Package ome.xml.model
Class Experimenter
java.lang.Object
ome.xml.model.AbstractOMEModelObject
ome.xml.model.Experimenter
- All Implemented Interfaces:
OMEModelObject
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Field Summary
Fields -
Constructor Summary
ConstructorsConstructorDescriptionDefault constructor.Experimenter(Experimenter orig) Copy constructor.Experimenter(Element element, OMEModel model) Constructs Experimenter recursively from an XML DOM tree. -
Method Summary
Modifier and TypeMethodDescriptionasXMLElement(Document document) Takes the entire object hierarchy and produces an XML DOM tree.asXMLElement(Document document, Element Experimenter_element) Takes the entire object hierarchy and produced an XML DOM tree taking into account class hierarchy.getEmail()getID()getLinkedAnnotation(int index) getLinkedDataset(int index) getLinkedExperiment(int index) getLinkedExperimenterGroup(int index) getLinkedImage(int index) getLinkedMicrobeamManipulation(int index) getLinkedProject(int index) booleanlink(Reference reference, OMEModelObject o) Link a given OME model object to this model object.booleanbooleanbooleanbooleanbooleanbooleanbooleanvoidvoidsetFirstName(String firstName) voidvoidsetInstitution(String institution) voidsetLastName(String lastName) setLinkedAnnotation(int index, Annotation o) setLinkedDataset(int index, Dataset o) setLinkedExperiment(int index, Experiment o) setLinkedExperimenterGroup(int index, ExperimenterGroup o) setLinkedImage(int index, Image o) setLinkedMicrobeamManipulation(int index, MicrobeamManipulation o) setLinkedProject(int index, Project o) voidsetMiddleName(String middleName) voidsetUserName(String userName) intintintintintintintbooleanbooleanbooleanbooleanbooleanunlinkImage(Image o) booleanbooleanvoidUpdates Experimenter recursively from an XML DOM tree.Methods inherited from class ome.xml.model.AbstractOMEModelObject
getChildrenByTagName, stripNamespacePrefix
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Field Details
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NAMESPACE
- See Also:
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Constructor Details
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Experimenter
public Experimenter()Default constructor. -
Experimenter
Constructs Experimenter recursively from an XML DOM tree.- Parameters:
element- Root of the XML DOM tree to construct a model object graph from.model- Handler for the OME model which keeps track of instances and references seen during object population.- Throws:
EnumerationException- If there is an error instantiating an enumeration during model object creation.
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Experimenter
Copy constructor.
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Method Details
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update
Updates Experimenter recursively from an XML DOM tree. NOTE: No properties are removed, only added or updated.- Specified by:
updatein interfaceOMEModelObject- Overrides:
updatein classAbstractOMEModelObject- Parameters:
element- Root of the XML DOM tree to construct a model object graph from.model- Handler for the OME model which keeps track of instances and references seen during object population.- Throws:
EnumerationException- If there is an error instantiating an enumeration during model object creation.
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link
Description copied from interface:OMEModelObjectLink a given OME model object to this model object.- Specified by:
linkin interfaceOMEModelObject- Overrides:
linkin classAbstractOMEModelObject- Parameters:
reference- The type qualifier for the reference. This should be the corresponding reference type foro. If, for example,ois of typeImage,referenceMUST be of typeImageRef.o- Model object to link to.- Returns:
trueif this model object was able to handle the reference,falseotherwise.
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getID
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setID
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getFirstName
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setFirstName
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getMiddleName
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setMiddleName
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getLastName
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setLastName
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getEmail
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setEmail
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getInstitution
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setInstitution
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getUserName
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setUserName
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sizeOfLinkedAnnotationList
public int sizeOfLinkedAnnotationList() -
copyLinkedAnnotationList
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getLinkedAnnotation
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setLinkedAnnotation
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linkAnnotation
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unlinkAnnotation
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sizeOfLinkedImageList
public int sizeOfLinkedImageList() -
copyLinkedImageList
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getLinkedImage
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setLinkedImage
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linkImage
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unlinkImage
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sizeOfLinkedMicrobeamManipulationList
public int sizeOfLinkedMicrobeamManipulationList() -
copyLinkedMicrobeamManipulationList
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getLinkedMicrobeamManipulation
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setLinkedMicrobeamManipulation
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linkMicrobeamManipulation
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unlinkMicrobeamManipulation
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sizeOfLinkedProjectList
public int sizeOfLinkedProjectList() -
copyLinkedProjectList
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getLinkedProject
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setLinkedProject
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linkProject
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unlinkProject
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sizeOfLinkedExperimenterGroupList
public int sizeOfLinkedExperimenterGroupList() -
copyLinkedExperimenterGroupList
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getLinkedExperimenterGroup
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setLinkedExperimenterGroup
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linkExperimenterGroup
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unlinkExperimenterGroup
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sizeOfLinkedDatasetList
public int sizeOfLinkedDatasetList() -
copyLinkedDatasetList
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getLinkedDataset
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setLinkedDataset
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linkDataset
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unlinkDataset
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sizeOfLinkedExperimentList
public int sizeOfLinkedExperimentList() -
copyLinkedExperimentList
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getLinkedExperiment
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setLinkedExperiment
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linkExperiment
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unlinkExperiment
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asXMLElement
Description copied from interface:OMEModelObjectTakes the entire object hierarchy and produces an XML DOM tree.- Specified by:
asXMLElementin interfaceOMEModelObject- Specified by:
asXMLElementin classAbstractOMEModelObject- Parameters:
document- Destination document for element creation, etc.- Returns:
- XML DOM tree root element for this model object.
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asXMLElement
Description copied from class:AbstractOMEModelObjectTakes the entire object hierarchy and produced an XML DOM tree taking into account class hierarchy.- Overrides:
asXMLElementin classAbstractOMEModelObject- Parameters:
document- Destination document for element creation, etc.Experimenter_element- Element from the subclass. Ifnulla new element will be created of this class.- Returns:
elementpopulated with properties from this class.
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