Package ome.xml.model
Class MicrobeamManipulation
java.lang.Object
ome.xml.model.AbstractOMEModelObject
ome.xml.model.MicrobeamManipulation
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OMEModelObject
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Field Summary
Fields -
Constructor Summary
ConstructorsConstructorDescriptionDefault constructor.Copy constructor.MicrobeamManipulation(Element element, OMEModel model) Constructs MicrobeamManipulation recursively from an XML DOM tree. -
Method Summary
Modifier and TypeMethodDescriptionvoidaddLightSourceSettings(LightSourceSettings lightSourceSettings) asXMLElement(Document document) Takes the entire object hierarchy and produces an XML DOM tree.asXMLElement(Document document, Element MicrobeamManipulation_element) Takes the entire object hierarchy and produced an XML DOM tree taking into account class hierarchy.voidgetID()getLightSourceSettings(int index) getLinkedImage(int index) getLinkedROI(int index) getType()booleanlink(Reference reference, OMEModelObject o) Link a given OME model object to this model object.voidbooleanbooleanvoidremoveLightSourceSettings(LightSourceSettings lightSourceSettings) voidsetDescription(String description) voidsetExperiment(Experiment experiment_BackReference) voidsetLightSourceSettings(int index, LightSourceSettings lightSourceSettings) setLinkedImage(int index, Image o) setLinkedROI(int index, ROI o) voidintintintvoidbooleanunlinkImage(Image o) booleanvoidUpdates MicrobeamManipulation recursively from an XML DOM tree.Methods inherited from class ome.xml.model.AbstractOMEModelObject
getChildrenByTagName, stripNamespacePrefix
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Field Details
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NAMESPACE
- See Also:
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Constructor Details
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MicrobeamManipulation
public MicrobeamManipulation()Default constructor. -
MicrobeamManipulation
Constructs MicrobeamManipulation recursively from an XML DOM tree.- Parameters:
element- Root of the XML DOM tree to construct a model object graph from.model- Handler for the OME model which keeps track of instances and references seen during object population.- Throws:
EnumerationException- If there is an error instantiating an enumeration during model object creation.
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MicrobeamManipulation
Copy constructor.
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Method Details
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update
Updates MicrobeamManipulation recursively from an XML DOM tree. NOTE: No properties are removed, only added or updated.- Specified by:
updatein interfaceOMEModelObject- Overrides:
updatein classAbstractOMEModelObject- Parameters:
element- Root of the XML DOM tree to construct a model object graph from.model- Handler for the OME model which keeps track of instances and references seen during object population.- Throws:
EnumerationException- If there is an error instantiating an enumeration during model object creation.
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link
Description copied from interface:OMEModelObjectLink a given OME model object to this model object.- Specified by:
linkin interfaceOMEModelObject- Overrides:
linkin classAbstractOMEModelObject- Parameters:
reference- The type qualifier for the reference. This should be the corresponding reference type foro. If, for example,ois of typeImage,referenceMUST be of typeImageRef.o- Model object to link to.- Returns:
trueif this model object was able to handle the reference,falseotherwise.
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getID
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setID
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getType
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setType
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getDescription
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setDescription
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sizeOfLinkedROIList
public int sizeOfLinkedROIList() -
copyLinkedROIList
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getLinkedROI
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setLinkedROI
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linkROI
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unlinkROI
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getLinkedExperimenter
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linkExperimenter
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unlinkExperimenter
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sizeOfLightSourceSettingsList
public int sizeOfLightSourceSettingsList() -
copyLightSourceSettingsList
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clearLightSourceSettingsList
public void clearLightSourceSettingsList() -
getLightSourceSettings
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setLightSourceSettings
public LightSourceSettings setLightSourceSettings(int index, LightSourceSettings lightSourceSettings) -
addLightSourceSettings
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removeLightSourceSettings
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sizeOfLinkedImageList
public int sizeOfLinkedImageList() -
copyLinkedImageList
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getLinkedImage
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setLinkedImage
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linkImage
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unlinkImage
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getExperiment
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setExperiment
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asXMLElement
Description copied from interface:OMEModelObjectTakes the entire object hierarchy and produces an XML DOM tree.- Specified by:
asXMLElementin interfaceOMEModelObject- Specified by:
asXMLElementin classAbstractOMEModelObject- Parameters:
document- Destination document for element creation, etc.- Returns:
- XML DOM tree root element for this model object.
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asXMLElement
Description copied from class:AbstractOMEModelObjectTakes the entire object hierarchy and produced an XML DOM tree taking into account class hierarchy.- Overrides:
asXMLElementin classAbstractOMEModelObject- Parameters:
document- Destination document for element creation, etc.MicrobeamManipulation_element- Element from the subclass. Ifnulla new element will be created of this class.- Returns:
elementpopulated with properties from this class.
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