Started by upstream project "BIOFORMATS-test-repo" build number 68
originally caused by:
Started by upstream project "Trigger" build number 76
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6
[BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins5983586980695143281.sh
+ '[' olympus-oir = slidebook ']'
++ date +%u
+ '[' 7 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_10152_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
[testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
[testng] File leak detector installed
[testng] 01:21:11,680 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 01:21:11,683 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service.
[testng] 01:21:11,683 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:21:11,685 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:21:11,686 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 01:21:11,686 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 01:21:11,687 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 01:21:11,687 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:21:11,688 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:21:11,689 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 01:21:11,690 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 01:21:11,691 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 01:21:11,938 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 01:21:11,938 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 01:21:11,988 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 01:21:11,988 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 01:21:12,001 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 01:21:12,002 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 01:21:12,002 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 01:21:12,003 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 01:21:12,003 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration.
[testng] 01:21:12,005 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point
[testng] 01:21:12,005 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 317 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-05-19 01:21:12,025] [main] java.version = 17.0.2
[testng] 01:21:12,031 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 01:21:12,031 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:21:12,109 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-05-19_01-21-12.log]
[testng] 01:21:12,111 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration.
[testng] [2024-05-19 01:21:12,115] [main] testng.directory = /data
[testng] [2024-05-19 01:21:12,115] [main] testng.configDirectory = /config
[testng] [2024-05-19 01:21:12,132] [main] testng.multiplier = 1.0
[testng] [2024-05-19 01:21:12,133] [main] testng.in-memory = false
[testng] [2024-05-19 01:21:12,134] [main] testng.allow-missing = false
[testng] [2024-05-19 01:21:12,134] [main] user.language = en
[testng] [2024-05-19 01:21:12,134] [main] user.country = ${user.country}
[testng] [2024-05-19 01:21:12,134] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-05-19 01:21:33,777] [main] ----------------------------------------
[testng] [2024-05-19 01:21:33,777] [main] Total files: 283
[testng] [2024-05-19 01:21:33,777] [main] Scan time: 21.643 s (76 ms/file)
[testng] [2024-05-19 01:21:33,777] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 186 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-05-19 01:30:19,708] [pool-1-thread-1] Initializing /data/olympus/Clipboard-calcium sparks_XYt.tif:
[testng] 01:30:19,709 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 01:30:19,709 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:30:19,714 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-05-19_01-30-19.log]
[testng] 01:30:19,715 |-INFO in ch.qos.logback.core.sift.SiftProcessor@324e0d22 - End of configuration.
[testng] [2024-05-19 01:30:19,821] [pool-1-thread-12] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.ome.tif:
[testng] 01:30:19,821 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 01:30:19,822 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:30:19,823 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-05-19_01-30-19.log]
[testng] 01:30:19,824 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6f3915d9 - End of configuration.
[testng] [2024-05-19 01:30:19,961] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif:
[testng] 01:30:19,961 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 01:30:19,962 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:30:19,963 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-05-19_01-30-19.log]
[testng] 01:30:19,964 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5dfc5d75 - End of configuration.
[testng] [2024-05-19 01:30:20,084] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.oir:
[testng] 01:30:20,085 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 01:30:20,085 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:30:20,086 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-05-19_01-30-20.log]
[testng] 01:30:20,087 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7e7ff374 - End of configuration.
[testng] [2024-05-19 01:30:20,260] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif:
[testng] 01:30:20,261 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 01:30:20,261 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:30:20,262 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-05-19_01-30-20.log]
[testng] 01:30:20,263 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5004cc95 - End of configuration.
[testng] [2024-05-19 01:30:20,406] [pool-1-thread-8] Initializing /data/qa-17270/image1.oir:
[testng] 01:30:20,406 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 01:30:20,406 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:30:20,407 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-05-19_01-30-20.log]
[testng] 01:30:20,408 |-INFO in ch.qos.logback.core.sift.SiftProcessor@c52d768 - End of configuration.
[testng] [2024-05-19 01:30:20,495] [pool-1-thread-7] Initializing /data/qa-17919/f10187.oir:
[testng] 01:30:20,496 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 01:30:20,496 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:30:20,497 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-05-19_01-30-20.log]
[testng] 01:30:20,498 |-INFO in ch.qos.logback.core.sift.SiftProcessor@58204d5e - End of configuration.
[testng] [2024-05-19 01:30:38,353] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0019.tif:
[testng] 01:30:38,353 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 01:30:38,354 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:30:38,355 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-05-19_01-30-38.log]
[testng] 01:30:38,356 |-INFO in ch.qos.logback.core.sift.SiftProcessor@241ab076 - End of configuration.
[testng] [2024-05-19 01:30:38,412] [pool-1-thread-5] Initializing /data/olympus/_stitched 4x4 zstack 10X_XYZ_/stack1/frame_t_0.ets:
[testng] 01:30:38,412 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 01:30:38,412 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:30:38,413 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-05-19_01-30-38.log]
[testng] 01:30:38,414 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3c5f3146 - End of configuration.
[testng] [2024-05-19 01:30:38,437] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif:
[testng] 01:30:38,437 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 01:30:38,437 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:30:38,439 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-05-19_01-30-38.log]
[testng] 01:30:38,439 |-INFO in ch.qos.logback.core.sift.SiftProcessor@68411d1e - End of configuration.
[testng] [2024-05-19 01:30:38,528] [pool-1-thread-3] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif:
[testng] 01:30:38,528 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 01:30:38,528 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:30:38,529 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-05-19_01-30-38.log]
[testng] 01:30:38,529 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7fe2e64c - End of configuration.
[testng] [2024-05-19 01:30:38,582] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif:
[testng] 01:30:38,582 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 01:30:38,582 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:30:38,583 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-05-19_01-30-38.log]
[testng] 01:30:38,583 |-INFO in ch.qos.logback.core.sift.SiftProcessor@66bd809a - End of configuration.
[testng] [2024-05-19 01:30:42,205] [pool-1-thread-11] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir:
[testng] [2024-05-19 01:30:42,500] [pool-1-thread-10] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif:
[testng] [2024-05-19 01:30:42,702] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Clipboard-Image_0033_0001.tif:
[testng] [2024-05-19 01:30:42,767] [pool-1-thread-2] Initializing /data/olympus/40X_4CH_XY.vsi:
[testng] [2024-05-19 01:30:42,893] [pool-1-thread-9] Initializing /data/qa-17331/60x zstack RS.ome.tif:
[testng] [2024-05-19 01:30:43,042] [pool-1-thread-1] Initializing /data/qa-17270/Clipboard-alexa488.tif:
[testng] [2024-05-19 01:30:43,143] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir:
[testng] [2024-05-19 01:30:43,695] [pool-1-thread-3] Initializing /data/qa-16881/P10D1 20150729_0019.oir:
[testng] [2024-05-19 01:30:43,966] [pool-1-thread-4] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir:
[testng] [2024-05-19 01:30:44,051] [pool-1-thread-6] Initializing /data/qa-17270/stack1.oir:
[testng] [2024-05-19 01:30:46,257] [pool-1-thread-5] Initializing /data/olympus/XYZt.vsi:
[testng] [2024-05-19 01:30:47,455] [pool-1-thread-5] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif:
[testng] [2024-05-19 01:30:47,569] [pool-1-thread-10] Initializing /data/qa-16881/P10-50 D2_0006.ome.tif:
[testng] [2024-05-19 01:30:47,688] [pool-1-thread-8] Initializing /data/olympus/40X_4CH_XY.oir:
[testng] [2024-05-19 01:30:47,833] [pool-1-thread-9] Initializing /data/qa-16881/P10D1 20150729.ome.tif:
[testng] [2024-05-19 01:30:47,925] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.ome.tif:
[testng] [2024-05-19 01:30:48,023] [pool-1-thread-3] Initializing /data/martin/20170824_JupGFP_HisRFP_wL3_30xSI_4xzoom_0p5z_A01_G001_0001.oir:
[testng] [2024-05-19 01:31:40,286] [pool-1-thread-11] Initializing /data/public/etienne/Clipboard-venus stack.tif:
[testng] [2024-05-19 01:31:40,653] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Clipboard-Image_0099_0001.tif:
[testng] [2024-05-19 01:31:41,337] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-P10-50 D2_0006.tif:
[testng] [2024-05-19 01:31:41,383] [pool-1-thread-1] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir:
[testng] [2024-05-19 01:31:41,952] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif:
[testng] [2024-05-19 01:31:42,023] [pool-1-thread-5] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif:
[testng] [2024-05-19 01:31:42,180] [pool-1-thread-10] Initializing /data/qa-17335/Clipboard-stimulation_0001_LSM.tif:
[testng] [2024-05-19 01:31:42,261] [pool-1-thread-11] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-LILY POLLEN.tif:
[testng] [2024-05-19 01:31:42,487] [pool-1-thread-2] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png:
[testng] [2024-05-19 01:31:42,883] [pool-1-thread-2] Initializing /data/cudmore/20190401__0005.oir:
[testng] [2024-05-19 01:31:47,608] [pool-1-thread-12] Initializing /data/public/etienne/venus stack.oir:
[testng] [2024-05-19 01:31:48,029] [pool-1-thread-8] Initializing /data/qa-21508/Stitch_A01_G008.oir:
[testng] [2024-05-19 01:31:48,417] [pool-1-thread-9] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif:
[testng] [2024-05-19 01:31:48,623] [pool-1-thread-5] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.oir:
[testng] [2024-05-19 01:31:49,187] [pool-1-thread-11] Initializing /data/olympus/2017-04-21/Clipboard.tif:
[testng] [2024-05-19 01:31:49,493] [pool-1-thread-10] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/image_Cycle_02.oir:
[testng] [2024-05-19 01:31:50,890] [pool-1-thread-11] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir:
[testng] [2024-05-19 01:31:51,273] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif:
[testng] [2024-05-19 01:31:51,814] [pool-1-thread-12] Initializing /data/qa-17270/alexa488.oir:
[testng] [2024-05-19 01:31:52,917] [pool-1-thread-5] Initializing /data/qa-17331/60x zstack RS.oir:
[testng] [2024-05-19 01:31:53,133] [pool-1-thread-11] Initializing /data/qa-17335/OSR-Z.oir:
[testng] [2024-05-19 01:31:53,217] [pool-1-thread-10] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir:
[testng] [2024-05-19 01:31:53,526] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir:
[testng] [2024-05-19 01:31:54,486] [pool-1-thread-9] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir:
[testng] [2024-05-19 01:31:54,634] [pool-1-thread-6] Initializing /data/qa-17335/stimulation_0001_LSM.oir:
[testng] [2024-05-19 01:31:54,927] [pool-1-thread-11] Initializing /data/qa-17270/image1.ome.tif:
[testng] [2024-05-19 01:31:55,661] [pool-1-thread-12] Initializing /data/qa-17293/2-z-t_0001_LSM.ome.tif:
[testng] [2024-05-19 01:31:56,601] [pool-1-thread-5] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif:
[testng] [2024-05-19 01:31:56,683] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.ome.tif:
[testng] [2024-05-19 01:31:56,746] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.oir:
[testng] [2024-05-19 01:31:56,828] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Clipboard-Image_0001_0001.tif:
[testng] [2024-05-19 01:31:57,797] [pool-1-thread-6] Initializing /data/qa-17270/stack1.ome.tif:
[testng] [2024-05-19 01:31:58,197] [pool-1-thread-12] Initializing /data/qa-17335/Clipboard-OSR-Z.tif:
[testng] [2024-05-19 01:31:58,270] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.oir:
[testng] [2024-05-19 01:31:58,426] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.ome.tif:
[testng] [2024-05-19 01:31:58,751] [pool-1-thread-9] Initializing /data/qa-16881/P10D1 20150729_0024.oir:
[testng] [2024-05-19 01:31:59,251] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.oir:
[testng] [2024-05-19 01:31:59,381] [pool-1-thread-1] Initializing /data/qa-16881/W11-180 D3 20151021_0006.oir:
[testng] [2024-05-19 01:31:59,565] [pool-1-thread-5] Initializing /data/qa-17917/f10010.oir:
[testng] [2024-05-19 01:32:25,908] [pool-1-thread-10] Initializing /data/public/etienne/amy slice z stack_0001.ome.tif:
[testng] [2024-05-19 01:32:26,893] [pool-1-thread-12] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.oir:
[testng] [2024-05-19 01:32:27,076] [pool-1-thread-4] Initializing /data/qa-16881/W11-180 D3 20151021_0024.oir:
[testng] [2024-05-19 01:32:27,484] [pool-1-thread-11] Initializing /data/qa-17270/Clipboard-stack1.tif:
[testng] [2024-05-19 01:32:27,621] [pool-1-thread-6] Initializing /data/qa-18802/20171020_JupGFPHisRFP_L3_30xSI_galvo_p5z_p1xy_better_than_nyquist.oir:
[testng] [2024-05-19 01:32:28,549] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.oir:
[testng] [2024-05-19 01:32:28,971] [pool-1-thread-1] Initializing /data/public/etienne/coupe shg stack_0001.ome.tif:
[testng] [2024-05-19 01:32:29,082] [pool-1-thread-10] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0001.tif:
[testng] [2024-05-19 01:32:29,622] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-Caged Glu-3 point.tif:
[testng] [2024-05-19 01:32:29,688] [pool-1-thread-12] Initializing /data/olympus/Stitched_XYZ.oir:
[testng] [2024-05-19 01:32:30,463] [pool-1-thread-9] Initializing /data/olympus/Stitched_XYZ.ome.tif:
[testng] [2024-05-19 01:32:30,554] [pool-1-thread-11] Initializing /data/qa-16871/XY_0003.oir:
[testng] [2024-05-19 01:32:30,749] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.oir:
[testng] [2024-05-19 01:32:31,407] [pool-1-thread-8] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi:
[testng] [2024-05-19 01:32:31,609] [pool-1-thread-10] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi:
[testng] [2024-05-19 01:32:31,625] [pool-1-thread-1] Initializing /data/qa-16881/Clipboard-P10D1 20150729.tif:
[testng] [2024-05-19 01:32:31,768] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif:
[testng] [2024-05-19 01:32:31,834] [pool-1-thread-11] Initializing /data/qa-16881/P10-50 D2.oir:
[testng] [2024-05-19 01:32:32,249] [pool-1-thread-10] Initializing /data/qa-17409/Stitch_A01_G001.oir:
[testng] [2024-05-19 01:32:33,484] [pool-1-thread-12] Initializing /data/qa-16881/W11-180 D3 20151021_0024.ome.tif:
[testng] [2024-05-19 01:32:33,595] [pool-1-thread-4] Initializing /data/qa-16881/Clipboard-W4-0 D14 New 20150828_0007.tif:
[testng] [2024-05-19 01:32:33,966] [pool-1-thread-11] Initializing /data/olympus/2017-04-20/mito_0006_0001.ome.tif:
[testng] [2024-05-19 01:32:34,027] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.oir:
[testng] [2024-05-19 01:32:34,363] [pool-1-thread-8] Initializing /data/olympus/Clipboard-stitched 4x4 zstack 10X_XYZ.tif:
[testng] [2024-05-19 01:32:34,846] [pool-1-thread-9] Initializing /data/qa-17293/Clipboard.tif:
[testng] [2024-05-19 01:32:35,063] [pool-1-thread-4] Initializing /data/qa-17335/1.oir:
[testng] [2024-05-19 01:32:35,288] [pool-1-thread-12] Initializing /data/olympus/XYZt.ome.tif:
[testng] [2024-05-19 01:32:35,533] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Clipboard-Image_0091_0001.tif:
[testng] [2024-05-19 01:32:35,618] [pool-1-thread-1] Initializing /data/qa-17293/2-z-t_0001_LSM.oir:
[testng] [2024-05-19 01:32:36,612] [pool-1-thread-4] Initializing /data/olympus/XYZt.oir:
[testng] [2024-05-19 01:32:38,122] [pool-1-thread-8] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.ome.tif:
[testng] [2024-05-19 01:32:38,328] [pool-1-thread-9] Initializing /data/qa-16871/XY_0003.ome.tif:
[testng] [2024-05-19 01:32:38,528] [pool-1-thread-1] Initializing /data/public/etienne/venus stack.ome.tif:
[testng] [2024-05-19 01:32:38,648] [pool-1-thread-11] Initializing /data/qa-17270/Clipboard-image1.tif:
[testng] [2024-05-19 01:32:38,920] [pool-1-thread-10] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir:
[testng] [2024-05-19 01:32:39,929] [pool-1-thread-12] Initializing /data/qa-17922/example_multipart.oir:
[testng] [2024-05-19 01:33:01,555] [pool-1-thread-9] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir:
[testng] [2024-05-19 01:33:05,137] [pool-1-thread-6] Initializing /data/olympus/_calcium sparks_XYt_/stack1/frame_t_0.ets:
[testng] [2024-05-19 01:33:05,397] [pool-1-thread-8] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif:
[testng] [2024-05-19 01:33:05,644] [pool-1-thread-11] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif:
[testng] [2024-05-19 01:33:06,030] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir:
[testng] [2024-05-19 01:33:06,213] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif:
[testng] [2024-05-19 01:33:06,419] [pool-1-thread-2] Initializing /data/public/etienne/amy slice z stack_0001.oir:
[testng] [2024-05-19 01:33:06,861] [pool-1-thread-1] Initializing /data/qa-16881/P10-50 D2_0006.oir:
[testng] [2024-05-19 01:33:07,095] [pool-1-thread-11] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.ome.tif:
[testng] [2024-05-19 01:33:07,327] [pool-1-thread-10] Initializing /data/olympus/calcium sparks_XYt.oir:
[testng] [2024-05-19 01:33:07,828] [pool-1-thread-8] Initializing /data/qa-16881/Clipboard-P10-50 D2.tif:
[testng] [2024-05-19 01:33:08,209] [pool-1-thread-6] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir:
[testng] [2024-05-19 01:33:08,756] [pool-1-thread-1] Initializing /data/qa-17331/Clipboard.tif:
[testng] [2024-05-19 01:33:08,815] [pool-1-thread-2] Initializing /data/qa-16881/Clipboard-W1-135 D6 New 20150818_0010.tif:
[testng] [2024-05-19 01:33:08,943] [pool-1-thread-11] Initializing /data/olympus/spectral_scan_XYL.oir:
[testng] [2024-05-19 01:33:09,517] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-PA-GFPv-2.tif:
[testng] [2024-05-19 01:33:10,368] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.oir:
[testng] [2024-05-19 01:33:11,042] [pool-1-thread-4] Initializing /data/olympus/Clipboard-XYZt.tif:
[testng] [2024-05-19 01:33:11,142] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif:
[testng] [2024-05-19 01:33:11,324] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif:
[testng] [2024-05-19 01:33:12,066] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.oir:
[testng] [2024-05-19 01:33:12,626] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif:
[testng] [2024-05-19 01:33:12,685] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x-1.oir.vsi:
[testng] [2024-05-19 01:33:12,997] [pool-1-thread-4] Initializing /data/qa-17335/OSR-Z.ome.tif:
[testng] [2024-05-19 01:33:13,067] [pool-1-thread-11] Initializing /data/olympus/spectral_scan_XYL.ome.tif:
[testng] [2024-05-19 01:33:14,287] [pool-1-thread-6] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.ome.tif:
[testng] [2024-05-19 01:33:14,529] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.ome.tif:
[testng] [2024-05-19 01:33:14,705] [pool-1-thread-1] Initializing /data/qa-16881/Clipboard-P10-50 D2_0019.tif:
[testng] [2024-05-19 01:33:14,992] [pool-1-thread-10] Initializing /data/olympus/2017-04-20/Clipboard.tif:
[testng] [2024-05-19 01:33:15,186] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.oir:
[testng] [2024-05-19 01:33:15,526] [pool-1-thread-11] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0024.tif:
[testng] [2024-05-19 01:33:16,287] [pool-1-thread-2] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif:
[testng] [2024-05-19 01:33:16,516] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Clipboard-Image_0079_0001.tif:
[testng] [2024-05-19 01:33:16,743] [pool-1-thread-8] Initializing /data/olympus/2021-04-20/overview 2 x_Cycle_01/matl.omp2info:
[testng] [2024-05-19 01:33:17,244] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir:
[testng] [2024-05-19 01:33:17,342] [pool-1-thread-10] Initializing /data/olympus/2017-04-20/mito_0006_0001.oir:
[testng] [2024-05-19 01:33:17,584] [pool-1-thread-4] Initializing /data/qa-16881/P10D1 20150729.oir:
[testng] [2024-05-19 01:33:18,207] [pool-1-thread-6] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z_CONTROL.oir:
[testng] [2024-05-19 01:33:18,826] [pool-1-thread-10] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info:
[testng] [2024-05-19 01:33:21,728] [pool-1-thread-2] Initializing /data/qa-16881/P10D1 20150729_0019.ome.tif:
[testng] [2024-05-19 01:33:21,860] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.ome.tif:
[testng] [2024-05-19 01:33:22,185] [pool-1-thread-11] Initializing /data/qa-17335/1.ome.tif:
[testng] [2024-05-19 01:33:22,790] [pool-1-thread-4] Initializing /data/olympus/calcium sparks.jpg:
[testng] [2024-05-19 01:33:23,125] [pool-1-thread-8] Initializing /data/qa-16881/Clipboard-W1-75 D11 New 20150825_0004.tif:
[testng] [2024-05-19 01:33:23,554] [pool-1-thread-2] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.ome.tif:
[testng] [2024-05-19 01:33:23,775] [pool-1-thread-11] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir:
[testng] [2024-05-19 01:33:25,043] [pool-1-thread-1] Initializing /data/public/etienne/coupe shg stack_0001.oir:
[testng] [2024-05-19 01:33:25,789] [pool-1-thread-6] Initializing /data/qa-17409/Stitch_A01_G001-exported.ome.tif:
[testng] [2024-05-19 01:33:26,034] [pool-1-thread-8] Initializing /data/qa-16871/Clipboard.tif:
[testng] [2024-05-19 01:33:26,618] [pool-1-thread-4] Initializing /data/qa-16881/P10-50 D2_0019.ome.tif:
[testng] [2024-05-19 01:33:26,875] [pool-1-thread-2] Initializing /data/olympus/2017-11-20/fish_overview/fish-overview-night.oir:
[testng] [2024-05-19 01:33:32,189] [pool-1-thread-1] Initializing /data/qa-17335/Clipboard-1.tif:
[testng] [2024-05-19 01:33:32,232] [pool-1-thread-8] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif:
[testng] [2024-05-19 01:33:33,094] [pool-1-thread-4] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir:
[testng] [2024-05-19 01:33:33,515] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif:
[testng] [2024-05-19 01:33:33,560] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif:
[testng] [2024-05-19 01:33:33,922] [pool-1-thread-11] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif:
[testng] [2024-05-19 01:33:34,692] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.oir:
[testng] [2024-05-19 01:33:34,805] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Clipboard-Image_0050_0001.tif:
[testng] [2024-05-19 01:33:35,497] [pool-1-thread-11] Initializing /data/olympus/2017-11-20/xytz_golgi/xytz_golgi.oir:
[testng] [2024-05-19 01:33:36,440] [pool-1-thread-6] Initializing /data/qa-16881/P10D1 20150729_0024.ome.tif:
[testng] [2024-05-19 01:33:36,782] [pool-1-thread-4] Initializing /data/qa-17409/Clipboard.tif:
[testng] [2024-05-19 01:33:36,889] [pool-1-thread-1] Initializing /data/olympus/Clipboard-40X_4CH_XY.tif:
[testng] [2024-05-19 01:33:37,070] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/zebra shg.oir:
[testng] [2024-05-19 01:33:39,827] [pool-1-thread-1] Initializing /data/qa-16881/P10-50 D2.ome.tif:
[testng] [2024-05-19 01:33:40,164] [pool-1-thread-6] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir:
[testng] [2024-05-19 01:33:40,533] [pool-1-thread-4] Initializing /data/olympus/calcium sparks_XYt.ome.tif:
[testng] [2024-05-19 01:33:41,754] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0024.tif:
[testng] [2024-05-19 01:33:42,200] [pool-1-thread-1] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/matl.omp2info:
[testng] [2024-05-19 01:33:45,113] [pool-1-thread-9] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/matl.omp2info:
[testng] [2024-05-19 01:33:47,857] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif:
[testng] [2024-05-19 01:33:48,633] [pool-1-thread-4] Initializing /data/qa-17270/alexa488.ome.tif:
[testng] [2024-05-19 01:33:48,916] [pool-1-thread-6] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif:
[testng] [2024-05-19 01:33:50,137] [pool-1-thread-6] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir:
[testng] [2024-05-19 01:33:51,151] [pool-1-thread-4] Initializing /data/qa-16881/P10-50 D2_0019.oir:
[testng] [2024-05-19 01:33:52,279] [pool-1-thread-11] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi:
[testng] [2024-05-19 01:33:53,517] [pool-1-thread-6] Initializing /data/olympus/40X_4CH_XY.ome.tif:
[testng] [2024-05-19 01:33:53,779] [pool-1-thread-4] Initializing /data/olympus/Stitched_XYZ.vsi:
[testng] [2024-05-19 01:33:55,451] [pool-1-thread-8] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif:
[testng] [2024-05-19 01:33:55,541] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif:
[testng] [2024-05-19 01:33:55,795] [pool-1-thread-4] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir:
[testng] [2024-05-19 01:33:57,479] [pool-1-thread-11] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 9858, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 61 minutes 58 seconds
Finished: SUCCESS