Package ome.xml.model
Class Project
java.lang.Object
ome.xml.model.AbstractOMEModelObject
ome.xml.model.Project
- All Implemented Interfaces:
OMEModelObject
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Field Summary
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Constructor Summary
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Method Summary
Modifier and TypeMethodDescriptionasXMLElement(Document document) Takes the entire object hierarchy and produces an XML DOM tree.asXMLElement(Document document, Element Project_element) Takes the entire object hierarchy and produced an XML DOM tree taking into account class hierarchy.getID()getLinkedAnnotation(int index) getLinkedDataset(int index) getName()booleanlink(Reference reference, OMEModelObject o) Link a given OME model object to this model object.booleanbooleanvoidvoidvoidsetDescription(String description) voidsetLinkedAnnotation(int index, Annotation o) setLinkedDataset(int index, Dataset o) voidintintbooleanbooleanvoidvoidvoidUpdates Project recursively from an XML DOM tree.Methods inherited from class ome.xml.model.AbstractOMEModelObject
getChildrenByTagName, stripNamespacePrefix
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Field Details
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NAMESPACE
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Constructor Details
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Project
public Project()Default constructor. -
Project
Constructs Project recursively from an XML DOM tree.- Parameters:
element- Root of the XML DOM tree to construct a model object graph from.model- Handler for the OME model which keeps track of instances and references seen during object population.- Throws:
EnumerationException- If there is an error instantiating an enumeration during model object creation.
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Project
Copy constructor.
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Method Details
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update
Updates Project recursively from an XML DOM tree. NOTE: No properties are removed, only added or updated.- Specified by:
updatein interfaceOMEModelObject- Overrides:
updatein classAbstractOMEModelObject- Parameters:
element- Root of the XML DOM tree to construct a model object graph from.model- Handler for the OME model which keeps track of instances and references seen during object population.- Throws:
EnumerationException- If there is an error instantiating an enumeration during model object creation.
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link
Description copied from interface:OMEModelObjectLink a given OME model object to this model object.- Specified by:
linkin interfaceOMEModelObject- Overrides:
linkin classAbstractOMEModelObject- Parameters:
reference- The type qualifier for the reference. This should be the corresponding reference type foro. If, for example,ois of typeImage,referenceMUST be of typeImageRef.o- Model object to link to.- Returns:
trueif this model object was able to handle the reference,falseotherwise.
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getName
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setName
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getID
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setID
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getDescription
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setDescription
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getLinkedExperimenter
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linkExperimenter
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unlinkExperimenter
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getLinkedExperimenterGroup
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linkExperimenterGroup
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unlinkExperimenterGroup
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sizeOfLinkedDatasetList
public int sizeOfLinkedDatasetList() -
copyLinkedDatasetList
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getLinkedDataset
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setLinkedDataset
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linkDataset
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unlinkDataset
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sizeOfLinkedAnnotationList
public int sizeOfLinkedAnnotationList() -
copyLinkedAnnotationList
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getLinkedAnnotation
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setLinkedAnnotation
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linkAnnotation
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unlinkAnnotation
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asXMLElement
Description copied from interface:OMEModelObjectTakes the entire object hierarchy and produces an XML DOM tree.- Specified by:
asXMLElementin interfaceOMEModelObject- Specified by:
asXMLElementin classAbstractOMEModelObject- Parameters:
document- Destination document for element creation, etc.- Returns:
- XML DOM tree root element for this model object.
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asXMLElement
Description copied from class:AbstractOMEModelObjectTakes the entire object hierarchy and produced an XML DOM tree taking into account class hierarchy.- Overrides:
asXMLElementin classAbstractOMEModelObject- Parameters:
document- Destination document for element creation, etc.Project_element- Element from the subclass. Ifnulla new element will be created of this class.- Returns:
elementpopulated with properties from this class.
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