Package ome.xml.model
Class Pixels
java.lang.Object
ome.xml.model.AbstractOMEModelObject
ome.xml.model.Pixels
- All Implemented Interfaces:
OMEModelObject
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Field Summary
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Constructor Summary
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Method Summary
Modifier and TypeMethodDescriptionvoidaddBinData(BinData binData) voidaddChannel(Channel channel) voidvoidaddTiffData(TiffData tiffData) asXMLElement(Document document) Takes the entire object hierarchy and produces an XML DOM tree.asXMLElement(Document document, Element Pixels_element) Takes the entire object hierarchy and produced an XML DOM tree taking into account class hierarchy.voidvoidvoidvoidgetBinData(int index) getChannel(int index) getID()static Stringstatic Stringstatic StringgetPlane(int index) getSizeC()getSizeT()getSizeX()getSizeY()getSizeZ()getTiffData(int index) static StringgetType()booleanlink(Reference reference, OMEModelObject o) Link a given OME model object to this model object.voidremoveBinData(BinData binData) voidremoveChannel(Channel channel) voidremovePlane(Plane plane) voidremoveTiffData(TiffData tiffData) voidsetBigEndian(Boolean bigEndian) setBinData(int index, BinData binData) setChannel(int index, Channel channel) voidsetDimensionOrder(DimensionOrder dimensionOrder) voidvoidsetInterleaved(Boolean interleaved) voidsetMetadataOnly(MetadataOnly metadataOnly) voidsetPhysicalSizeX(Length physicalSizeX) voidsetPhysicalSizeY(Length physicalSizeY) voidsetPhysicalSizeZ(Length physicalSizeZ) voidsetSignificantBits(PositiveInteger significantBits) voidsetSizeC(PositiveInteger sizeC) voidsetSizeT(PositiveInteger sizeT) voidsetSizeX(PositiveInteger sizeX) voidsetSizeY(PositiveInteger sizeY) voidsetSizeZ(PositiveInteger sizeZ) setTiffData(int index, TiffData tiffData) voidsetTimeIncrement(Time timeIncrement) voidintintintintvoidUpdates Pixels recursively from an XML DOM tree.Methods inherited from class ome.xml.model.AbstractOMEModelObject
getChildrenByTagName, stripNamespacePrefix
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Field Details
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NAMESPACE
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Constructor Details
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Pixels
public Pixels()Default constructor. -
Pixels
Constructs Pixels recursively from an XML DOM tree.- Parameters:
element- Root of the XML DOM tree to construct a model object graph from.model- Handler for the OME model which keeps track of instances and references seen during object population.- Throws:
EnumerationException- If there is an error instantiating an enumeration during model object creation.
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Pixels
Copy constructor.
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Method Details
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update
Updates Pixels recursively from an XML DOM tree. NOTE: No properties are removed, only added or updated.- Specified by:
updatein interfaceOMEModelObject- Overrides:
updatein classAbstractOMEModelObject- Parameters:
element- Root of the XML DOM tree to construct a model object graph from.model- Handler for the OME model which keeps track of instances and references seen during object population.- Throws:
EnumerationException- If there is an error instantiating an enumeration during model object creation.
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link
Description copied from interface:OMEModelObjectLink a given OME model object to this model object.- Specified by:
linkin interfaceOMEModelObject- Overrides:
linkin classAbstractOMEModelObject- Parameters:
reference- The type qualifier for the reference. This should be the corresponding reference type foro. If, for example,ois of typeImage,referenceMUST be of typeImageRef.o- Model object to link to.- Returns:
trueif this model object was able to handle the reference,falseotherwise.
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getID
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setID
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getDimensionOrder
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setDimensionOrder
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getType
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setType
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getSignificantBits
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setSignificantBits
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getInterleaved
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setInterleaved
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getBigEndian
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setBigEndian
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getSizeX
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setSizeX
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getSizeY
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setSizeY
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getSizeZ
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setSizeZ
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getSizeC
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setSizeC
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getSizeT
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setSizeT
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getPhysicalSizeX
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setPhysicalSizeX
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getPhysicalSizeXUnitXsdDefault
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getPhysicalSizeY
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setPhysicalSizeY
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getPhysicalSizeYUnitXsdDefault
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getPhysicalSizeZ
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setPhysicalSizeZ
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getPhysicalSizeZUnitXsdDefault
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getTimeIncrement
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setTimeIncrement
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getTimeIncrementUnitXsdDefault
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sizeOfChannelList
public int sizeOfChannelList() -
copyChannelList
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clearChannelList
public void clearChannelList() -
getChannel
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setChannel
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addChannel
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removeChannel
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sizeOfBinDataList
public int sizeOfBinDataList() -
copyBinDataList
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clearBinDataList
public void clearBinDataList() -
getBinData
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setBinData
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addBinData
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removeBinData
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sizeOfTiffDataList
public int sizeOfTiffDataList() -
copyTiffDataList
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clearTiffDataList
public void clearTiffDataList() -
getTiffData
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setTiffData
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addTiffData
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removeTiffData
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getMetadataOnly
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setMetadataOnly
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sizeOfPlaneList
public int sizeOfPlaneList() -
copyPlaneList
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clearPlaneList
public void clearPlaneList() -
getPlane
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setPlane
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addPlane
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removePlane
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asXMLElement
Description copied from interface:OMEModelObjectTakes the entire object hierarchy and produces an XML DOM tree.- Specified by:
asXMLElementin interfaceOMEModelObject- Specified by:
asXMLElementin classAbstractOMEModelObject- Parameters:
document- Destination document for element creation, etc.- Returns:
- XML DOM tree root element for this model object.
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asXMLElement
Description copied from class:AbstractOMEModelObjectTakes the entire object hierarchy and produced an XML DOM tree taking into account class hierarchy.- Overrides:
asXMLElementin classAbstractOMEModelObject- Parameters:
document- Destination document for element creation, etc.Pixels_element- Element from the subclass. Ifnulla new element will be created of this class.- Returns:
elementpopulated with properties from this class.
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