voidsetLabelTheC(NonNegativeInteger theC, int ROIIndex, int shapeIndex) Set the TheC property of Label.voidsetLabelTheT(NonNegativeInteger theT, int ROIIndex, int shapeIndex) Set the TheT property of Label.voidsetLabelTheZ(NonNegativeInteger theZ, int ROIIndex, int shapeIndex) Set the TheZ property of Label.voidsetLabelTransform(AffineTransform transform, int ROIIndex, int shapeIndex) Set the Transform property of Label.voidSet the X property of Label.voidSet the Y property of Label.voidsetLaserAnnotationRef(String annotation, int instrumentIndex, int lightSourceIndex, int annotationRefIndex) Set the AnnotationRef property of Laser.voidsetLaserFrequencyMultiplication(PositiveInteger frequencyMultiplication, int instrumentIndex, int lightSourceIndex) Set the FrequencyMultiplication property of Laser.voidsetLaserID(String id, int instrumentIndex, int lightSourceIndex) Set the ID property of Laser.voidsetLaserLaserMedium(LaserMedium laserMedium, int instrumentIndex, int lightSourceIndex) Set the LaserMedium property of Laser.voidsetLaserLotNumber(String lotNumber, int instrumentIndex, int lightSourceIndex) Set the LotNumber property of Laser.voidsetLaserManufacturer(String manufacturer, int instrumentIndex, int lightSourceIndex) Set the Manufacturer property of Laser.voidsetLaserModel(String model, int instrumentIndex, int lightSourceIndex) Set the Model property of Laser.voidsetLaserPockelCell(Boolean pockelCell, int instrumentIndex, int lightSourceIndex) Set the PockelCell property of Laser.voidsetLaserPower(Power power, int instrumentIndex, int lightSourceIndex) Set the Power property of Laser.voidsetLaserPulse(Pulse pulse, int instrumentIndex, int lightSourceIndex) Set the Pulse property of Laser.voidsetLaserPump(String pump, int instrumentIndex, int lightSourceIndex) Set the Pump property of Laser.voidsetLaserRepetitionRate(Frequency repetitionRate, int instrumentIndex, int lightSourceIndex) Set the RepetitionRate property of Laser.voidsetLaserSerialNumber(String serialNumber, int instrumentIndex, int lightSourceIndex) Set the SerialNumber property of Laser.voidsetLaserTuneable(Boolean tuneable, int instrumentIndex, int lightSourceIndex) Set the Tuneable property of Laser.voidsetLaserType(LaserType type, int instrumentIndex, int lightSourceIndex) Set the Type property of Laser.voidsetLaserWavelength(Length wavelength, int instrumentIndex, int lightSourceIndex) Set the Wavelength property of Laser.voidsetLightEmittingDiodeAnnotationRef(String annotation, int instrumentIndex, int lightSourceIndex, int annotationRefIndex) Set the AnnotationRef property of LightEmittingDiode.voidsetLightEmittingDiodeID(String id, int instrumentIndex, int lightSourceIndex) Set the ID property of LightEmittingDiode.voidsetLightEmittingDiodeLotNumber(String lotNumber, int instrumentIndex, int lightSourceIndex) Set the LotNumber property of LightEmittingDiode.voidsetLightEmittingDiodeManufacturer(String manufacturer, int instrumentIndex, int lightSourceIndex) Set the Manufacturer property of LightEmittingDiode.voidsetLightEmittingDiodeModel(String model, int instrumentIndex, int lightSourceIndex) Set the Model property of LightEmittingDiode.voidsetLightEmittingDiodePower(Power power, int instrumentIndex, int lightSourceIndex) Set the Power property of LightEmittingDiode.voidsetLightEmittingDiodeSerialNumber(String serialNumber, int instrumentIndex, int lightSourceIndex) Set the SerialNumber property of LightEmittingDiode.voidsetLightPathAnnotationRef(String annotation, int imageIndex, int channelIndex, int annotationRefIndex) Set the AnnotationRef property of LightPath.voidsetLightPathDichroicRef(String dichroic, int imageIndex, int channelIndex) Set the DichroicRef property of LightPath.voidsetLightPathEmissionFilterRef(String emissionFilter, int imageIndex, int channelIndex, int emissionFilterRefIndex) Set the EmissionFilterRef property of LightPath.voidsetLightPathExcitationFilterRef(String excitationFilter, int imageIndex, int channelIndex, int excitationFilterRefIndex) Set the ExcitationFilterRef property of LightPath.voidsetLineAnnotationRef(String annotation, int ROIIndex, int shapeIndex, int annotationRefIndex) Set the AnnotationRef property of Line.voidsetLineFillColor(Color fillColor, int ROIIndex, int shapeIndex) Set the FillColor property of Line.voidsetLineFillRule(FillRule fillRule, int ROIIndex, int shapeIndex) Set the FillRule property of Line.voidsetLineFontFamily(FontFamily fontFamily, int ROIIndex, int shapeIndex) Set the FontFamily property of Line.voidsetLineFontSize(Length fontSize, int ROIIndex, int shapeIndex) Set the FontSize property of Line.voidsetLineFontStyle(FontStyle fontStyle, int ROIIndex, int shapeIndex) Set the FontStyle property of Line.voidSet the ID property of Line.voidsetLineLocked(Boolean locked, int ROIIndex, int shapeIndex) Set the Locked property of Line.voidsetLineMarkerEnd(Marker markerEnd, int ROIIndex, int shapeIndex) Set the MarkerEnd property of Line.voidsetLineMarkerStart(Marker markerStart, int ROIIndex, int shapeIndex) Set the MarkerStart property of Line.voidsetLineStrokeColor(Color strokeColor, int ROIIndex, int shapeIndex) Set the StrokeColor property of Line.voidsetLineStrokeDashArray(String strokeDashArray, int ROIIndex, int shapeIndex) Set the StrokeDashArray property of Line.voidsetLineStrokeWidth(Length strokeWidth, int ROIIndex, int shapeIndex) Set the StrokeWidth property of Line.voidsetLineText(String text, int ROIIndex, int shapeIndex) Set the Text property of Line.voidsetLineTheC(NonNegativeInteger theC, int ROIIndex, int shapeIndex) Set the TheC property of Line.voidsetLineTheT(NonNegativeInteger theT, int ROIIndex, int shapeIndex) Set the TheT property of Line.voidsetLineTheZ(NonNegativeInteger theZ, int ROIIndex, int shapeIndex) Set the TheZ property of Line.voidsetLineTransform(AffineTransform transform, int ROIIndex, int shapeIndex) Set the Transform property of Line.voidSet the X1 property of Line.voidSet the X2 property of Line.voidSet the Y1 property of Line.voidSet the Y2 property of Line.voidsetListAnnotationAnnotationRef(String annotation, int listAnnotationIndex, int annotationRefIndex) Set the AnnotationRef property of ListAnnotation.voidsetListAnnotationAnnotator(String annotator, int listAnnotationIndex) Set the Annotator property of ListAnnotation.voidsetListAnnotationDescription(String description, int listAnnotationIndex) Set the Description property of ListAnnotation.voidsetListAnnotationID(String id, int listAnnotationIndex) Set the ID property of ListAnnotation.voidsetListAnnotationNamespace(String namespace, int listAnnotationIndex) Set the Namespace property of ListAnnotation.voidsetLongAnnotationAnnotationRef(String annotation, int longAnnotationIndex, int annotationRefIndex) Set the AnnotationRef property of LongAnnotation.voidsetLongAnnotationAnnotator(String annotator, int longAnnotationIndex) Set the Annotator property of LongAnnotation.voidsetLongAnnotationDescription(String description, int longAnnotationIndex) Set the Description property of LongAnnotation.voidsetLongAnnotationID(String id, int longAnnotationIndex) Set the ID property of LongAnnotation.voidsetLongAnnotationNamespace(String namespace, int longAnnotationIndex) Set the Namespace property of LongAnnotation.voidsetLongAnnotationValue(Long value, int longAnnotationIndex) Set the Value property of LongAnnotation.voidsetMapAnnotationAnnotationRef(String annotation, int mapAnnotationIndex, int annotationRefIndex) Set the AnnotationRef property of MapAnnotation.voidsetMapAnnotationAnnotator(String annotator, int mapAnnotationIndex) Set the Annotator property of MapAnnotation.voidsetMapAnnotationDescription(String description, int mapAnnotationIndex) Set the Description property of MapAnnotation.voidsetMapAnnotationID(String id, int mapAnnotationIndex) Set the ID property of MapAnnotation.voidsetMapAnnotationNamespace(String namespace, int mapAnnotationIndex) Set the Namespace property of MapAnnotation.voidsetMapAnnotationValue(List<MapPair> value, int mapAnnotationIndex) Set the values of a MapAnnotation.voidsetMaskAnnotationRef(String annotation, int ROIIndex, int shapeIndex, int annotationRefIndex) Set the AnnotationRef property of Mask.voidsetMaskBinData(byte[] base64Binary, int ROIIndex, int shapeIndex) Set the Base64Binary property of BinData.voidsetMaskBinDataBigEndian(Boolean bigEndian, int ROIIndex, int shapeIndex) Set the BigEndian property of BinData.voidsetMaskBinDataCompression(Compression compression, int ROIIndex, int shapeIndex) Set the Compression property of BinData.voidsetMaskBinDataLength(NonNegativeLong length, int ROIIndex, int shapeIndex) Set the Length property of BinData.voidsetMaskFillColor(Color fillColor, int ROIIndex, int shapeIndex) Set the FillColor property of Mask.voidsetMaskFillRule(FillRule fillRule, int ROIIndex, int shapeIndex) Set the FillRule property of Mask.voidsetMaskFontFamily(FontFamily fontFamily, int ROIIndex, int shapeIndex) Set the FontFamily property of Mask.voidsetMaskFontSize(Length fontSize, int ROIIndex, int shapeIndex) Set the FontSize property of Mask.voidsetMaskFontStyle(FontStyle fontStyle, int ROIIndex, int shapeIndex) Set the FontStyle property of Mask.voidsetMaskHeight(Double height, int ROIIndex, int shapeIndex) Set the Height property of Mask.voidSet the ID property of Mask.voidsetMaskLocked(Boolean locked, int ROIIndex, int shapeIndex) Set the Locked property of Mask.voidsetMaskStrokeColor(Color strokeColor, int ROIIndex, int shapeIndex) Set the StrokeColor property of Mask.voidsetMaskStrokeDashArray(String strokeDashArray, int ROIIndex, int shapeIndex) Set the StrokeDashArray property of Mask.voidsetMaskStrokeWidth(Length strokeWidth, int ROIIndex, int shapeIndex) Set the StrokeWidth property of Mask.voidsetMaskText(String text, int ROIIndex, int shapeIndex) Set the Text property of Mask.voidsetMaskTheC(NonNegativeInteger theC, int ROIIndex, int shapeIndex) Set the TheC property of Mask.voidsetMaskTheT(NonNegativeInteger theT, int ROIIndex, int shapeIndex) Set the TheT property of Mask.voidsetMaskTheZ(NonNegativeInteger theZ, int ROIIndex, int shapeIndex) Set the TheZ property of Mask.voidsetMaskTransform(AffineTransform transform, int ROIIndex, int shapeIndex) Set the Transform property of Mask.voidsetMaskWidth(Double width, int ROIIndex, int shapeIndex) Set the Width property of Mask.voidSet the X property of Mask.voidSet the Y property of Mask.voidsetMicrobeamManipulationDescription(String description, int experimentIndex, int microbeamManipulationIndex) Set the Description property of MicrobeamManipulation.voidsetMicrobeamManipulationExperimenterRef(String experimenter, int experimentIndex, int microbeamManipulationIndex) Set the ExperimenterRef property of MicrobeamManipulation.voidsetMicrobeamManipulationID(String id, int experimentIndex, int microbeamManipulationIndex) Set the ID property of MicrobeamManipulation.voidsetMicrobeamManipulationLightSourceSettingsAttenuation(PercentFraction attenuation, int experimentIndex, int microbeamManipulationIndex, int lightSourceSettingsIndex) Set the Attenuation property of LightSourceSettings.voidsetMicrobeamManipulationLightSourceSettingsID(String id, int experimentIndex, int microbeamManipulationIndex, int lightSourceSettingsIndex) Set the ID property of LightSourceSettings.voidsetMicrobeamManipulationLightSourceSettingsWavelength(Length wavelength, int experimentIndex, int microbeamManipulationIndex, int lightSourceSettingsIndex) Set the Wavelength property of LightSourceSettings.voidsetMicrobeamManipulationROIRef(String roi, int experimentIndex, int microbeamManipulationIndex, int ROIRefIndex) Set the ROIRef property of MicrobeamManipulation.voidsetMicrobeamManipulationType(MicrobeamManipulationType type, int experimentIndex, int microbeamManipulationIndex) Set the Type property of MicrobeamManipulation.voidsetMicroscopeLotNumber(String lotNumber, int instrumentIndex) Set the LotNumber property of Microscope.voidsetMicroscopeManufacturer(String manufacturer, int instrumentIndex) Set the Manufacturer property of Microscope.voidsetMicroscopeModel(String model, int instrumentIndex) Set the Model property of Microscope.voidsetMicroscopeSerialNumber(String serialNumber, int instrumentIndex) Set the SerialNumber property of Microscope.voidsetMicroscopeType(MicroscopeType type, int instrumentIndex) Set the Type property of Microscope.voidsetObjectiveAnnotationRef(String annotation, int instrumentIndex, int objectiveIndex, int annotationRefIndex) Set the AnnotationRef property of Objective.voidsetObjectiveCalibratedMagnification(Double calibratedMagnification, int instrumentIndex, int objectiveIndex) Set the CalibratedMagnification property of Objective.voidsetObjectiveCorrection(Correction correction, int instrumentIndex, int objectiveIndex) Set the Correction property of Objective.voidsetObjectiveID(String id, int instrumentIndex, int objectiveIndex) Set the ID property of Objective.voidsetObjectiveImmersion(Immersion immersion, int instrumentIndex, int objectiveIndex) Set the Immersion property of Objective.voidsetObjectiveIris(Boolean iris, int instrumentIndex, int objectiveIndex) Set the Iris property of Objective.voidsetObjectiveLensNA(Double lensNA, int instrumentIndex, int objectiveIndex) Set the LensNA property of Objective.voidsetObjectiveLotNumber(String lotNumber, int instrumentIndex, int objectiveIndex) Set the LotNumber property of Objective.voidsetObjectiveManufacturer(String manufacturer, int instrumentIndex, int objectiveIndex) Set the Manufacturer property of Objective.voidsetObjectiveModel(String model, int instrumentIndex, int objectiveIndex) Set the Model property of Objective.voidsetObjectiveNominalMagnification(Double nominalMagnification, int instrumentIndex, int objectiveIndex) Set the NominalMagnification property of Objective.voidsetObjectiveSerialNumber(String serialNumber, int instrumentIndex, int objectiveIndex) Set the SerialNumber property of Objective.voidsetObjectiveSettingsCorrectionCollar(Double correctionCollar, int imageIndex) Set the CorrectionCollar property of ObjectiveSettings.voidsetObjectiveSettingsID(String id, int imageIndex) Set the ID property of ObjectiveSettings.voidsetObjectiveSettingsMedium(Medium medium, int imageIndex) Set the Medium property of ObjectiveSettings.voidsetObjectiveSettingsRefractiveIndex(Double refractiveIndex, int imageIndex) Set the RefractiveIndex property of ObjectiveSettings.voidsetObjectiveWorkingDistance(Length workingDistance, int instrumentIndex, int objectiveIndex) Set the WorkingDistance property of Objective.voidsetPixelsBigEndian(Boolean bigEndian, int imageIndex) Set the BigEndian property of Pixels.voidsetPixelsBinData(byte[] base64Binary, int imageIndex, int binDataIndex) Set the Base64Binary property of BinData.voidsetPixelsBinDataBigEndian(Boolean bigEndian, int imageIndex, int binDataIndex) Set the BigEndian property of BinData.voidsetPixelsBinDataCompression(Compression compression, int imageIndex, int binDataIndex) Set the Compression property of BinData.voidsetPixelsBinDataLength(NonNegativeLong length, int imageIndex, int binDataIndex) Set the Length property of BinData.voidsetPixelsDimensionOrder(DimensionOrder dimensionOrder, int imageIndex) Set the DimensionOrder property of Pixels.voidsetPixelsID(String id, int imageIndex) Set the ID property of Pixels.voidsetPixelsInterleaved(Boolean interleaved, int imageIndex) Set the Interleaved property of Pixels.voidsetPixelsPhysicalSizeX(Length physicalSizeX, int imageIndex) Set the PhysicalSizeX property of Pixels.voidsetPixelsPhysicalSizeY(Length physicalSizeY, int imageIndex) Set the PhysicalSizeY property of Pixels.voidsetPixelsPhysicalSizeZ(Length physicalSizeZ, int imageIndex) Set the PhysicalSizeZ property of Pixels.voidsetPixelsSignificantBits(PositiveInteger significantBits, int imageIndex) Set the SignificantBits property of Pixels.voidsetPixelsSizeC(PositiveInteger sizeC, int imageIndex) Set the SizeC property of Pixels.voidsetPixelsSizeT(PositiveInteger sizeT, int imageIndex) Set the SizeT property of Pixels.voidsetPixelsSizeX(PositiveInteger sizeX, int imageIndex) Set the SizeX property of Pixels.voidsetPixelsSizeY(PositiveInteger sizeY, int imageIndex) Set the SizeY property of Pixels.voidsetPixelsSizeZ(PositiveInteger sizeZ, int imageIndex) Set the SizeZ property of Pixels.voidsetPixelsTimeIncrement(Time timeIncrement, int imageIndex) Set the TimeIncrement property of Pixels.voidsetPixelsType(PixelType type, int imageIndex) Set the Type property of Pixels.voidsetPlaneAnnotationRef(String annotation, int imageIndex, int planeIndex, int annotationRefIndex) Set the AnnotationRef property of Plane.voidsetPlaneDeltaT(Time deltaT, int imageIndex, int planeIndex) Set the DeltaT property of Plane.voidsetPlaneExposureTime(Time exposureTime, int imageIndex, int planeIndex) Set the ExposureTime property of Plane.voidsetPlaneHashSHA1(String hashSHA1, int imageIndex, int planeIndex) Set the HashSHA1 property of Plane.voidsetPlanePositionX(Length positionX, int imageIndex, int planeIndex) Set the PositionX property of Plane.voidsetPlanePositionY(Length positionY, int imageIndex, int planeIndex) Set the PositionY property of Plane.voidsetPlanePositionZ(Length positionZ, int imageIndex, int planeIndex) Set the PositionZ property of Plane.voidsetPlaneTheC(NonNegativeInteger theC, int imageIndex, int planeIndex) Set the TheC property of Plane.voidsetPlaneTheT(NonNegativeInteger theT, int imageIndex, int planeIndex) Set the TheT property of Plane.voidsetPlaneTheZ(NonNegativeInteger theZ, int imageIndex, int planeIndex) Set the TheZ property of Plane.voidsetPlateAcquisitionAnnotationRef(String annotation, int plateIndex, int plateAcquisitionIndex, int annotationRefIndex) Set the AnnotationRef property of PlateAcquisition.voidsetPlateAcquisitionDescription(String description, int plateIndex, int plateAcquisitionIndex) Set the Description property of PlateAcquisition.voidsetPlateAcquisitionEndTime(Timestamp endTime, int plateIndex, int plateAcquisitionIndex) Set the EndTime property of PlateAcquisition.voidsetPlateAcquisitionID(String id, int plateIndex, int plateAcquisitionIndex) Set the ID property of PlateAcquisition.voidsetPlateAcquisitionMaximumFieldCount(PositiveInteger maximumFieldCount, int plateIndex, int plateAcquisitionIndex) Set the MaximumFieldCount property of PlateAcquisition.voidsetPlateAcquisitionName(String name, int plateIndex, int plateAcquisitionIndex) Set the Name property of PlateAcquisition.voidsetPlateAcquisitionStartTime(Timestamp startTime, int plateIndex, int plateAcquisitionIndex) Set the StartTime property of PlateAcquisition.voidsetPlateAcquisitionWellSampleRef(String wellSample, int plateIndex, int plateAcquisitionIndex, int wellSampleRefIndex) Set the WellSampleRef property of PlateAcquisition.voidsetPlateAnnotationRef(String annotation, int plateIndex, int annotationRefIndex) Set the AnnotationRef property of Plate.voidsetPlateColumnNamingConvention(NamingConvention columnNamingConvention, int plateIndex) Set the ColumnNamingConvention property of Plate.voidsetPlateColumns(PositiveInteger columns, int plateIndex) Set the Columns property of Plate.voidsetPlateDescription(String description, int plateIndex) Set the Description property of Plate.voidsetPlateExternalIdentifier(String externalIdentifier, int plateIndex) Set the ExternalIdentifier property of Plate.voidsetPlateFieldIndex(NonNegativeInteger fieldIndex, int plateIndex) Set the FieldIndex property of Plate.voidsetPlateID(String id, int plateIndex) Set the ID property of Plate.voidsetPlateName(String name, int plateIndex) Set the Name property of Plate.voidsetPlateRowNamingConvention(NamingConvention rowNamingConvention, int plateIndex) Set the RowNamingConvention property of Plate.voidsetPlateRows(PositiveInteger rows, int plateIndex) Set the Rows property of Plate.voidsetPlateStatus(String status, int plateIndex) Set the Status property of Plate.voidsetPlateWellOriginX(Length wellOriginX, int plateIndex) Set the WellOriginX property of Plate.voidsetPlateWellOriginY(Length wellOriginY, int plateIndex) Set the WellOriginY property of Plate.voidsetPointAnnotationRef(String annotation, int ROIIndex, int shapeIndex, int annotationRefIndex) Set the AnnotationRef property of Point.voidsetPointFillColor(Color fillColor, int ROIIndex, int shapeIndex) Set the FillColor property of Point.voidsetPointFillRule(FillRule fillRule, int ROIIndex, int shapeIndex) Set the FillRule property of Point.voidsetPointFontFamily(FontFamily fontFamily, int ROIIndex, int shapeIndex) Set the FontFamily property of Point.voidsetPointFontSize(Length fontSize, int ROIIndex, int shapeIndex) Set the FontSize property of Point.voidsetPointFontStyle(FontStyle fontStyle, int ROIIndex, int shapeIndex) Set the FontStyle property of Point.voidsetPointID(String id, int ROIIndex, int shapeIndex) Set the ID property of Point.voidsetPointLocked(Boolean locked, int ROIIndex, int shapeIndex) Set the Locked property of Point.voidsetPointStrokeColor(Color strokeColor, int ROIIndex, int shapeIndex) Set the StrokeColor property of Point.voidsetPointStrokeDashArray(String strokeDashArray, int ROIIndex, int shapeIndex) Set the StrokeDashArray property of Point.voidsetPointStrokeWidth(Length strokeWidth, int ROIIndex, int shapeIndex) Set the StrokeWidth property of Point.voidsetPointText(String text, int ROIIndex, int shapeIndex) Set the Text property of Point.voidsetPointTheC(NonNegativeInteger theC, int ROIIndex, int shapeIndex) Set the TheC property of Point.voidsetPointTheT(NonNegativeInteger theT, int ROIIndex, int shapeIndex) Set the TheT property of Point.voidsetPointTheZ(NonNegativeInteger theZ, int ROIIndex, int shapeIndex) Set the TheZ property of Point.voidsetPointTransform(AffineTransform transform, int ROIIndex, int shapeIndex) Set the Transform property of Point.voidSet the X property of Point.voidSet the Y property of Point.voidsetPolygonAnnotationRef(String annotation, int ROIIndex, int shapeIndex, int annotationRefIndex) Set the AnnotationRef property of Polygon.voidsetPolygonFillColor(Color fillColor, int ROIIndex, int shapeIndex) Set the FillColor property of Polygon.voidsetPolygonFillRule(FillRule fillRule, int ROIIndex, int shapeIndex) Set the FillRule property of Polygon.voidsetPolygonFontFamily(FontFamily fontFamily, int ROIIndex, int shapeIndex) Set the FontFamily property of Polygon.voidsetPolygonFontSize(Length fontSize, int ROIIndex, int shapeIndex) Set the FontSize property of Polygon.voidsetPolygonFontStyle(FontStyle fontStyle, int ROIIndex, int shapeIndex) Set the FontStyle property of Polygon.voidsetPolygonID(String id, int ROIIndex, int shapeIndex) Set the ID property of Polygon.voidsetPolygonLocked(Boolean locked, int ROIIndex, int shapeIndex) Set the Locked property of Polygon.voidsetPolygonPoints(String points, int ROIIndex, int shapeIndex) Set the Points property of Polygon.voidsetPolygonStrokeColor(Color strokeColor, int ROIIndex, int shapeIndex) Set the StrokeColor property of Polygon.voidsetPolygonStrokeDashArray(String strokeDashArray, int ROIIndex, int shapeIndex) Set the StrokeDashArray property of Polygon.voidsetPolygonStrokeWidth(Length strokeWidth, int ROIIndex, int shapeIndex) Set the StrokeWidth property of Polygon.voidsetPolygonText(String text, int ROIIndex, int shapeIndex) Set the Text property of Polygon.voidsetPolygonTheC(NonNegativeInteger theC, int ROIIndex, int shapeIndex) Set the TheC property of Polygon.voidsetPolygonTheT(NonNegativeInteger theT, int ROIIndex, int shapeIndex) Set the TheT property of Polygon.voidsetPolygonTheZ(NonNegativeInteger theZ, int ROIIndex, int shapeIndex) Set the TheZ property of Polygon.voidsetPolygonTransform(AffineTransform transform, int ROIIndex, int shapeIndex) Set the Transform property of Polygon.voidsetPolylineAnnotationRef(String annotation, int ROIIndex, int shapeIndex, int annotationRefIndex) Set the AnnotationRef property of Polyline.voidsetPolylineFillColor(Color fillColor, int ROIIndex, int shapeIndex) Set the FillColor property of Polyline.voidsetPolylineFillRule(FillRule fillRule, int ROIIndex, int shapeIndex) Set the FillRule property of Polyline.voidsetPolylineFontFamily(FontFamily fontFamily, int ROIIndex, int shapeIndex) Set the FontFamily property of Polyline.voidsetPolylineFontSize(Length fontSize, int ROIIndex, int shapeIndex) Set the FontSize property of Polyline.voidsetPolylineFontStyle(FontStyle fontStyle, int ROIIndex, int shapeIndex) Set the FontStyle property of Polyline.voidsetPolylineID(String id, int ROIIndex, int shapeIndex) Set the ID property of Polyline.voidsetPolylineLocked(Boolean locked, int ROIIndex, int shapeIndex) Set the Locked property of Polyline.voidsetPolylineMarkerEnd(Marker markerEnd, int ROIIndex, int shapeIndex) Set the MarkerEnd property of Polyline.voidsetPolylineMarkerStart(Marker markerStart, int ROIIndex, int shapeIndex) Set the MarkerStart property of Polyline.voidsetPolylinePoints(String points, int ROIIndex, int shapeIndex) Set the Points property of Polyline.voidsetPolylineStrokeColor(Color strokeColor, int ROIIndex, int shapeIndex) Set the StrokeColor property of Polyline.voidsetPolylineStrokeDashArray(String strokeDashArray, int ROIIndex, int shapeIndex) Set the StrokeDashArray property of Polyline.voidsetPolylineStrokeWidth(Length strokeWidth, int ROIIndex, int shapeIndex) Set the StrokeWidth property of Polyline.voidsetPolylineText(String text, int ROIIndex, int shapeIndex) Set the Text property of Polyline.voidsetPolylineTheC(NonNegativeInteger theC, int ROIIndex, int shapeIndex) Set the TheC property of Polyline.voidsetPolylineTheT(NonNegativeInteger theT, int ROIIndex, int shapeIndex) Set the TheT property of Polyline.voidsetPolylineTheZ(NonNegativeInteger theZ, int ROIIndex, int shapeIndex) Set the TheZ property of Polyline.voidsetPolylineTransform(AffineTransform transform, int ROIIndex, int shapeIndex) Set the Transform property of Polyline.voidsetProjectAnnotationRef(String annotation, int projectIndex, int annotationRefIndex) Set the AnnotationRef property of Project.voidsetProjectDatasetRef(String dataset, int projectIndex, int datasetRefIndex) Set the DatasetRef property of Project.voidsetProjectDescription(String description, int projectIndex) Set the Description property of Project.voidsetProjectExperimenterGroupRef(String experimenterGroup, int projectIndex) Set the ExperimenterGroupRef property of Project.voidsetProjectExperimenterRef(String experimenter, int projectIndex) Set the ExperimenterRef property of Project.voidsetProjectID(String id, int projectIndex) Set the ID property of Project.voidsetProjectName(String name, int projectIndex) Set the Name property of Project.voidsetReagentAnnotationRef(String annotation, int screenIndex, int reagentIndex, int annotationRefIndex) Set the AnnotationRef property of Reagent.voidsetReagentDescription(String description, int screenIndex, int reagentIndex) Set the Description property of Reagent.voidsetReagentID(String id, int screenIndex, int reagentIndex) Set the ID property of Reagent.voidsetReagentName(String name, int screenIndex, int reagentIndex) Set the Name property of Reagent.voidsetReagentReagentIdentifier(String reagentIdentifier, int screenIndex, int reagentIndex) Set the ReagentIdentifier property of Reagent.voidsetRectangleAnnotationRef(String annotation, int ROIIndex, int shapeIndex, int annotationRefIndex) Set the AnnotationRef property of Rectangle.voidsetRectangleFillColor(Color fillColor, int ROIIndex, int shapeIndex) Set the FillColor property of Rectangle.voidsetRectangleFillRule(FillRule fillRule, int ROIIndex, int shapeIndex) Set the FillRule property of Rectangle.voidsetRectangleFontFamily(FontFamily fontFamily, int ROIIndex, int shapeIndex) Set the FontFamily property of Rectangle.voidsetRectangleFontSize(Length fontSize, int ROIIndex, int shapeIndex) Set the FontSize property of Rectangle.voidsetRectangleFontStyle(FontStyle fontStyle, int ROIIndex, int shapeIndex) Set the FontStyle property of Rectangle.voidsetRectangleHeight(Double height, int ROIIndex, int shapeIndex) Set the Height property of Rectangle.voidsetRectangleID(String id, int ROIIndex, int shapeIndex) Set the ID property of Rectangle.voidsetRectangleLocked(Boolean locked, int ROIIndex, int shapeIndex) Set the Locked property of Rectangle.voidsetRectangleStrokeColor(Color strokeColor, int ROIIndex, int shapeIndex) Set the StrokeColor property of Rectangle.voidsetRectangleStrokeDashArray(String strokeDashArray, int ROIIndex, int shapeIndex) Set the StrokeDashArray property of Rectangle.voidsetRectangleStrokeWidth(Length strokeWidth, int ROIIndex, int shapeIndex) Set the StrokeWidth property of Rectangle.voidsetRectangleText(String text, int ROIIndex, int shapeIndex) Set the Text property of Rectangle.voidsetRectangleTheC(NonNegativeInteger theC, int ROIIndex, int shapeIndex) Set the TheC property of Rectangle.voidsetRectangleTheT(NonNegativeInteger theT, int ROIIndex, int shapeIndex) Set the TheT property of Rectangle.voidsetRectangleTheZ(NonNegativeInteger theZ, int ROIIndex, int shapeIndex) Set the TheZ property of Rectangle.voidsetRectangleTransform(AffineTransform transform, int ROIIndex, int shapeIndex) Set the Transform property of Rectangle.voidsetRectangleWidth(Double width, int ROIIndex, int shapeIndex) Set the Width property of Rectangle.voidsetRectangleX(Double x, int ROIIndex, int shapeIndex) Set the X property of Rectangle.voidsetRectangleY(Double y, int ROIIndex, int shapeIndex) Set the Y property of Rectangle.voidsetRightsRightsHeld(String rightsHeld) Set the RightsHeld property of Rights.voidsetRightsRightsHolder(String rightsHolder) Set the RightsHolder property of Rights.voidsetROIAnnotationRef(String annotation, int ROIIndex, int annotationRefIndex) Set the AnnotationRef property of ROI.voidsetROIDescription(String description, int ROIIndex) Set the Description property of ROI.voidSet the ID property of ROI.voidsetROIName(String name, int ROIIndex) Set the Name property of ROI.voidsetRoot(MetadataRoot root) Set the root node of the metadata.voidsetScreenAnnotationRef(String annotation, int screenIndex, int annotationRefIndex) Set the AnnotationRef property of Screen.voidsetScreenDescription(String description, int screenIndex) Set the Description property of Screen.voidsetScreenID(String id, int screenIndex) Set the ID property of Screen.voidsetScreenName(String name, int screenIndex) Set the Name property of Screen.voidsetScreenPlateRef(String plate, int screenIndex, int plateRefIndex) Set the PlateRef property of Screen.voidsetScreenProtocolDescription(String protocolDescription, int screenIndex) Set the ProtocolDescription property of Screen.voidsetScreenProtocolIdentifier(String protocolIdentifier, int screenIndex) Set the ProtocolIdentifier property of Screen.voidsetScreenReagentSetDescription(String reagentSetDescription, int screenIndex) Set the ReagentSetDescription property of Screen.voidsetScreenReagentSetIdentifier(String reagentSetIdentifier, int screenIndex) Set the ReagentSetIdentifier property of Screen.voidsetScreenType(String type, int screenIndex) Set the Type property of Screen.voidsetStageLabelName(String name, int imageIndex) Set the Name property of StageLabel.voidsetStageLabelX(Length x, int imageIndex) Set the X property of StageLabel.voidsetStageLabelY(Length y, int imageIndex) Set the Y property of StageLabel.voidsetStageLabelZ(Length z, int imageIndex) Set the Z property of StageLabel.voidsetTagAnnotationAnnotationRef(String annotation, int tagAnnotationIndex, int annotationRefIndex) Set the AnnotationRef property of TagAnnotation.voidsetTagAnnotationAnnotator(String annotator, int tagAnnotationIndex) Set the Annotator property of TagAnnotation.voidsetTagAnnotationDescription(String description, int tagAnnotationIndex) Set the Description property of TagAnnotation.voidsetTagAnnotationID(String id, int tagAnnotationIndex) Set the ID property of TagAnnotation.voidsetTagAnnotationNamespace(String namespace, int tagAnnotationIndex) Set the Namespace property of TagAnnotation.voidsetTagAnnotationValue(String value, int tagAnnotationIndex) Set the Value property of TagAnnotation.voidsetTermAnnotationAnnotationRef(String annotation, int termAnnotationIndex, int annotationRefIndex) Set the AnnotationRef property of TermAnnotation.voidsetTermAnnotationAnnotator(String annotator, int termAnnotationIndex) Set the Annotator property of TermAnnotation.voidsetTermAnnotationDescription(String description, int termAnnotationIndex) Set the Description property of TermAnnotation.voidsetTermAnnotationID(String id, int termAnnotationIndex) Set the ID property of TermAnnotation.voidsetTermAnnotationNamespace(String namespace, int termAnnotationIndex) Set the Namespace property of TermAnnotation.voidsetTermAnnotationValue(String value, int termAnnotationIndex) Set the Value property of TermAnnotation.voidsetTiffDataFirstC(NonNegativeInteger firstC, int imageIndex, int tiffDataIndex) Set the FirstC property of TiffData.voidsetTiffDataFirstT(NonNegativeInteger firstT, int imageIndex, int tiffDataIndex) Set the FirstT property of TiffData.voidsetTiffDataFirstZ(NonNegativeInteger firstZ, int imageIndex, int tiffDataIndex) Set the FirstZ property of TiffData.voidsetTiffDataIFD(NonNegativeInteger ifd, int imageIndex, int tiffDataIndex) Set the IFD property of TiffData.voidsetTiffDataPlaneCount(NonNegativeInteger planeCount, int imageIndex, int tiffDataIndex) Set the PlaneCount property of TiffData.voidsetTimestampAnnotationAnnotationRef(String annotation, int timestampAnnotationIndex, int annotationRefIndex) Set the AnnotationRef property of TimestampAnnotation.voidsetTimestampAnnotationAnnotator(String annotator, int timestampAnnotationIndex) Set the Annotator property of TimestampAnnotation.voidsetTimestampAnnotationDescription(String description, int timestampAnnotationIndex) Set the Description property of TimestampAnnotation.voidsetTimestampAnnotationID(String id, int timestampAnnotationIndex) Set the ID property of TimestampAnnotation.voidsetTimestampAnnotationNamespace(String namespace, int timestampAnnotationIndex) Set the Namespace property of TimestampAnnotation.voidsetTimestampAnnotationValue(Timestamp value, int timestampAnnotationIndex) Set the Value property of TimestampAnnotation.voidsetTransmittanceRangeCutIn(Length cutIn, int instrumentIndex, int filterIndex) Set the CutIn property of TransmittanceRange.voidsetTransmittanceRangeCutInTolerance(Length cutInTolerance, int instrumentIndex, int filterIndex) Set the CutInTolerance property of TransmittanceRange.voidsetTransmittanceRangeCutOut(Length cutOut, int instrumentIndex, int filterIndex) Set the CutOut property of TransmittanceRange.voidsetTransmittanceRangeCutOutTolerance(Length cutOutTolerance, int instrumentIndex, int filterIndex) Set the CutOutTolerance property of TransmittanceRange.voidsetTransmittanceRangeTransmittance(PercentFraction transmittance, int instrumentIndex, int filterIndex) Set the Transmittance property of TransmittanceRange.voidSet the UUID associated with this collection of metadata.voidsetUUIDFileName(String fileName, int imageIndex, int tiffDataIndex) Set the FileName property of UUID.voidsetUUIDValue(String value, int imageIndex, int tiffDataIndex) Set the text value of UUID.voidsetWellAnnotationRef(String annotation, int plateIndex, int wellIndex, int annotationRefIndex) Set the AnnotationRef property of Well.voidsetWellColor(Color color, int plateIndex, int wellIndex) Set the Color property of Well.voidsetWellColumn(NonNegativeInteger column, int plateIndex, int wellIndex) Set the Column property of Well.voidsetWellExternalDescription(String externalDescription, int plateIndex, int wellIndex) Set the ExternalDescription property of Well.voidsetWellExternalIdentifier(String externalIdentifier, int plateIndex, int wellIndex) Set the ExternalIdentifier property of Well.voidSet the ID property of Well.voidsetWellReagentRef(String reagent, int plateIndex, int wellIndex) Set the ReagentRef property of Well.voidsetWellRow(NonNegativeInteger row, int plateIndex, int wellIndex) Set the Row property of Well.voidsetWellSampleID(String id, int plateIndex, int wellIndex, int wellSampleIndex) Set the ID property of WellSample.voidsetWellSampleImageRef(String image, int plateIndex, int wellIndex, int wellSampleIndex) Set the ImageRef property of WellSample.voidsetWellSampleIndex(NonNegativeInteger index, int plateIndex, int wellIndex, int wellSampleIndex) Set the Index property of WellSample.voidsetWellSamplePositionX(Length positionX, int plateIndex, int wellIndex, int wellSampleIndex) Set the PositionX property of WellSample.voidsetWellSamplePositionY(Length positionY, int plateIndex, int wellIndex, int wellSampleIndex) Set the PositionY property of WellSample.voidsetWellSampleTimepoint(Timestamp timepoint, int plateIndex, int wellIndex, int wellSampleIndex) Set the Timepoint property of WellSample.voidsetWellType(String type, int plateIndex, int wellIndex) Set the Type property of Well.voidsetXMLAnnotationAnnotationRef(String annotation, int XMLAnnotationIndex, int annotationRefIndex) Set the AnnotationRef property of XMLAnnotation.voidsetXMLAnnotationAnnotator(String annotator, int XMLAnnotationIndex) Set the Annotator property of XMLAnnotation.voidsetXMLAnnotationDescription(String description, int XMLAnnotationIndex) Set the Description property of XMLAnnotation.voidsetXMLAnnotationID(String id, int XMLAnnotationIndex) Set the ID property of XMLAnnotation.voidsetXMLAnnotationNamespace(String namespace, int XMLAnnotationIndex) Set the Namespace property of XMLAnnotation.voidsetXMLAnnotationValue(String value, int XMLAnnotationIndex) Set the Value property of XMLAnnotation.
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Method Details
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createRoot
void createRoot()Create root node. The action taken here is specific to the concrete metadata implementation. -
getRoot
MetadataRoot getRoot()Get the root node of the metadata. Note that the root node type will be specific to the concrete metadata implementation.- Returns:
- the root node.
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setRoot
Set the root node of the metadata. Note that the root node type will be specific to the concrete metadata implementation. An exception will be thrown if the root node is of an incompatible type.- Parameters:
root- the root node.
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setMapAnnotationValue
Set the values of a MapAnnotation.- Parameters:
value- the MapAnnotation values to set.mapAnnotationIndex- the MapAnnotation index.
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setGenericExcitationSourceMap
Set the MapAnnotation values of a GenericExcitationSource.- Parameters:
map- the MapAnnotation values to set.instrumentIndex- the Instrument index.
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setImagingEnvironmentMap
Set the MapAnnotation values of an ImagingEnvironment.- Parameters:
map- the MapAnnotation values to set.imageIndex- the Image index.
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setUUID
Set the UUID associated with this collection of metadata.- Parameters:
uuid- the UUID to set.
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setCreator
Set the Creator associated with this collection of metadata.- Parameters:
creator- the Creator to set.
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setArcAnnotationRef
void setArcAnnotationRef(String annotation, int instrumentIndex, int lightSourceIndex, int annotationRefIndex) Set the AnnotationRef property of Arc.- Parameters:
annotation- AnnotationRef to set.instrumentIndex- the Instrument index.lightSourceIndex- the LightSource index.annotationRefIndex- AnnotationRef index (unused).
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setArcID
Set the ID property of Arc.- Parameters:
id- ID to set.instrumentIndex- the Instrument index.lightSourceIndex- the LightSource index.
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setArcLotNumber
Set the LotNumber property of Arc.- Parameters:
lotNumber- LotNumber to set.instrumentIndex- the Instrument index.lightSourceIndex- the LightSource index.
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setArcManufacturer
Set the Manufacturer property of Arc.- Parameters:
manufacturer- Manufacturer to set.instrumentIndex- the Instrument index.lightSourceIndex- the LightSource index.
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setArcModel
Set the Model property of Arc.- Parameters:
model- Model to set.instrumentIndex- the Instrument index.lightSourceIndex- the LightSource index.
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setArcPower
Set the Power property of Arc.- Parameters:
power- Power to set.instrumentIndex- the Instrument index.lightSourceIndex- the LightSource index.
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setArcSerialNumber
Set the SerialNumber property of Arc.- Parameters:
serialNumber- SerialNumber to set.instrumentIndex- the Instrument index.lightSourceIndex- the LightSource index.
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setArcType
Set the Type property of Arc.- Parameters:
type- Type to set.instrumentIndex- the Instrument index.lightSourceIndex- the LightSource index.
-
setBinaryFileBinData
void setBinaryFileBinData(byte[] base64Binary, int fileAnnotationIndex) Set the Base64Binary property of BinData.- Parameters:
base64Binary- Base64Binary to set.fileAnnotationIndex- the FileAnnotation index.
-
setMaskBinData
void setMaskBinData(byte[] base64Binary, int ROIIndex, int shapeIndex) Set the Base64Binary property of BinData.- Parameters:
base64Binary- Base64Binary to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
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setPixelsBinData
void setPixelsBinData(byte[] base64Binary, int imageIndex, int binDataIndex) Set the Base64Binary property of BinData.- Parameters:
base64Binary- Base64Binary to set.imageIndex- the Image index.binDataIndex- the BinData index.
-
setBinaryFileBinDataBigEndian
Set the BigEndian property of BinData.- Parameters:
bigEndian- BigEndian to set.fileAnnotationIndex- the FileAnnotation index.
-
setMaskBinDataBigEndian
Set the BigEndian property of BinData.- Parameters:
bigEndian- BigEndian to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPixelsBinDataBigEndian
Set the BigEndian property of BinData.- Parameters:
bigEndian- BigEndian to set.imageIndex- the Image index.binDataIndex- the BinData index.
-
setBinaryFileBinDataCompression
Set the Compression property of BinData.- Parameters:
compression- Compression to set.fileAnnotationIndex- the FileAnnotation index.
-
setMaskBinDataCompression
Set the Compression property of BinData.- Parameters:
compression- Compression to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPixelsBinDataCompression
Set the Compression property of BinData.- Parameters:
compression- Compression to set.imageIndex- the Image index.binDataIndex- the BinData index.
-
setBinaryFileBinDataLength
Set the Length property of BinData.- Parameters:
length- Length to set.fileAnnotationIndex- the FileAnnotation index.
-
setMaskBinDataLength
Set the Length property of BinData.- Parameters:
length- Length to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPixelsBinDataLength
Set the Length property of BinData.- Parameters:
length- Length to set.imageIndex- the Image index.binDataIndex- the BinData index.
-
setBinaryFileFileName
Set the FileName property of BinaryFile.- Parameters:
fileName- FileName to set.fileAnnotationIndex- the FileAnnotation index.
-
setBinaryFileMIMEType
Set the MIMEType property of BinaryFile.- Parameters:
mimeType- MIMEType to set.fileAnnotationIndex- the FileAnnotation index.
-
setBinaryFileSize
Set the Size property of BinaryFile.- Parameters:
size- Size to set.fileAnnotationIndex- the FileAnnotation index.
-
setBinaryOnlyMetadataFile
Set the MetadataFile property of BinaryOnly.- Parameters:
metadataFile- MetadataFile to set.
-
setBinaryOnlyUUID
Set the UUID property of BinaryOnly.- Parameters:
uuid- UUID to set.
-
setBooleanAnnotationAnnotationRef
void setBooleanAnnotationAnnotationRef(String annotation, int booleanAnnotationIndex, int annotationRefIndex) Set the AnnotationRef property of BooleanAnnotation.- Parameters:
annotation- AnnotationRef to set.booleanAnnotationIndex- the BooleanAnnotation index.annotationRefIndex- AnnotationRef index (unused).
-
setBooleanAnnotationAnnotator
Set the Annotator property of BooleanAnnotation.- Parameters:
annotator- Annotator to set.booleanAnnotationIndex- the BooleanAnnotation index.
-
setBooleanAnnotationDescription
Set the Description property of BooleanAnnotation.- Parameters:
description- Description to set.booleanAnnotationIndex- the BooleanAnnotation index.
-
setBooleanAnnotationID
Set the ID property of BooleanAnnotation.- Parameters:
id- ID to set.booleanAnnotationIndex- the BooleanAnnotation index.
-
setBooleanAnnotationNamespace
Set the Namespace property of BooleanAnnotation.- Parameters:
namespace- Namespace to set.booleanAnnotationIndex- the BooleanAnnotation index.
-
setBooleanAnnotationValue
Set the Value property of BooleanAnnotation.- Parameters:
value- Value to set.booleanAnnotationIndex- the BooleanAnnotation index.
-
setChannelAcquisitionMode
Set the AcquisitionMode property of Channel.- Parameters:
acquisitionMode- AcquisitionMode to set.imageIndex- the Image index.channelIndex- the Channel index.
-
setChannelAnnotationRef
void setChannelAnnotationRef(String annotation, int imageIndex, int channelIndex, int annotationRefIndex) Set the AnnotationRef property of Channel.- Parameters:
annotation- AnnotationRef to set.imageIndex- the Image index.channelIndex- the Channel index.annotationRefIndex- AnnotationRef index (unused).
-
setChannelColor
Set the Color property of Channel.- Parameters:
color- Color to set.imageIndex- the Image index.channelIndex- the Channel index.
-
setChannelContrastMethod
Set the ContrastMethod property of Channel.- Parameters:
contrastMethod- ContrastMethod to set.imageIndex- the Image index.channelIndex- the Channel index.
-
setChannelEmissionWavelength
Set the EmissionWavelength property of Channel.- Parameters:
emissionWavelength- EmissionWavelength to set.imageIndex- the Image index.channelIndex- the Channel index.
-
setChannelExcitationWavelength
Set the ExcitationWavelength property of Channel.- Parameters:
excitationWavelength- ExcitationWavelength to set.imageIndex- the Image index.channelIndex- the Channel index.
-
setChannelFilterSetRef
Set the FilterSetRef property of Channel.- Parameters:
filterSet- FilterSetRef to set.imageIndex- the Image index.channelIndex- the Channel index.
-
setChannelFluor
Set the Fluor property of Channel.- Parameters:
fluor- Fluor to set.imageIndex- the Image index.channelIndex- the Channel index.
-
setChannelID
Set the ID property of Channel.- Parameters:
id- ID to set.imageIndex- the Image index.channelIndex- the Channel index.
-
setChannelIlluminationType
void setChannelIlluminationType(IlluminationType illuminationType, int imageIndex, int channelIndex) Set the IlluminationType property of Channel.- Parameters:
illuminationType- IlluminationType to set.imageIndex- the Image index.channelIndex- the Channel index.
-
setChannelNDFilter
Set the NDFilter property of Channel.- Parameters:
ndFilter- NDFilter to set.imageIndex- the Image index.channelIndex- the Channel index.
-
setChannelName
Set the Name property of Channel.- Parameters:
name- Name to set.imageIndex- the Image index.channelIndex- the Channel index.
-
setChannelPinholeSize
Set the PinholeSize property of Channel.- Parameters:
pinholeSize- PinholeSize to set.imageIndex- the Image index.channelIndex- the Channel index.
-
setChannelPockelCellSetting
Set the PockelCellSetting property of Channel.- Parameters:
pockelCellSetting- PockelCellSetting to set.imageIndex- the Image index.channelIndex- the Channel index.
-
setChannelSamplesPerPixel
Set the SamplesPerPixel property of Channel.- Parameters:
samplesPerPixel- SamplesPerPixel to set.imageIndex- the Image index.channelIndex- the Channel index.
-
setCommentAnnotationAnnotationRef
void setCommentAnnotationAnnotationRef(String annotation, int commentAnnotationIndex, int annotationRefIndex) Set the AnnotationRef property of CommentAnnotation.- Parameters:
annotation- AnnotationRef to set.commentAnnotationIndex- the CommentAnnotation index.annotationRefIndex- AnnotationRef index (unused).
-
setCommentAnnotationAnnotator
Set the Annotator property of CommentAnnotation.- Parameters:
annotator- Annotator to set.commentAnnotationIndex- the CommentAnnotation index.
-
setCommentAnnotationDescription
Set the Description property of CommentAnnotation.- Parameters:
description- Description to set.commentAnnotationIndex- the CommentAnnotation index.
-
setCommentAnnotationID
Set the ID property of CommentAnnotation.- Parameters:
id- ID to set.commentAnnotationIndex- the CommentAnnotation index.
-
setCommentAnnotationNamespace
Set the Namespace property of CommentAnnotation.- Parameters:
namespace- Namespace to set.commentAnnotationIndex- the CommentAnnotation index.
-
setCommentAnnotationValue
Set the Value property of CommentAnnotation.- Parameters:
value- Value to set.commentAnnotationIndex- the CommentAnnotation index.
-
setDatasetAnnotationRef
Set the AnnotationRef property of Dataset.- Parameters:
annotation- AnnotationRef to set.datasetIndex- the Dataset index.annotationRefIndex- AnnotationRef index (unused).
-
setDatasetDescription
Set the Description property of Dataset.- Parameters:
description- Description to set.datasetIndex- the Dataset index.
-
setDatasetExperimenterGroupRef
Set the ExperimenterGroupRef property of Dataset.- Parameters:
experimenterGroup- ExperimenterGroupRef to set.datasetIndex- the Dataset index.
-
setDatasetExperimenterRef
Set the ExperimenterRef property of Dataset.- Parameters:
experimenter- ExperimenterRef to set.datasetIndex- the Dataset index.
-
setDatasetID
Set the ID property of Dataset.- Parameters:
id- ID to set.datasetIndex- the Dataset index.
-
setDatasetImageRef
Set the ImageRef property of Dataset.- Parameters:
image- ImageRef to set.datasetIndex- the Dataset index.imageRefIndex- ImageRef index (unused).
-
setDatasetName
Set the Name property of Dataset.- Parameters:
name- Name to set.datasetIndex- the Dataset index.
-
setDetectorAmplificationGain
Set the AmplificationGain property of Detector.- Parameters:
amplificationGain- AmplificationGain to set.instrumentIndex- the Instrument index.detectorIndex- the Detector index.
-
setDetectorAnnotationRef
void setDetectorAnnotationRef(String annotation, int instrumentIndex, int detectorIndex, int annotationRefIndex) Set the AnnotationRef property of Detector.- Parameters:
annotation- AnnotationRef to set.instrumentIndex- the Instrument index.detectorIndex- the Detector index.annotationRefIndex- AnnotationRef index (unused).
-
setDetectorGain
Set the Gain property of Detector.- Parameters:
gain- Gain to set.instrumentIndex- the Instrument index.detectorIndex- the Detector index.
-
setDetectorID
Set the ID property of Detector.- Parameters:
id- ID to set.instrumentIndex- the Instrument index.detectorIndex- the Detector index.
-
setDetectorLotNumber
Set the LotNumber property of Detector.- Parameters:
lotNumber- LotNumber to set.instrumentIndex- the Instrument index.detectorIndex- the Detector index.
-
setDetectorManufacturer
Set the Manufacturer property of Detector.- Parameters:
manufacturer- Manufacturer to set.instrumentIndex- the Instrument index.detectorIndex- the Detector index.
-
setDetectorModel
Set the Model property of Detector.- Parameters:
model- Model to set.instrumentIndex- the Instrument index.detectorIndex- the Detector index.
-
setDetectorOffset
Set the Offset property of Detector.- Parameters:
offset- Offset to set.instrumentIndex- the Instrument index.detectorIndex- the Detector index.
-
setDetectorSerialNumber
Set the SerialNumber property of Detector.- Parameters:
serialNumber- SerialNumber to set.instrumentIndex- the Instrument index.detectorIndex- the Detector index.
-
setDetectorType
Set the Type property of Detector.- Parameters:
type- Type to set.instrumentIndex- the Instrument index.detectorIndex- the Detector index.
-
setDetectorVoltage
Set the Voltage property of Detector.- Parameters:
voltage- Voltage to set.instrumentIndex- the Instrument index.detectorIndex- the Detector index.
-
setDetectorZoom
Set the Zoom property of Detector.- Parameters:
zoom- Zoom to set.instrumentIndex- the Instrument index.detectorIndex- the Detector index.
-
setDetectorSettingsBinning
Set the Binning property of DetectorSettings.- Parameters:
binning- Binning to set.imageIndex- the Image index.channelIndex- the Channel index.
-
setDetectorSettingsGain
Set the Gain property of DetectorSettings.- Parameters:
gain- Gain to set.imageIndex- the Image index.channelIndex- the Channel index.
-
setDetectorSettingsID
Set the ID property of DetectorSettings.- Parameters:
id- ID to set.imageIndex- the Image index.channelIndex- the Channel index.
-
setDetectorSettingsIntegration
Set the Integration property of DetectorSettings.- Parameters:
integration- Integration to set.imageIndex- the Image index.channelIndex- the Channel index.
-
setDetectorSettingsOffset
Set the Offset property of DetectorSettings.- Parameters:
offset- Offset to set.imageIndex- the Image index.channelIndex- the Channel index.
-
setDetectorSettingsReadOutRate
Set the ReadOutRate property of DetectorSettings.- Parameters:
readOutRate- ReadOutRate to set.imageIndex- the Image index.channelIndex- the Channel index.
-
setDetectorSettingsVoltage
Set the Voltage property of DetectorSettings.- Parameters:
voltage- Voltage to set.imageIndex- the Image index.channelIndex- the Channel index.
-
setDetectorSettingsZoom
Set the Zoom property of DetectorSettings.- Parameters:
zoom- Zoom to set.imageIndex- the Image index.channelIndex- the Channel index.
-
setDichroicAnnotationRef
void setDichroicAnnotationRef(String annotation, int instrumentIndex, int dichroicIndex, int annotationRefIndex) Set the AnnotationRef property of Dichroic.- Parameters:
annotation- AnnotationRef to set.instrumentIndex- the Instrument index.dichroicIndex- the Dichroic index.annotationRefIndex- AnnotationRef index (unused).
-
setDichroicID
Set the ID property of Dichroic.- Parameters:
id- ID to set.instrumentIndex- the Instrument index.dichroicIndex- the Dichroic index.
-
setDichroicLotNumber
Set the LotNumber property of Dichroic.- Parameters:
lotNumber- LotNumber to set.instrumentIndex- the Instrument index.dichroicIndex- the Dichroic index.
-
setDichroicManufacturer
Set the Manufacturer property of Dichroic.- Parameters:
manufacturer- Manufacturer to set.instrumentIndex- the Instrument index.dichroicIndex- the Dichroic index.
-
setDichroicModel
Set the Model property of Dichroic.- Parameters:
model- Model to set.instrumentIndex- the Instrument index.dichroicIndex- the Dichroic index.
-
setDichroicSerialNumber
Set the SerialNumber property of Dichroic.- Parameters:
serialNumber- SerialNumber to set.instrumentIndex- the Instrument index.dichroicIndex- the Dichroic index.
-
setDoubleAnnotationAnnotationRef
void setDoubleAnnotationAnnotationRef(String annotation, int doubleAnnotationIndex, int annotationRefIndex) Set the AnnotationRef property of DoubleAnnotation.- Parameters:
annotation- AnnotationRef to set.doubleAnnotationIndex- the DoubleAnnotation index.annotationRefIndex- AnnotationRef index (unused).
-
setDoubleAnnotationAnnotator
Set the Annotator property of DoubleAnnotation.- Parameters:
annotator- Annotator to set.doubleAnnotationIndex- the DoubleAnnotation index.
-
setDoubleAnnotationDescription
Set the Description property of DoubleAnnotation.- Parameters:
description- Description to set.doubleAnnotationIndex- the DoubleAnnotation index.
-
setDoubleAnnotationID
Set the ID property of DoubleAnnotation.- Parameters:
id- ID to set.doubleAnnotationIndex- the DoubleAnnotation index.
-
setDoubleAnnotationNamespace
Set the Namespace property of DoubleAnnotation.- Parameters:
namespace- Namespace to set.doubleAnnotationIndex- the DoubleAnnotation index.
-
setDoubleAnnotationValue
Set the Value property of DoubleAnnotation.- Parameters:
value- Value to set.doubleAnnotationIndex- the DoubleAnnotation index.
-
setEllipseAnnotationRef
void setEllipseAnnotationRef(String annotation, int ROIIndex, int shapeIndex, int annotationRefIndex) Set the AnnotationRef property of Ellipse.- Parameters:
annotation- AnnotationRef to set.ROIIndex- the ROI index.shapeIndex- the Shape index.annotationRefIndex- AnnotationRef index (unused).
-
setEllipseFillColor
Set the FillColor property of Ellipse.- Parameters:
fillColor- FillColor to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setEllipseFillRule
Set the FillRule property of Ellipse.- Parameters:
fillRule- FillRule to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setEllipseFontFamily
Set the FontFamily property of Ellipse.- Parameters:
fontFamily- FontFamily to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setEllipseFontSize
Set the FontSize property of Ellipse.- Parameters:
fontSize- FontSize to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setEllipseFontStyle
Set the FontStyle property of Ellipse.- Parameters:
fontStyle- FontStyle to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setEllipseID
Set the ID property of Ellipse.- Parameters:
id- ID to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setEllipseLocked
Set the Locked property of Ellipse.- Parameters:
locked- Locked to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setEllipseRadiusX
Set the RadiusX property of Ellipse.- Parameters:
radiusX- RadiusX to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setEllipseRadiusY
Set the RadiusY property of Ellipse.- Parameters:
radiusY- RadiusY to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setEllipseStrokeColor
Set the StrokeColor property of Ellipse.- Parameters:
strokeColor- StrokeColor to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setEllipseStrokeDashArray
Set the StrokeDashArray property of Ellipse.- Parameters:
strokeDashArray- StrokeDashArray to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setEllipseStrokeWidth
Set the StrokeWidth property of Ellipse.- Parameters:
strokeWidth- StrokeWidth to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setEllipseText
Set the Text property of Ellipse.- Parameters:
text- Text to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setEllipseTheC
Set the TheC property of Ellipse.- Parameters:
theC- TheC to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setEllipseTheT
Set the TheT property of Ellipse.- Parameters:
theT- TheT to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setEllipseTheZ
Set the TheZ property of Ellipse.- Parameters:
theZ- TheZ to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setEllipseTransform
Set the Transform property of Ellipse.- Parameters:
transform- Transform to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setEllipseX
Set the X property of Ellipse.- Parameters:
x- X to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setEllipseY
Set the Y property of Ellipse.- Parameters:
y- Y to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setExperimentDescription
Set the Description property of Experiment.- Parameters:
description- Description to set.experimentIndex- the Experiment index.
-
setExperimentExperimenterRef
Set the ExperimenterRef property of Experiment.- Parameters:
experimenter- ExperimenterRef to set.experimentIndex- the Experiment index.
-
setExperimentID
Set the ID property of Experiment.- Parameters:
id- ID to set.experimentIndex- the Experiment index.
-
setExperimentType
Set the Type property of Experiment.- Parameters:
type- Type to set.experimentIndex- the Experiment index.
-
setExperimenterAnnotationRef
Set the AnnotationRef property of Experimenter.- Parameters:
annotation- AnnotationRef to set.experimenterIndex- the Experimenter index.annotationRefIndex- AnnotationRef index (unused).
-
setExperimenterEmail
Set the Email property of Experimenter.- Parameters:
email- Email to set.experimenterIndex- the Experimenter index.
-
setExperimenterFirstName
Set the FirstName property of Experimenter.- Parameters:
firstName- FirstName to set.experimenterIndex- the Experimenter index.
-
setExperimenterID
Set the ID property of Experimenter.- Parameters:
id- ID to set.experimenterIndex- the Experimenter index.
-
setExperimenterInstitution
Set the Institution property of Experimenter.- Parameters:
institution- Institution to set.experimenterIndex- the Experimenter index.
-
setExperimenterLastName
Set the LastName property of Experimenter.- Parameters:
lastName- LastName to set.experimenterIndex- the Experimenter index.
-
setExperimenterMiddleName
Set the MiddleName property of Experimenter.- Parameters:
middleName- MiddleName to set.experimenterIndex- the Experimenter index.
-
setExperimenterUserName
Set the UserName property of Experimenter.- Parameters:
userName- UserName to set.experimenterIndex- the Experimenter index.
-
setExperimenterGroupAnnotationRef
void setExperimenterGroupAnnotationRef(String annotation, int experimenterGroupIndex, int annotationRefIndex) Set the AnnotationRef property of ExperimenterGroup.- Parameters:
annotation- AnnotationRef to set.experimenterGroupIndex- the ExperimenterGroup index.annotationRefIndex- AnnotationRef index (unused).
-
setExperimenterGroupDescription
Set the Description property of ExperimenterGroup.- Parameters:
description- Description to set.experimenterGroupIndex- the ExperimenterGroup index.
-
setExperimenterGroupExperimenterRef
void setExperimenterGroupExperimenterRef(String experimenter, int experimenterGroupIndex, int experimenterRefIndex) Set the ExperimenterRef property of ExperimenterGroup.- Parameters:
experimenter- ExperimenterRef to set.experimenterGroupIndex- the ExperimenterGroup index.experimenterRefIndex- ExperimenterRef index (unused).
-
setExperimenterGroupID
Set the ID property of ExperimenterGroup.- Parameters:
id- ID to set.experimenterGroupIndex- the ExperimenterGroup index.
-
setExperimenterGroupLeader
Set the Leader property of ExperimenterGroup.- Parameters:
leader- Leader to set.experimenterGroupIndex- the ExperimenterGroup index.leaderIndex- Leader index (unused).
-
setExperimenterGroupName
Set the Name property of ExperimenterGroup.- Parameters:
name- Name to set.experimenterGroupIndex- the ExperimenterGroup index.
-
setFilamentAnnotationRef
void setFilamentAnnotationRef(String annotation, int instrumentIndex, int lightSourceIndex, int annotationRefIndex) Set the AnnotationRef property of Filament.- Parameters:
annotation- AnnotationRef to set.instrumentIndex- the Instrument index.lightSourceIndex- the LightSource index.annotationRefIndex- AnnotationRef index (unused).
-
setFilamentID
Set the ID property of Filament.- Parameters:
id- ID to set.instrumentIndex- the Instrument index.lightSourceIndex- the LightSource index.
-
setFilamentLotNumber
Set the LotNumber property of Filament.- Parameters:
lotNumber- LotNumber to set.instrumentIndex- the Instrument index.lightSourceIndex- the LightSource index.
-
setFilamentManufacturer
Set the Manufacturer property of Filament.- Parameters:
manufacturer- Manufacturer to set.instrumentIndex- the Instrument index.lightSourceIndex- the LightSource index.
-
setFilamentModel
Set the Model property of Filament.- Parameters:
model- Model to set.instrumentIndex- the Instrument index.lightSourceIndex- the LightSource index.
-
setFilamentPower
Set the Power property of Filament.- Parameters:
power- Power to set.instrumentIndex- the Instrument index.lightSourceIndex- the LightSource index.
-
setFilamentSerialNumber
Set the SerialNumber property of Filament.- Parameters:
serialNumber- SerialNumber to set.instrumentIndex- the Instrument index.lightSourceIndex- the LightSource index.
-
setFilamentType
Set the Type property of Filament.- Parameters:
type- Type to set.instrumentIndex- the Instrument index.lightSourceIndex- the LightSource index.
-
setFileAnnotationAnnotationRef
void setFileAnnotationAnnotationRef(String annotation, int fileAnnotationIndex, int annotationRefIndex) Set the AnnotationRef property of FileAnnotation.- Parameters:
annotation- AnnotationRef to set.fileAnnotationIndex- the FileAnnotation index.annotationRefIndex- AnnotationRef index (unused).
-
setFileAnnotationAnnotator
Set the Annotator property of FileAnnotation.- Parameters:
annotator- Annotator to set.fileAnnotationIndex- the FileAnnotation index.
-
setFileAnnotationDescription
Set the Description property of FileAnnotation.- Parameters:
description- Description to set.fileAnnotationIndex- the FileAnnotation index.
-
setFileAnnotationID
Set the ID property of FileAnnotation.- Parameters:
id- ID to set.fileAnnotationIndex- the FileAnnotation index.
-
setFileAnnotationNamespace
Set the Namespace property of FileAnnotation.- Parameters:
namespace- Namespace to set.fileAnnotationIndex- the FileAnnotation index.
-
setFilterAnnotationRef
void setFilterAnnotationRef(String annotation, int instrumentIndex, int filterIndex, int annotationRefIndex) Set the AnnotationRef property of Filter.- Parameters:
annotation- AnnotationRef to set.instrumentIndex- the Instrument index.filterIndex- the Filter index.annotationRefIndex- AnnotationRef index (unused).
-
setFilterFilterWheel
Set the FilterWheel property of Filter.- Parameters:
filterWheel- FilterWheel to set.instrumentIndex- the Instrument index.filterIndex- the Filter index.
-
setFilterID
Set the ID property of Filter.- Parameters:
id- ID to set.instrumentIndex- the Instrument index.filterIndex- the Filter index.
-
setFilterLotNumber
Set the LotNumber property of Filter.- Parameters:
lotNumber- LotNumber to set.instrumentIndex- the Instrument index.filterIndex- the Filter index.
-
setFilterManufacturer
Set the Manufacturer property of Filter.- Parameters:
manufacturer- Manufacturer to set.instrumentIndex- the Instrument index.filterIndex- the Filter index.
-
setFilterModel
Set the Model property of Filter.- Parameters:
model- Model to set.instrumentIndex- the Instrument index.filterIndex- the Filter index.
-
setFilterSerialNumber
Set the SerialNumber property of Filter.- Parameters:
serialNumber- SerialNumber to set.instrumentIndex- the Instrument index.filterIndex- the Filter index.
-
setFilterType
Set the Type property of Filter.- Parameters:
type- Type to set.instrumentIndex- the Instrument index.filterIndex- the Filter index.
-
setFilterSetDichroicRef
Set the DichroicRef property of FilterSet.- Parameters:
dichroic- DichroicRef to set.instrumentIndex- the Instrument index.filterSetIndex- the FilterSet index.
-
setFilterSetEmissionFilterRef
void setFilterSetEmissionFilterRef(String emissionFilter, int instrumentIndex, int filterSetIndex, int emissionFilterRefIndex) Set the EmissionFilterRef property of FilterSet.- Parameters:
emissionFilter- EmissionFilterRef to set.instrumentIndex- the Instrument index.filterSetIndex- the FilterSet index.emissionFilterRefIndex- EmissionFilterRef index (unused).
-
setFilterSetExcitationFilterRef
void setFilterSetExcitationFilterRef(String excitationFilter, int instrumentIndex, int filterSetIndex, int excitationFilterRefIndex) Set the ExcitationFilterRef property of FilterSet.- Parameters:
excitationFilter- ExcitationFilterRef to set.instrumentIndex- the Instrument index.filterSetIndex- the FilterSet index.excitationFilterRefIndex- ExcitationFilterRef index (unused).
-
setFilterSetID
Set the ID property of FilterSet.- Parameters:
id- ID to set.instrumentIndex- the Instrument index.filterSetIndex- the FilterSet index.
-
setFilterSetLotNumber
Set the LotNumber property of FilterSet.- Parameters:
lotNumber- LotNumber to set.instrumentIndex- the Instrument index.filterSetIndex- the FilterSet index.
-
setFilterSetManufacturer
Set the Manufacturer property of FilterSet.- Parameters:
manufacturer- Manufacturer to set.instrumentIndex- the Instrument index.filterSetIndex- the FilterSet index.
-
setFilterSetModel
Set the Model property of FilterSet.- Parameters:
model- Model to set.instrumentIndex- the Instrument index.filterSetIndex- the FilterSet index.
-
setFilterSetSerialNumber
Set the SerialNumber property of FilterSet.- Parameters:
serialNumber- SerialNumber to set.instrumentIndex- the Instrument index.filterSetIndex- the FilterSet index.
-
setFolderAnnotationRef
Set the AnnotationRef property of Folder.- Parameters:
annotation- AnnotationRef to set.folderIndex- the Folder index.annotationRefIndex- AnnotationRef index (unused).
-
setFolderDescription
Set the Description property of Folder.- Parameters:
description- Description to set.folderIndex- the Folder index.
-
setFolderFolderRef
Set the FolderRef property of Folder.- Parameters:
folder- FolderRef to set.folderIndex- the Folder index.folderRefIndex- FolderRef index (unused).
-
setFolderID
Set the ID property of Folder.- Parameters:
id- ID to set.folderIndex- the Folder index.
-
setFolderImageRef
Set the ImageRef property of Folder.- Parameters:
image- ImageRef to set.folderIndex- the Folder index.imageRefIndex- ImageRef index (unused).
-
setFolderName
Set the Name property of Folder.- Parameters:
name- Name to set.folderIndex- the Folder index.
-
setFolderROIRef
Set the ROIRef property of Folder.- Parameters:
roi- ROIRef to set.folderIndex- the Folder index.ROIRefIndex- ROIRef index (unused).
-
setGenericExcitationSourceAnnotationRef
void setGenericExcitationSourceAnnotationRef(String annotation, int instrumentIndex, int lightSourceIndex, int annotationRefIndex) Set the AnnotationRef property of GenericExcitationSource.- Parameters:
annotation- AnnotationRef to set.instrumentIndex- the Instrument index.lightSourceIndex- the LightSource index.annotationRefIndex- AnnotationRef index (unused).
-
setGenericExcitationSourceID
Set the ID property of GenericExcitationSource.- Parameters:
id- ID to set.instrumentIndex- the Instrument index.lightSourceIndex- the LightSource index.
-
setGenericExcitationSourceLotNumber
void setGenericExcitationSourceLotNumber(String lotNumber, int instrumentIndex, int lightSourceIndex) Set the LotNumber property of GenericExcitationSource.- Parameters:
lotNumber- LotNumber to set.instrumentIndex- the Instrument index.lightSourceIndex- the LightSource index.
-
setGenericExcitationSourceManufacturer
void setGenericExcitationSourceManufacturer(String manufacturer, int instrumentIndex, int lightSourceIndex) Set the Manufacturer property of GenericExcitationSource.- Parameters:
manufacturer- Manufacturer to set.instrumentIndex- the Instrument index.lightSourceIndex- the LightSource index.
-
setGenericExcitationSourceModel
Set the Model property of GenericExcitationSource.- Parameters:
model- Model to set.instrumentIndex- the Instrument index.lightSourceIndex- the LightSource index.
-
setGenericExcitationSourcePower
Set the Power property of GenericExcitationSource.- Parameters:
power- Power to set.instrumentIndex- the Instrument index.lightSourceIndex- the LightSource index.
-
setGenericExcitationSourceSerialNumber
void setGenericExcitationSourceSerialNumber(String serialNumber, int instrumentIndex, int lightSourceIndex) Set the SerialNumber property of GenericExcitationSource.- Parameters:
serialNumber- SerialNumber to set.instrumentIndex- the Instrument index.lightSourceIndex- the LightSource index.
-
setImageAcquisitionDate
Set the AcquisitionDate property of Image.- Parameters:
acquisitionDate- AcquisitionDate to set.imageIndex- the Image index.
-
setImageAnnotationRef
Set the AnnotationRef property of Image.- Parameters:
annotation- AnnotationRef to set.imageIndex- the Image index.annotationRefIndex- AnnotationRef index (unused).
-
setImageDescription
Set the Description property of Image.- Parameters:
description- Description to set.imageIndex- the Image index.
-
setImageExperimentRef
Set the ExperimentRef property of Image.- Parameters:
experiment- ExperimentRef to set.imageIndex- the Image index.
-
setImageExperimenterGroupRef
Set the ExperimenterGroupRef property of Image.- Parameters:
experimenterGroup- ExperimenterGroupRef to set.imageIndex- the Image index.
-
setImageExperimenterRef
Set the ExperimenterRef property of Image.- Parameters:
experimenter- ExperimenterRef to set.imageIndex- the Image index.
-
setImageID
Set the ID property of Image.- Parameters:
id- ID to set.imageIndex- the Image index.
-
setImageInstrumentRef
Set the InstrumentRef property of Image.- Parameters:
instrument- InstrumentRef to set.imageIndex- the Image index.
-
setImageMicrobeamManipulationRef
void setImageMicrobeamManipulationRef(String microbeamManipulation, int imageIndex, int microbeamManipulationRefIndex) Set the MicrobeamManipulationRef property of Image.- Parameters:
microbeamManipulation- MicrobeamManipulationRef to set.imageIndex- the Image index.microbeamManipulationRefIndex- MicrobeamManipulationRef index (unused).
-
setImageName
Set the Name property of Image.- Parameters:
name- Name to set.imageIndex- the Image index.
-
setImageROIRef
Set the ROIRef property of Image.- Parameters:
roi- ROIRef to set.imageIndex- the Image index.ROIRefIndex- ROIRef index (unused).
-
setImagingEnvironmentAirPressure
Set the AirPressure property of ImagingEnvironment.- Parameters:
airPressure- AirPressure to set.imageIndex- the Image index.
-
setImagingEnvironmentCO2Percent
Set the CO2Percent property of ImagingEnvironment.- Parameters:
co2Percent- CO2Percent to set.imageIndex- the Image index.
-
setImagingEnvironmentHumidity
Set the Humidity property of ImagingEnvironment.- Parameters:
humidity- Humidity to set.imageIndex- the Image index.
-
setImagingEnvironmentTemperature
Set the Temperature property of ImagingEnvironment.- Parameters:
temperature- Temperature to set.imageIndex- the Image index.
-
setInstrumentAnnotationRef
Set the AnnotationRef property of Instrument.- Parameters:
annotation- AnnotationRef to set.instrumentIndex- the Instrument index.annotationRefIndex- AnnotationRef index (unused).
-
setInstrumentID
Set the ID property of Instrument.- Parameters:
id- ID to set.instrumentIndex- the Instrument index.
-
setLabelAnnotationRef
Set the AnnotationRef property of Label.- Parameters:
annotation- AnnotationRef to set.ROIIndex- the ROI index.shapeIndex- the Shape index.annotationRefIndex- AnnotationRef index (unused).
-
setLabelFillColor
Set the FillColor property of Label.- Parameters:
fillColor- FillColor to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setLabelFillRule
Set the FillRule property of Label.- Parameters:
fillRule- FillRule to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setLabelFontFamily
Set the FontFamily property of Label.- Parameters:
fontFamily- FontFamily to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setLabelFontSize
Set the FontSize property of Label.- Parameters:
fontSize- FontSize to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setLabelFontStyle
Set the FontStyle property of Label.- Parameters:
fontStyle- FontStyle to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setLabelID
Set the ID property of Label.- Parameters:
id- ID to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setLabelLocked
Set the Locked property of Label.- Parameters:
locked- Locked to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setLabelStrokeColor
Set the StrokeColor property of Label.- Parameters:
strokeColor- StrokeColor to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setLabelStrokeDashArray
Set the StrokeDashArray property of Label.- Parameters:
strokeDashArray- StrokeDashArray to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setLabelStrokeWidth
Set the StrokeWidth property of Label.- Parameters:
strokeWidth- StrokeWidth to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setLabelText
Set the Text property of Label.- Parameters:
text- Text to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setLabelTheC
Set the TheC property of Label.- Parameters:
theC- TheC to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setLabelTheT
Set the TheT property of Label.- Parameters:
theT- TheT to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setLabelTheZ
Set the TheZ property of Label.- Parameters:
theZ- TheZ to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setLabelTransform
Set the Transform property of Label.- Parameters:
transform- Transform to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setLabelX
Set the X property of Label.- Parameters:
x- X to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setLabelY
Set the Y property of Label.- Parameters:
y- Y to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setLaserAnnotationRef
void setLaserAnnotationRef(String annotation, int instrumentIndex, int lightSourceIndex, int annotationRefIndex) Set the AnnotationRef property of Laser.- Parameters:
annotation- AnnotationRef to set.instrumentIndex- the Instrument index.lightSourceIndex- the LightSource index.annotationRefIndex- AnnotationRef index (unused).
-
setLaserFrequencyMultiplication
void setLaserFrequencyMultiplication(PositiveInteger frequencyMultiplication, int instrumentIndex, int lightSourceIndex) Set the FrequencyMultiplication property of Laser.- Parameters:
frequencyMultiplication- FrequencyMultiplication to set.instrumentIndex- the Instrument index.lightSourceIndex- the LightSource index.
-
setLaserID
Set the ID property of Laser.- Parameters:
id- ID to set.instrumentIndex- the Instrument index.lightSourceIndex- the LightSource index.
-
setLaserLaserMedium
Set the LaserMedium property of Laser.- Parameters:
laserMedium- LaserMedium to set.instrumentIndex- the Instrument index.lightSourceIndex- the LightSource index.
-
setLaserLotNumber
Set the LotNumber property of Laser.- Parameters:
lotNumber- LotNumber to set.instrumentIndex- the Instrument index.lightSourceIndex- the LightSource index.
-
setLaserManufacturer
Set the Manufacturer property of Laser.- Parameters:
manufacturer- Manufacturer to set.instrumentIndex- the Instrument index.lightSourceIndex- the LightSource index.
-
setLaserModel
Set the Model property of Laser.- Parameters:
model- Model to set.instrumentIndex- the Instrument index.lightSourceIndex- the LightSource index.
-
setLaserPockelCell
Set the PockelCell property of Laser.- Parameters:
pockelCell- PockelCell to set.instrumentIndex- the Instrument index.lightSourceIndex- the LightSource index.
-
setLaserPower
Set the Power property of Laser.- Parameters:
power- Power to set.instrumentIndex- the Instrument index.lightSourceIndex- the LightSource index.
-
setLaserPulse
Set the Pulse property of Laser.- Parameters:
pulse- Pulse to set.instrumentIndex- the Instrument index.lightSourceIndex- the LightSource index.
-
setLaserPump
Set the Pump property of Laser.- Parameters:
pump- Pump to set.instrumentIndex- the Instrument index.lightSourceIndex- the LightSource index.
-
setLaserRepetitionRate
Set the RepetitionRate property of Laser.- Parameters:
repetitionRate- RepetitionRate to set.instrumentIndex- the Instrument index.lightSourceIndex- the LightSource index.
-
setLaserSerialNumber
Set the SerialNumber property of Laser.- Parameters:
serialNumber- SerialNumber to set.instrumentIndex- the Instrument index.lightSourceIndex- the LightSource index.
-
setLaserTuneable
Set the Tuneable property of Laser.- Parameters:
tuneable- Tuneable to set.instrumentIndex- the Instrument index.lightSourceIndex- the LightSource index.
-
setLaserType
Set the Type property of Laser.- Parameters:
type- Type to set.instrumentIndex- the Instrument index.lightSourceIndex- the LightSource index.
-
setLaserWavelength
Set the Wavelength property of Laser.- Parameters:
wavelength- Wavelength to set.instrumentIndex- the Instrument index.lightSourceIndex- the LightSource index.
-
setLightEmittingDiodeAnnotationRef
void setLightEmittingDiodeAnnotationRef(String annotation, int instrumentIndex, int lightSourceIndex, int annotationRefIndex) Set the AnnotationRef property of LightEmittingDiode.- Parameters:
annotation- AnnotationRef to set.instrumentIndex- the Instrument index.lightSourceIndex- the LightSource index.annotationRefIndex- AnnotationRef index (unused).
-
setLightEmittingDiodeID
Set the ID property of LightEmittingDiode.- Parameters:
id- ID to set.instrumentIndex- the Instrument index.lightSourceIndex- the LightSource index.
-
setLightEmittingDiodeLotNumber
Set the LotNumber property of LightEmittingDiode.- Parameters:
lotNumber- LotNumber to set.instrumentIndex- the Instrument index.lightSourceIndex- the LightSource index.
-
setLightEmittingDiodeManufacturer
void setLightEmittingDiodeManufacturer(String manufacturer, int instrumentIndex, int lightSourceIndex) Set the Manufacturer property of LightEmittingDiode.- Parameters:
manufacturer- Manufacturer to set.instrumentIndex- the Instrument index.lightSourceIndex- the LightSource index.
-
setLightEmittingDiodeModel
Set the Model property of LightEmittingDiode.- Parameters:
model- Model to set.instrumentIndex- the Instrument index.lightSourceIndex- the LightSource index.
-
setLightEmittingDiodePower
Set the Power property of LightEmittingDiode.- Parameters:
power- Power to set.instrumentIndex- the Instrument index.lightSourceIndex- the LightSource index.
-
setLightEmittingDiodeSerialNumber
void setLightEmittingDiodeSerialNumber(String serialNumber, int instrumentIndex, int lightSourceIndex) Set the SerialNumber property of LightEmittingDiode.- Parameters:
serialNumber- SerialNumber to set.instrumentIndex- the Instrument index.lightSourceIndex- the LightSource index.
-
setLightPathAnnotationRef
void setLightPathAnnotationRef(String annotation, int imageIndex, int channelIndex, int annotationRefIndex) Set the AnnotationRef property of LightPath.- Parameters:
annotation- AnnotationRef to set.imageIndex- the Image index.channelIndex- the Channel index.annotationRefIndex- AnnotationRef index (unused).
-
setLightPathDichroicRef
Set the DichroicRef property of LightPath.- Parameters:
dichroic- DichroicRef to set.imageIndex- the Image index.channelIndex- the Channel index.
-
setLightPathEmissionFilterRef
void setLightPathEmissionFilterRef(String emissionFilter, int imageIndex, int channelIndex, int emissionFilterRefIndex) Set the EmissionFilterRef property of LightPath.- Parameters:
emissionFilter- EmissionFilterRef to set.imageIndex- the Image index.channelIndex- the Channel index.emissionFilterRefIndex- EmissionFilterRef index (unused).
-
setLightPathExcitationFilterRef
void setLightPathExcitationFilterRef(String excitationFilter, int imageIndex, int channelIndex, int excitationFilterRefIndex) Set the ExcitationFilterRef property of LightPath.- Parameters:
excitationFilter- ExcitationFilterRef to set.imageIndex- the Image index.channelIndex- the Channel index.excitationFilterRefIndex- ExcitationFilterRef index (unused).
-
setChannelLightSourceSettingsAttenuation
void setChannelLightSourceSettingsAttenuation(PercentFraction attenuation, int imageIndex, int channelIndex) Set the Attenuation property of LightSourceSettings.- Parameters:
attenuation- Attenuation to set.imageIndex- the Image index.channelIndex- the Channel index.
-
setMicrobeamManipulationLightSourceSettingsAttenuation
void setMicrobeamManipulationLightSourceSettingsAttenuation(PercentFraction attenuation, int experimentIndex, int microbeamManipulationIndex, int lightSourceSettingsIndex) Set the Attenuation property of LightSourceSettings.- Parameters:
attenuation- Attenuation to set.experimentIndex- the Experiment index.microbeamManipulationIndex- the MicrobeamManipulation index.lightSourceSettingsIndex- the LightSourceSettings index.
-
setChannelLightSourceSettingsID
Set the ID property of LightSourceSettings.- Parameters:
id- ID to set.imageIndex- the Image index.channelIndex- the Channel index.
-
setMicrobeamManipulationLightSourceSettingsID
void setMicrobeamManipulationLightSourceSettingsID(String id, int experimentIndex, int microbeamManipulationIndex, int lightSourceSettingsIndex) Set the ID property of LightSourceSettings.- Parameters:
id- ID to set.experimentIndex- the Experiment index.microbeamManipulationIndex- the MicrobeamManipulation index.lightSourceSettingsIndex- the LightSourceSettings index.
-
setChannelLightSourceSettingsWavelength
Set the Wavelength property of LightSourceSettings.- Parameters:
wavelength- Wavelength to set.imageIndex- the Image index.channelIndex- the Channel index.
-
setMicrobeamManipulationLightSourceSettingsWavelength
void setMicrobeamManipulationLightSourceSettingsWavelength(Length wavelength, int experimentIndex, int microbeamManipulationIndex, int lightSourceSettingsIndex) Set the Wavelength property of LightSourceSettings.- Parameters:
wavelength- Wavelength to set.experimentIndex- the Experiment index.microbeamManipulationIndex- the MicrobeamManipulation index.lightSourceSettingsIndex- the LightSourceSettings index.
-
setLineAnnotationRef
Set the AnnotationRef property of Line.- Parameters:
annotation- AnnotationRef to set.ROIIndex- the ROI index.shapeIndex- the Shape index.annotationRefIndex- AnnotationRef index (unused).
-
setLineFillColor
Set the FillColor property of Line.- Parameters:
fillColor- FillColor to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setLineFillRule
Set the FillRule property of Line.- Parameters:
fillRule- FillRule to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setLineFontFamily
Set the FontFamily property of Line.- Parameters:
fontFamily- FontFamily to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setLineFontSize
Set the FontSize property of Line.- Parameters:
fontSize- FontSize to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setLineFontStyle
Set the FontStyle property of Line.- Parameters:
fontStyle- FontStyle to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setLineID
Set the ID property of Line.- Parameters:
id- ID to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setLineLocked
Set the Locked property of Line.- Parameters:
locked- Locked to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setLineMarkerEnd
Set the MarkerEnd property of Line.- Parameters:
markerEnd- MarkerEnd to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setLineMarkerStart
Set the MarkerStart property of Line.- Parameters:
markerStart- MarkerStart to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setLineStrokeColor
Set the StrokeColor property of Line.- Parameters:
strokeColor- StrokeColor to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setLineStrokeDashArray
Set the StrokeDashArray property of Line.- Parameters:
strokeDashArray- StrokeDashArray to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setLineStrokeWidth
Set the StrokeWidth property of Line.- Parameters:
strokeWidth- StrokeWidth to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setLineText
Set the Text property of Line.- Parameters:
text- Text to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setLineTheC
Set the TheC property of Line.- Parameters:
theC- TheC to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setLineTheT
Set the TheT property of Line.- Parameters:
theT- TheT to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setLineTheZ
Set the TheZ property of Line.- Parameters:
theZ- TheZ to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setLineTransform
Set the Transform property of Line.- Parameters:
transform- Transform to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setLineX1
Set the X1 property of Line.- Parameters:
x1- X1 to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setLineX2
Set the X2 property of Line.- Parameters:
x2- X2 to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setLineY1
Set the Y1 property of Line.- Parameters:
y1- Y1 to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setLineY2
Set the Y2 property of Line.- Parameters:
y2- Y2 to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setListAnnotationAnnotationRef
void setListAnnotationAnnotationRef(String annotation, int listAnnotationIndex, int annotationRefIndex) Set the AnnotationRef property of ListAnnotation.- Parameters:
annotation- AnnotationRef to set.listAnnotationIndex- the ListAnnotation index.annotationRefIndex- AnnotationRef index (unused).
-
setListAnnotationAnnotator
Set the Annotator property of ListAnnotation.- Parameters:
annotator- Annotator to set.listAnnotationIndex- the ListAnnotation index.
-
setListAnnotationDescription
Set the Description property of ListAnnotation.- Parameters:
description- Description to set.listAnnotationIndex- the ListAnnotation index.
-
setListAnnotationID
Set the ID property of ListAnnotation.- Parameters:
id- ID to set.listAnnotationIndex- the ListAnnotation index.
-
setListAnnotationNamespace
Set the Namespace property of ListAnnotation.- Parameters:
namespace- Namespace to set.listAnnotationIndex- the ListAnnotation index.
-
setLongAnnotationAnnotationRef
void setLongAnnotationAnnotationRef(String annotation, int longAnnotationIndex, int annotationRefIndex) Set the AnnotationRef property of LongAnnotation.- Parameters:
annotation- AnnotationRef to set.longAnnotationIndex- the LongAnnotation index.annotationRefIndex- AnnotationRef index (unused).
-
setLongAnnotationAnnotator
Set the Annotator property of LongAnnotation.- Parameters:
annotator- Annotator to set.longAnnotationIndex- the LongAnnotation index.
-
setLongAnnotationDescription
Set the Description property of LongAnnotation.- Parameters:
description- Description to set.longAnnotationIndex- the LongAnnotation index.
-
setLongAnnotationID
Set the ID property of LongAnnotation.- Parameters:
id- ID to set.longAnnotationIndex- the LongAnnotation index.
-
setLongAnnotationNamespace
Set the Namespace property of LongAnnotation.- Parameters:
namespace- Namespace to set.longAnnotationIndex- the LongAnnotation index.
-
setLongAnnotationValue
Set the Value property of LongAnnotation.- Parameters:
value- Value to set.longAnnotationIndex- the LongAnnotation index.
-
setMapAnnotationAnnotationRef
void setMapAnnotationAnnotationRef(String annotation, int mapAnnotationIndex, int annotationRefIndex) Set the AnnotationRef property of MapAnnotation.- Parameters:
annotation- AnnotationRef to set.mapAnnotationIndex- the MapAnnotation index.annotationRefIndex- AnnotationRef index (unused).
-
setMapAnnotationAnnotator
Set the Annotator property of MapAnnotation.- Parameters:
annotator- Annotator to set.mapAnnotationIndex- the MapAnnotation index.
-
setMapAnnotationDescription
Set the Description property of MapAnnotation.- Parameters:
description- Description to set.mapAnnotationIndex- the MapAnnotation index.
-
setMapAnnotationID
Set the ID property of MapAnnotation.- Parameters:
id- ID to set.mapAnnotationIndex- the MapAnnotation index.
-
setMapAnnotationNamespace
Set the Namespace property of MapAnnotation.- Parameters:
namespace- Namespace to set.mapAnnotationIndex- the MapAnnotation index.
-
setMaskAnnotationRef
Set the AnnotationRef property of Mask.- Parameters:
annotation- AnnotationRef to set.ROIIndex- the ROI index.shapeIndex- the Shape index.annotationRefIndex- AnnotationRef index (unused).
-
setMaskFillColor
Set the FillColor property of Mask.- Parameters:
fillColor- FillColor to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setMaskFillRule
Set the FillRule property of Mask.- Parameters:
fillRule- FillRule to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setMaskFontFamily
Set the FontFamily property of Mask.- Parameters:
fontFamily- FontFamily to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setMaskFontSize
Set the FontSize property of Mask.- Parameters:
fontSize- FontSize to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setMaskFontStyle
Set the FontStyle property of Mask.- Parameters:
fontStyle- FontStyle to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setMaskHeight
Set the Height property of Mask.- Parameters:
height- Height to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setMaskID
Set the ID property of Mask.- Parameters:
id- ID to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setMaskLocked
Set the Locked property of Mask.- Parameters:
locked- Locked to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setMaskStrokeColor
Set the StrokeColor property of Mask.- Parameters:
strokeColor- StrokeColor to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setMaskStrokeDashArray
Set the StrokeDashArray property of Mask.- Parameters:
strokeDashArray- StrokeDashArray to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setMaskStrokeWidth
Set the StrokeWidth property of Mask.- Parameters:
strokeWidth- StrokeWidth to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setMaskText
Set the Text property of Mask.- Parameters:
text- Text to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setMaskTheC
Set the TheC property of Mask.- Parameters:
theC- TheC to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setMaskTheT
Set the TheT property of Mask.- Parameters:
theT- TheT to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setMaskTheZ
Set the TheZ property of Mask.- Parameters:
theZ- TheZ to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setMaskTransform
Set the Transform property of Mask.- Parameters:
transform- Transform to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setMaskWidth
Set the Width property of Mask.- Parameters:
width- Width to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setMaskX
Set the X property of Mask.- Parameters:
x- X to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setMaskY
Set the Y property of Mask.- Parameters:
y- Y to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setMicrobeamManipulationDescription
void setMicrobeamManipulationDescription(String description, int experimentIndex, int microbeamManipulationIndex) Set the Description property of MicrobeamManipulation.- Parameters:
description- Description to set.experimentIndex- the Experiment index.microbeamManipulationIndex- the MicrobeamManipulation index.
-
setMicrobeamManipulationExperimenterRef
void setMicrobeamManipulationExperimenterRef(String experimenter, int experimentIndex, int microbeamManipulationIndex) Set the ExperimenterRef property of MicrobeamManipulation.- Parameters:
experimenter- ExperimenterRef to set.experimentIndex- the Experiment index.microbeamManipulationIndex- the MicrobeamManipulation index.
-
setMicrobeamManipulationID
Set the ID property of MicrobeamManipulation.- Parameters:
id- ID to set.experimentIndex- the Experiment index.microbeamManipulationIndex- the MicrobeamManipulation index.
-
setMicrobeamManipulationROIRef
void setMicrobeamManipulationROIRef(String roi, int experimentIndex, int microbeamManipulationIndex, int ROIRefIndex) Set the ROIRef property of MicrobeamManipulation.- Parameters:
roi- ROIRef to set.experimentIndex- the Experiment index.microbeamManipulationIndex- the MicrobeamManipulation index.ROIRefIndex- ROIRef index (unused).
-
setMicrobeamManipulationType
void setMicrobeamManipulationType(MicrobeamManipulationType type, int experimentIndex, int microbeamManipulationIndex) Set the Type property of MicrobeamManipulation.- Parameters:
type- Type to set.experimentIndex- the Experiment index.microbeamManipulationIndex- the MicrobeamManipulation index.
-
setMicroscopeLotNumber
Set the LotNumber property of Microscope.- Parameters:
lotNumber- LotNumber to set.instrumentIndex- the Instrument index.
-
setMicroscopeManufacturer
Set the Manufacturer property of Microscope.- Parameters:
manufacturer- Manufacturer to set.instrumentIndex- the Instrument index.
-
setMicroscopeModel
Set the Model property of Microscope.- Parameters:
model- Model to set.instrumentIndex- the Instrument index.
-
setMicroscopeSerialNumber
Set the SerialNumber property of Microscope.- Parameters:
serialNumber- SerialNumber to set.instrumentIndex- the Instrument index.
-
setMicroscopeType
Set the Type property of Microscope.- Parameters:
type- Type to set.instrumentIndex- the Instrument index.
-
setObjectiveAnnotationRef
void setObjectiveAnnotationRef(String annotation, int instrumentIndex, int objectiveIndex, int annotationRefIndex) Set the AnnotationRef property of Objective.- Parameters:
annotation- AnnotationRef to set.instrumentIndex- the Instrument index.objectiveIndex- the Objective index.annotationRefIndex- AnnotationRef index (unused).
-
setObjectiveCalibratedMagnification
void setObjectiveCalibratedMagnification(Double calibratedMagnification, int instrumentIndex, int objectiveIndex) Set the CalibratedMagnification property of Objective.- Parameters:
calibratedMagnification- CalibratedMagnification to set.instrumentIndex- the Instrument index.objectiveIndex- the Objective index.
-
setObjectiveCorrection
Set the Correction property of Objective.- Parameters:
correction- Correction to set.instrumentIndex- the Instrument index.objectiveIndex- the Objective index.
-
setObjectiveID
Set the ID property of Objective.- Parameters:
id- ID to set.instrumentIndex- the Instrument index.objectiveIndex- the Objective index.
-
setObjectiveImmersion
Set the Immersion property of Objective.- Parameters:
immersion- Immersion to set.instrumentIndex- the Instrument index.objectiveIndex- the Objective index.
-
setObjectiveIris
Set the Iris property of Objective.- Parameters:
iris- Iris to set.instrumentIndex- the Instrument index.objectiveIndex- the Objective index.
-
setObjectiveLensNA
Set the LensNA property of Objective.- Parameters:
lensNA- LensNA to set.instrumentIndex- the Instrument index.objectiveIndex- the Objective index.
-
setObjectiveLotNumber
Set the LotNumber property of Objective.- Parameters:
lotNumber- LotNumber to set.instrumentIndex- the Instrument index.objectiveIndex- the Objective index.
-
setObjectiveManufacturer
Set the Manufacturer property of Objective.- Parameters:
manufacturer- Manufacturer to set.instrumentIndex- the Instrument index.objectiveIndex- the Objective index.
-
setObjectiveModel
Set the Model property of Objective.- Parameters:
model- Model to set.instrumentIndex- the Instrument index.objectiveIndex- the Objective index.
-
setObjectiveNominalMagnification
void setObjectiveNominalMagnification(Double nominalMagnification, int instrumentIndex, int objectiveIndex) Set the NominalMagnification property of Objective.- Parameters:
nominalMagnification- NominalMagnification to set.instrumentIndex- the Instrument index.objectiveIndex- the Objective index.
-
setObjectiveSerialNumber
Set the SerialNumber property of Objective.- Parameters:
serialNumber- SerialNumber to set.instrumentIndex- the Instrument index.objectiveIndex- the Objective index.
-
setObjectiveWorkingDistance
Set the WorkingDistance property of Objective.- Parameters:
workingDistance- WorkingDistance to set.instrumentIndex- the Instrument index.objectiveIndex- the Objective index.
-
setObjectiveSettingsCorrectionCollar
Set the CorrectionCollar property of ObjectiveSettings.- Parameters:
correctionCollar- CorrectionCollar to set.imageIndex- the Image index.
-
setObjectiveSettingsID
Set the ID property of ObjectiveSettings.- Parameters:
id- ID to set.imageIndex- the Image index.
-
setObjectiveSettingsMedium
Set the Medium property of ObjectiveSettings.- Parameters:
medium- Medium to set.imageIndex- the Image index.
-
setObjectiveSettingsRefractiveIndex
Set the RefractiveIndex property of ObjectiveSettings.- Parameters:
refractiveIndex- RefractiveIndex to set.imageIndex- the Image index.
-
setPixelsBigEndian
Set the BigEndian property of Pixels.- Parameters:
bigEndian- BigEndian to set.imageIndex- the Image index.
-
setPixelsDimensionOrder
Set the DimensionOrder property of Pixels.- Parameters:
dimensionOrder- DimensionOrder to set.imageIndex- the Image index.
-
setPixelsID
Set the ID property of Pixels.- Parameters:
id- ID to set.imageIndex- the Image index.
-
setPixelsInterleaved
Set the Interleaved property of Pixels.- Parameters:
interleaved- Interleaved to set.imageIndex- the Image index.
-
setPixelsPhysicalSizeX
Set the PhysicalSizeX property of Pixels.- Parameters:
physicalSizeX- PhysicalSizeX to set.imageIndex- the Image index.
-
setPixelsPhysicalSizeY
Set the PhysicalSizeY property of Pixels.- Parameters:
physicalSizeY- PhysicalSizeY to set.imageIndex- the Image index.
-
setPixelsPhysicalSizeZ
Set the PhysicalSizeZ property of Pixels.- Parameters:
physicalSizeZ- PhysicalSizeZ to set.imageIndex- the Image index.
-
setPixelsSignificantBits
Set the SignificantBits property of Pixels.- Parameters:
significantBits- SignificantBits to set.imageIndex- the Image index.
-
setPixelsSizeC
Set the SizeC property of Pixels.- Parameters:
sizeC- SizeC to set.imageIndex- the Image index.
-
setPixelsSizeT
Set the SizeT property of Pixels.- Parameters:
sizeT- SizeT to set.imageIndex- the Image index.
-
setPixelsSizeX
Set the SizeX property of Pixels.- Parameters:
sizeX- SizeX to set.imageIndex- the Image index.
-
setPixelsSizeY
Set the SizeY property of Pixels.- Parameters:
sizeY- SizeY to set.imageIndex- the Image index.
-
setPixelsSizeZ
Set the SizeZ property of Pixels.- Parameters:
sizeZ- SizeZ to set.imageIndex- the Image index.
-
setPixelsTimeIncrement
Set the TimeIncrement property of Pixels.- Parameters:
timeIncrement- TimeIncrement to set.imageIndex- the Image index.
-
setPixelsType
Set the Type property of Pixels.- Parameters:
type- Type to set.imageIndex- the Image index.
-
setPlaneAnnotationRef
void setPlaneAnnotationRef(String annotation, int imageIndex, int planeIndex, int annotationRefIndex) Set the AnnotationRef property of Plane.- Parameters:
annotation- AnnotationRef to set.imageIndex- the Image index.planeIndex- the Plane index.annotationRefIndex- AnnotationRef index (unused).
-
setPlaneDeltaT
Set the DeltaT property of Plane.- Parameters:
deltaT- DeltaT to set.imageIndex- the Image index.planeIndex- the Plane index.
-
setPlaneExposureTime
Set the ExposureTime property of Plane.- Parameters:
exposureTime- ExposureTime to set.imageIndex- the Image index.planeIndex- the Plane index.
-
setPlaneHashSHA1
Set the HashSHA1 property of Plane.- Parameters:
hashSHA1- HashSHA1 to set.imageIndex- the Image index.planeIndex- the Plane index.
-
setPlanePositionX
Set the PositionX property of Plane.- Parameters:
positionX- PositionX to set.imageIndex- the Image index.planeIndex- the Plane index.
-
setPlanePositionY
Set the PositionY property of Plane.- Parameters:
positionY- PositionY to set.imageIndex- the Image index.planeIndex- the Plane index.
-
setPlanePositionZ
Set the PositionZ property of Plane.- Parameters:
positionZ- PositionZ to set.imageIndex- the Image index.planeIndex- the Plane index.
-
setPlaneTheC
Set the TheC property of Plane.- Parameters:
theC- TheC to set.imageIndex- the Image index.planeIndex- the Plane index.
-
setPlaneTheT
Set the TheT property of Plane.- Parameters:
theT- TheT to set.imageIndex- the Image index.planeIndex- the Plane index.
-
setPlaneTheZ
Set the TheZ property of Plane.- Parameters:
theZ- TheZ to set.imageIndex- the Image index.planeIndex- the Plane index.
-
setPlateAnnotationRef
Set the AnnotationRef property of Plate.- Parameters:
annotation- AnnotationRef to set.plateIndex- the Plate index.annotationRefIndex- AnnotationRef index (unused).
-
setPlateColumnNamingConvention
Set the ColumnNamingConvention property of Plate.- Parameters:
columnNamingConvention- ColumnNamingConvention to set.plateIndex- the Plate index.
-
setPlateColumns
Set the Columns property of Plate.- Parameters:
columns- Columns to set.plateIndex- the Plate index.
-
setPlateDescription
Set the Description property of Plate.- Parameters:
description- Description to set.plateIndex- the Plate index.
-
setPlateExternalIdentifier
Set the ExternalIdentifier property of Plate.- Parameters:
externalIdentifier- ExternalIdentifier to set.plateIndex- the Plate index.
-
setPlateFieldIndex
Set the FieldIndex property of Plate.- Parameters:
fieldIndex- FieldIndex to set.plateIndex- the Plate index.
-
setPlateID
Set the ID property of Plate.- Parameters:
id- ID to set.plateIndex- the Plate index.
-
setPlateName
Set the Name property of Plate.- Parameters:
name- Name to set.plateIndex- the Plate index.
-
setPlateRowNamingConvention
Set the RowNamingConvention property of Plate.- Parameters:
rowNamingConvention- RowNamingConvention to set.plateIndex- the Plate index.
-
setPlateRows
Set the Rows property of Plate.- Parameters:
rows- Rows to set.plateIndex- the Plate index.
-
setPlateStatus
Set the Status property of Plate.- Parameters:
status- Status to set.plateIndex- the Plate index.
-
setPlateWellOriginX
Set the WellOriginX property of Plate.- Parameters:
wellOriginX- WellOriginX to set.plateIndex- the Plate index.
-
setPlateWellOriginY
Set the WellOriginY property of Plate.- Parameters:
wellOriginY- WellOriginY to set.plateIndex- the Plate index.
-
setPlateAcquisitionAnnotationRef
void setPlateAcquisitionAnnotationRef(String annotation, int plateIndex, int plateAcquisitionIndex, int annotationRefIndex) Set the AnnotationRef property of PlateAcquisition.- Parameters:
annotation- AnnotationRef to set.plateIndex- the Plate index.plateAcquisitionIndex- the PlateAcquisition index.annotationRefIndex- AnnotationRef index (unused).
-
setPlateAcquisitionDescription
Set the Description property of PlateAcquisition.- Parameters:
description- Description to set.plateIndex- the Plate index.plateAcquisitionIndex- the PlateAcquisition index.
-
setPlateAcquisitionEndTime
Set the EndTime property of PlateAcquisition.- Parameters:
endTime- EndTime to set.plateIndex- the Plate index.plateAcquisitionIndex- the PlateAcquisition index.
-
setPlateAcquisitionID
Set the ID property of PlateAcquisition.- Parameters:
id- ID to set.plateIndex- the Plate index.plateAcquisitionIndex- the PlateAcquisition index.
-
setPlateAcquisitionMaximumFieldCount
void setPlateAcquisitionMaximumFieldCount(PositiveInteger maximumFieldCount, int plateIndex, int plateAcquisitionIndex) Set the MaximumFieldCount property of PlateAcquisition.- Parameters:
maximumFieldCount- MaximumFieldCount to set.plateIndex- the Plate index.plateAcquisitionIndex- the PlateAcquisition index.
-
setPlateAcquisitionName
Set the Name property of PlateAcquisition.- Parameters:
name- Name to set.plateIndex- the Plate index.plateAcquisitionIndex- the PlateAcquisition index.
-
setPlateAcquisitionStartTime
Set the StartTime property of PlateAcquisition.- Parameters:
startTime- StartTime to set.plateIndex- the Plate index.plateAcquisitionIndex- the PlateAcquisition index.
-
setPlateAcquisitionWellSampleRef
void setPlateAcquisitionWellSampleRef(String wellSample, int plateIndex, int plateAcquisitionIndex, int wellSampleRefIndex) Set the WellSampleRef property of PlateAcquisition.- Parameters:
wellSample- WellSampleRef to set.plateIndex- the Plate index.plateAcquisitionIndex- the PlateAcquisition index.wellSampleRefIndex- WellSampleRef index (unused).
-
setPointAnnotationRef
Set the AnnotationRef property of Point.- Parameters:
annotation- AnnotationRef to set.ROIIndex- the ROI index.shapeIndex- the Shape index.annotationRefIndex- AnnotationRef index (unused).
-
setPointFillColor
Set the FillColor property of Point.- Parameters:
fillColor- FillColor to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPointFillRule
Set the FillRule property of Point.- Parameters:
fillRule- FillRule to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPointFontFamily
Set the FontFamily property of Point.- Parameters:
fontFamily- FontFamily to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPointFontSize
Set the FontSize property of Point.- Parameters:
fontSize- FontSize to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPointFontStyle
Set the FontStyle property of Point.- Parameters:
fontStyle- FontStyle to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPointID
Set the ID property of Point.- Parameters:
id- ID to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPointLocked
Set the Locked property of Point.- Parameters:
locked- Locked to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPointStrokeColor
Set the StrokeColor property of Point.- Parameters:
strokeColor- StrokeColor to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPointStrokeDashArray
Set the StrokeDashArray property of Point.- Parameters:
strokeDashArray- StrokeDashArray to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPointStrokeWidth
Set the StrokeWidth property of Point.- Parameters:
strokeWidth- StrokeWidth to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPointText
Set the Text property of Point.- Parameters:
text- Text to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPointTheC
Set the TheC property of Point.- Parameters:
theC- TheC to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPointTheT
Set the TheT property of Point.- Parameters:
theT- TheT to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPointTheZ
Set the TheZ property of Point.- Parameters:
theZ- TheZ to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPointTransform
Set the Transform property of Point.- Parameters:
transform- Transform to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPointX
Set the X property of Point.- Parameters:
x- X to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPointY
Set the Y property of Point.- Parameters:
y- Y to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPolygonAnnotationRef
void setPolygonAnnotationRef(String annotation, int ROIIndex, int shapeIndex, int annotationRefIndex) Set the AnnotationRef property of Polygon.- Parameters:
annotation- AnnotationRef to set.ROIIndex- the ROI index.shapeIndex- the Shape index.annotationRefIndex- AnnotationRef index (unused).
-
setPolygonFillColor
Set the FillColor property of Polygon.- Parameters:
fillColor- FillColor to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPolygonFillRule
Set the FillRule property of Polygon.- Parameters:
fillRule- FillRule to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPolygonFontFamily
Set the FontFamily property of Polygon.- Parameters:
fontFamily- FontFamily to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPolygonFontSize
Set the FontSize property of Polygon.- Parameters:
fontSize- FontSize to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPolygonFontStyle
Set the FontStyle property of Polygon.- Parameters:
fontStyle- FontStyle to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPolygonID
Set the ID property of Polygon.- Parameters:
id- ID to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPolygonLocked
Set the Locked property of Polygon.- Parameters:
locked- Locked to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPolygonPoints
Set the Points property of Polygon.- Parameters:
points- Points to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPolygonStrokeColor
Set the StrokeColor property of Polygon.- Parameters:
strokeColor- StrokeColor to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPolygonStrokeDashArray
Set the StrokeDashArray property of Polygon.- Parameters:
strokeDashArray- StrokeDashArray to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPolygonStrokeWidth
Set the StrokeWidth property of Polygon.- Parameters:
strokeWidth- StrokeWidth to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPolygonText
Set the Text property of Polygon.- Parameters:
text- Text to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPolygonTheC
Set the TheC property of Polygon.- Parameters:
theC- TheC to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPolygonTheT
Set the TheT property of Polygon.- Parameters:
theT- TheT to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPolygonTheZ
Set the TheZ property of Polygon.- Parameters:
theZ- TheZ to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPolygonTransform
Set the Transform property of Polygon.- Parameters:
transform- Transform to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPolylineAnnotationRef
void setPolylineAnnotationRef(String annotation, int ROIIndex, int shapeIndex, int annotationRefIndex) Set the AnnotationRef property of Polyline.- Parameters:
annotation- AnnotationRef to set.ROIIndex- the ROI index.shapeIndex- the Shape index.annotationRefIndex- AnnotationRef index (unused).
-
setPolylineFillColor
Set the FillColor property of Polyline.- Parameters:
fillColor- FillColor to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPolylineFillRule
Set the FillRule property of Polyline.- Parameters:
fillRule- FillRule to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPolylineFontFamily
Set the FontFamily property of Polyline.- Parameters:
fontFamily- FontFamily to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPolylineFontSize
Set the FontSize property of Polyline.- Parameters:
fontSize- FontSize to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPolylineFontStyle
Set the FontStyle property of Polyline.- Parameters:
fontStyle- FontStyle to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPolylineID
Set the ID property of Polyline.- Parameters:
id- ID to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPolylineLocked
Set the Locked property of Polyline.- Parameters:
locked- Locked to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPolylineMarkerEnd
Set the MarkerEnd property of Polyline.- Parameters:
markerEnd- MarkerEnd to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPolylineMarkerStart
Set the MarkerStart property of Polyline.- Parameters:
markerStart- MarkerStart to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPolylinePoints
Set the Points property of Polyline.- Parameters:
points- Points to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPolylineStrokeColor
Set the StrokeColor property of Polyline.- Parameters:
strokeColor- StrokeColor to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPolylineStrokeDashArray
Set the StrokeDashArray property of Polyline.- Parameters:
strokeDashArray- StrokeDashArray to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPolylineStrokeWidth
Set the StrokeWidth property of Polyline.- Parameters:
strokeWidth- StrokeWidth to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPolylineText
Set the Text property of Polyline.- Parameters:
text- Text to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPolylineTheC
Set the TheC property of Polyline.- Parameters:
theC- TheC to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPolylineTheT
Set the TheT property of Polyline.- Parameters:
theT- TheT to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPolylineTheZ
Set the TheZ property of Polyline.- Parameters:
theZ- TheZ to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setPolylineTransform
Set the Transform property of Polyline.- Parameters:
transform- Transform to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setProjectAnnotationRef
Set the AnnotationRef property of Project.- Parameters:
annotation- AnnotationRef to set.projectIndex- the Project index.annotationRefIndex- AnnotationRef index (unused).
-
setProjectDatasetRef
Set the DatasetRef property of Project.- Parameters:
dataset- DatasetRef to set.projectIndex- the Project index.datasetRefIndex- DatasetRef index (unused).
-
setProjectDescription
Set the Description property of Project.- Parameters:
description- Description to set.projectIndex- the Project index.
-
setProjectExperimenterGroupRef
Set the ExperimenterGroupRef property of Project.- Parameters:
experimenterGroup- ExperimenterGroupRef to set.projectIndex- the Project index.
-
setProjectExperimenterRef
Set the ExperimenterRef property of Project.- Parameters:
experimenter- ExperimenterRef to set.projectIndex- the Project index.
-
setProjectID
Set the ID property of Project.- Parameters:
id- ID to set.projectIndex- the Project index.
-
setProjectName
Set the Name property of Project.- Parameters:
name- Name to set.projectIndex- the Project index.
-
setROIAnnotationRef
Set the AnnotationRef property of ROI.- Parameters:
annotation- AnnotationRef to set.ROIIndex- the ROI index.annotationRefIndex- AnnotationRef index (unused).
-
setROIDescription
Set the Description property of ROI.- Parameters:
description- Description to set.ROIIndex- the ROI index.
-
setROIID
Set the ID property of ROI.- Parameters:
id- ID to set.ROIIndex- the ROI index.
-
setROIName
Set the Name property of ROI.- Parameters:
name- Name to set.ROIIndex- the ROI index.
-
setReagentAnnotationRef
void setReagentAnnotationRef(String annotation, int screenIndex, int reagentIndex, int annotationRefIndex) Set the AnnotationRef property of Reagent.- Parameters:
annotation- AnnotationRef to set.screenIndex- the Screen index.reagentIndex- the Reagent index.annotationRefIndex- AnnotationRef index (unused).
-
setReagentDescription
Set the Description property of Reagent.- Parameters:
description- Description to set.screenIndex- the Screen index.reagentIndex- the Reagent index.
-
setReagentID
Set the ID property of Reagent.- Parameters:
id- ID to set.screenIndex- the Screen index.reagentIndex- the Reagent index.
-
setReagentName
Set the Name property of Reagent.- Parameters:
name- Name to set.screenIndex- the Screen index.reagentIndex- the Reagent index.
-
setReagentReagentIdentifier
Set the ReagentIdentifier property of Reagent.- Parameters:
reagentIdentifier- ReagentIdentifier to set.screenIndex- the Screen index.reagentIndex- the Reagent index.
-
setRectangleAnnotationRef
void setRectangleAnnotationRef(String annotation, int ROIIndex, int shapeIndex, int annotationRefIndex) Set the AnnotationRef property of Rectangle.- Parameters:
annotation- AnnotationRef to set.ROIIndex- the ROI index.shapeIndex- the Shape index.annotationRefIndex- AnnotationRef index (unused).
-
setRectangleFillColor
Set the FillColor property of Rectangle.- Parameters:
fillColor- FillColor to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setRectangleFillRule
Set the FillRule property of Rectangle.- Parameters:
fillRule- FillRule to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setRectangleFontFamily
Set the FontFamily property of Rectangle.- Parameters:
fontFamily- FontFamily to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setRectangleFontSize
Set the FontSize property of Rectangle.- Parameters:
fontSize- FontSize to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setRectangleFontStyle
Set the FontStyle property of Rectangle.- Parameters:
fontStyle- FontStyle to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setRectangleHeight
Set the Height property of Rectangle.- Parameters:
height- Height to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setRectangleID
Set the ID property of Rectangle.- Parameters:
id- ID to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setRectangleLocked
Set the Locked property of Rectangle.- Parameters:
locked- Locked to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setRectangleStrokeColor
Set the StrokeColor property of Rectangle.- Parameters:
strokeColor- StrokeColor to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setRectangleStrokeDashArray
Set the StrokeDashArray property of Rectangle.- Parameters:
strokeDashArray- StrokeDashArray to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setRectangleStrokeWidth
Set the StrokeWidth property of Rectangle.- Parameters:
strokeWidth- StrokeWidth to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setRectangleText
Set the Text property of Rectangle.- Parameters:
text- Text to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setRectangleTheC
Set the TheC property of Rectangle.- Parameters:
theC- TheC to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setRectangleTheT
Set the TheT property of Rectangle.- Parameters:
theT- TheT to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setRectangleTheZ
Set the TheZ property of Rectangle.- Parameters:
theZ- TheZ to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setRectangleTransform
Set the Transform property of Rectangle.- Parameters:
transform- Transform to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setRectangleWidth
Set the Width property of Rectangle.- Parameters:
width- Width to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setRectangleX
Set the X property of Rectangle.- Parameters:
x- X to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setRectangleY
Set the Y property of Rectangle.- Parameters:
y- Y to set.ROIIndex- the ROI index.shapeIndex- the Shape index.
-
setRightsRightsHeld
Set the RightsHeld property of Rights.- Parameters:
rightsHeld- RightsHeld to set.
-
setRightsRightsHolder
Set the RightsHolder property of Rights.- Parameters:
rightsHolder- RightsHolder to set.
-
setScreenAnnotationRef
Set the AnnotationRef property of Screen.- Parameters:
annotation- AnnotationRef to set.screenIndex- the Screen index.annotationRefIndex- AnnotationRef index (unused).
-
setScreenDescription
Set the Description property of Screen.- Parameters:
description- Description to set.screenIndex- the Screen index.
-
setScreenID
Set the ID property of Screen.- Parameters:
id- ID to set.screenIndex- the Screen index.
-
setScreenName
Set the Name property of Screen.- Parameters:
name- Name to set.screenIndex- the Screen index.
-
setScreenPlateRef
Set the PlateRef property of Screen.- Parameters:
plate- PlateRef to set.screenIndex- the Screen index.plateRefIndex- PlateRef index (unused).
-
setScreenProtocolDescription
Set the ProtocolDescription property of Screen.- Parameters:
protocolDescription- ProtocolDescription to set.screenIndex- the Screen index.
-
setScreenProtocolIdentifier
Set the ProtocolIdentifier property of Screen.- Parameters:
protocolIdentifier- ProtocolIdentifier to set.screenIndex- the Screen index.
-
setScreenReagentSetDescription
Set the ReagentSetDescription property of Screen.- Parameters:
reagentSetDescription- ReagentSetDescription to set.screenIndex- the Screen index.
-
setScreenReagentSetIdentifier
Set the ReagentSetIdentifier property of Screen.- Parameters:
reagentSetIdentifier- ReagentSetIdentifier to set.screenIndex- the Screen index.
-
setScreenType
Set the Type property of Screen.- Parameters:
type- Type to set.screenIndex- the Screen index.
-
setStageLabelName
Set the Name property of StageLabel.- Parameters:
name- Name to set.imageIndex- the Image index.
-
setStageLabelX
Set the X property of StageLabel.- Parameters:
x- X to set.imageIndex- the Image index.
-
setStageLabelY
Set the Y property of StageLabel.- Parameters:
y- Y to set.imageIndex- the Image index.
-
setStageLabelZ
Set the Z property of StageLabel.- Parameters:
z- Z to set.imageIndex- the Image index.
-
setTagAnnotationAnnotationRef
void setTagAnnotationAnnotationRef(String annotation, int tagAnnotationIndex, int annotationRefIndex) Set the AnnotationRef property of TagAnnotation.- Parameters:
annotation- AnnotationRef to set.tagAnnotationIndex- the TagAnnotation index.annotationRefIndex- AnnotationRef index (unused).
-
setTagAnnotationAnnotator
Set the Annotator property of TagAnnotation.- Parameters:
annotator- Annotator to set.tagAnnotationIndex- the TagAnnotation index.
-
setTagAnnotationDescription
Set the Description property of TagAnnotation.- Parameters:
description- Description to set.tagAnnotationIndex- the TagAnnotation index.
-
setTagAnnotationID
Set the ID property of TagAnnotation.- Parameters:
id- ID to set.tagAnnotationIndex- the TagAnnotation index.
-
setTagAnnotationNamespace
Set the Namespace property of TagAnnotation.- Parameters:
namespace- Namespace to set.tagAnnotationIndex- the TagAnnotation index.
-
setTagAnnotationValue
Set the Value property of TagAnnotation.- Parameters:
value- Value to set.tagAnnotationIndex- the TagAnnotation index.
-
setTermAnnotationAnnotationRef
void setTermAnnotationAnnotationRef(String annotation, int termAnnotationIndex, int annotationRefIndex) Set the AnnotationRef property of TermAnnotation.- Parameters:
annotation- AnnotationRef to set.termAnnotationIndex- the TermAnnotation index.annotationRefIndex- AnnotationRef index (unused).
-
setTermAnnotationAnnotator
Set the Annotator property of TermAnnotation.- Parameters:
annotator- Annotator to set.termAnnotationIndex- the TermAnnotation index.
-
setTermAnnotationDescription
Set the Description property of TermAnnotation.- Parameters:
description- Description to set.termAnnotationIndex- the TermAnnotation index.
-
setTermAnnotationID
Set the ID property of TermAnnotation.- Parameters:
id- ID to set.termAnnotationIndex- the TermAnnotation index.
-
setTermAnnotationNamespace
Set the Namespace property of TermAnnotation.- Parameters:
namespace- Namespace to set.termAnnotationIndex- the TermAnnotation index.
-
setTermAnnotationValue
Set the Value property of TermAnnotation.- Parameters:
value- Value to set.termAnnotationIndex- the TermAnnotation index.
-
setTiffDataFirstC
Set the FirstC property of TiffData.- Parameters:
firstC- FirstC to set.imageIndex- the Image index.tiffDataIndex- the TiffData index.
-
setTiffDataFirstT
Set the FirstT property of TiffData.- Parameters:
firstT- FirstT to set.imageIndex- the Image index.tiffDataIndex- the TiffData index.
-
setTiffDataFirstZ
Set the FirstZ property of TiffData.- Parameters:
firstZ- FirstZ to set.imageIndex- the Image index.tiffDataIndex- the TiffData index.
-
setTiffDataIFD
Set the IFD property of TiffData.- Parameters:
ifd- IFD to set.imageIndex- the Image index.tiffDataIndex- the TiffData index.
-
setTiffDataPlaneCount
Set the PlaneCount property of TiffData.- Parameters:
planeCount- PlaneCount to set.imageIndex- the Image index.tiffDataIndex- the TiffData index.
-
setTimestampAnnotationAnnotationRef
void setTimestampAnnotationAnnotationRef(String annotation, int timestampAnnotationIndex, int annotationRefIndex) Set the AnnotationRef property of TimestampAnnotation.- Parameters:
annotation- AnnotationRef to set.timestampAnnotationIndex- the TimestampAnnotation index.annotationRefIndex- AnnotationRef index (unused).
-
setTimestampAnnotationAnnotator
Set the Annotator property of TimestampAnnotation.- Parameters:
annotator- Annotator to set.timestampAnnotationIndex- the TimestampAnnotation index.
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setTimestampAnnotationDescription
Set the Description property of TimestampAnnotation.- Parameters:
description- Description to set.timestampAnnotationIndex- the TimestampAnnotation index.
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setTimestampAnnotationID
Set the ID property of TimestampAnnotation.- Parameters:
id- ID to set.timestampAnnotationIndex- the TimestampAnnotation index.
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setTimestampAnnotationNamespace
Set the Namespace property of TimestampAnnotation.- Parameters:
namespace- Namespace to set.timestampAnnotationIndex- the TimestampAnnotation index.
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setTimestampAnnotationValue
Set the Value property of TimestampAnnotation.- Parameters:
value- Value to set.timestampAnnotationIndex- the TimestampAnnotation index.
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setTransmittanceRangeCutIn
Set the CutIn property of TransmittanceRange.- Parameters:
cutIn- CutIn to set.instrumentIndex- the Instrument index.filterIndex- the Filter index.
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setTransmittanceRangeCutInTolerance
void setTransmittanceRangeCutInTolerance(Length cutInTolerance, int instrumentIndex, int filterIndex) Set the CutInTolerance property of TransmittanceRange.- Parameters:
cutInTolerance- CutInTolerance to set.instrumentIndex- the Instrument index.filterIndex- the Filter index.
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setTransmittanceRangeCutOut
Set the CutOut property of TransmittanceRange.- Parameters:
cutOut- CutOut to set.instrumentIndex- the Instrument index.filterIndex- the Filter index.
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setTransmittanceRangeCutOutTolerance
void setTransmittanceRangeCutOutTolerance(Length cutOutTolerance, int instrumentIndex, int filterIndex) Set the CutOutTolerance property of TransmittanceRange.- Parameters:
cutOutTolerance- CutOutTolerance to set.instrumentIndex- the Instrument index.filterIndex- the Filter index.
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setTransmittanceRangeTransmittance
void setTransmittanceRangeTransmittance(PercentFraction transmittance, int instrumentIndex, int filterIndex) Set the Transmittance property of TransmittanceRange.- Parameters:
transmittance- Transmittance to set.instrumentIndex- the Instrument index.filterIndex- the Filter index.
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setUUIDValue
Set the text value of UUID.- Parameters:
value- text value.imageIndex- the Image index.tiffDataIndex- the TiffData index.
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setUUIDFileName
Set the FileName property of UUID.- Parameters:
fileName- FileName to set.imageIndex- the Image index.tiffDataIndex- the TiffData index.
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setWellAnnotationRef
Set the AnnotationRef property of Well.- Parameters:
annotation- AnnotationRef to set.plateIndex- the Plate index.wellIndex- the Well index.annotationRefIndex- AnnotationRef index (unused).
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setWellColor
Set the Color property of Well.- Parameters:
color- Color to set.plateIndex- the Plate index.wellIndex- the Well index.
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setWellColumn
Set the Column property of Well.- Parameters:
column- Column to set.plateIndex- the Plate index.wellIndex- the Well index.
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setWellExternalDescription
Set the ExternalDescription property of Well.- Parameters:
externalDescription- ExternalDescription to set.plateIndex- the Plate index.wellIndex- the Well index.
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setWellExternalIdentifier
Set the ExternalIdentifier property of Well.- Parameters:
externalIdentifier- ExternalIdentifier to set.plateIndex- the Plate index.wellIndex- the Well index.
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setWellID
Set the ID property of Well.- Parameters:
id- ID to set.plateIndex- the Plate index.wellIndex- the Well index.
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setWellReagentRef
Set the ReagentRef property of Well.- Parameters:
reagent- ReagentRef to set.plateIndex- the Plate index.wellIndex- the Well index.
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setWellRow
Set the Row property of Well.- Parameters:
row- Row to set.plateIndex- the Plate index.wellIndex- the Well index.
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setWellType
Set the Type property of Well.- Parameters:
type- Type to set.plateIndex- the Plate index.wellIndex- the Well index.
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setWellSampleID
Set the ID property of WellSample.- Parameters:
id- ID to set.plateIndex- the Plate index.wellIndex- the Well index.wellSampleIndex- the WellSample index.
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setWellSampleImageRef
Set the ImageRef property of WellSample.- Parameters:
image- ImageRef to set.plateIndex- the Plate index.wellIndex- the Well index.wellSampleIndex- the WellSample index.
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setWellSampleIndex
void setWellSampleIndex(NonNegativeInteger index, int plateIndex, int wellIndex, int wellSampleIndex) Set the Index property of WellSample.- Parameters:
index- Index to set.plateIndex- the Plate index.wellIndex- the Well index.wellSampleIndex- the WellSample index.
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setWellSamplePositionX
Set the PositionX property of WellSample.- Parameters:
positionX- PositionX to set.plateIndex- the Plate index.wellIndex- the Well index.wellSampleIndex- the WellSample index.
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setWellSamplePositionY
Set the PositionY property of WellSample.- Parameters:
positionY- PositionY to set.plateIndex- the Plate index.wellIndex- the Well index.wellSampleIndex- the WellSample index.
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setWellSampleTimepoint
void setWellSampleTimepoint(Timestamp timepoint, int plateIndex, int wellIndex, int wellSampleIndex) Set the Timepoint property of WellSample.- Parameters:
timepoint- Timepoint to set.plateIndex- the Plate index.wellIndex- the Well index.wellSampleIndex- the WellSample index.
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setXMLAnnotationAnnotationRef
void setXMLAnnotationAnnotationRef(String annotation, int XMLAnnotationIndex, int annotationRefIndex) Set the AnnotationRef property of XMLAnnotation.- Parameters:
annotation- AnnotationRef to set.XMLAnnotationIndex- the XMLAnnotation index.annotationRefIndex- AnnotationRef index (unused).
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setXMLAnnotationAnnotator
Set the Annotator property of XMLAnnotation.- Parameters:
annotator- Annotator to set.XMLAnnotationIndex- the XMLAnnotation index.
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setXMLAnnotationDescription
Set the Description property of XMLAnnotation.- Parameters:
description- Description to set.XMLAnnotationIndex- the XMLAnnotation index.
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setXMLAnnotationID
Set the ID property of XMLAnnotation.- Parameters:
id- ID to set.XMLAnnotationIndex- the XMLAnnotation index.
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setXMLAnnotationNamespace
Set the Namespace property of XMLAnnotation.- Parameters:
namespace- Namespace to set.XMLAnnotationIndex- the XMLAnnotation index.
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setXMLAnnotationValue
Set the Value property of XMLAnnotation.- Parameters:
value- Value to set.XMLAnnotationIndex- the XMLAnnotation index.
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