Started by upstream project "BIOFORMATS-test-repo" build number 68
originally caused by:
 Started by upstream project "Trigger" build number 76
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3
[BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins12598546041228854980.sh
+ '[' specs = slidebook ']'
++ date +%u
+ '[' 7 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_10168_merge_ci -v /uod/idr/repos/curated/specs:/data -v /uod/idr-scratch/merge-ci/curated/specs:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
   [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
   [testng] File leak detector installed
   [testng] 01:24:19,661 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 01:24:19,663 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service.
   [testng] 01:24:19,663 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:24:19,665 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:24:19,665 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 01:24:19,666 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 01:24:19,667 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 01:24:19,667 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:24:19,667 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:24:19,668 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 01:24:19,669 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 01:24:19,669 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 01:24:19,896 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 01:24:19,897 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 01:24:19,929 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 01:24:19,929 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 01:24:19,936 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 01:24:19,936 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 01:24:19,937 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 01:24:19,937 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 01:24:19,937 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration.
   [testng] 01:24:19,938 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point
   [testng] 01:24:19,938 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 271 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-05-19 01:24:19,952] [main] java.version = 17.0.2
   [testng] 01:24:19,957 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 01:24:19,957 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:24:20,020 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-05-19_01-24-19.log]
   [testng] 01:24:20,022 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration.
   [testng] [2024-05-19 01:24:20,024] [main] testng.directory = /data
   [testng] [2024-05-19 01:24:20,025] [main] testng.configDirectory = /config
   [testng] [2024-05-19 01:24:20,037] [main] testng.multiplier = 1.0
   [testng] [2024-05-19 01:24:20,039] [main] testng.in-memory = false
   [testng] [2024-05-19 01:24:20,039] [main] testng.allow-missing = false
   [testng] [2024-05-19 01:24:20,039] [main] user.language = en
   [testng] [2024-05-19 01:24:20,039] [main] user.country = ${user.country}
   [testng] [2024-05-19 01:24:20,039] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-05-19 01:24:34,540] [main] ----------------------------------------
   [testng] [2024-05-19 01:24:34,541] [main] Total files: 226
   [testng] [2024-05-19 01:24:34,541] [main] Scan time: 14.501 s (64 ms/file)
   [testng] [2024-05-19 01:24:34,541] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 28 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-05-19 01:24:42,277] [pool-1-thread-1] Initializing /data/iplab/Blend_DIC.IPL: 
   [testng] 01:24:42,278 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 01:24:42,278 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:24:42,280 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-05-19_01-24-42.log]
   [testng] 01:24:42,281 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1aa69b22 - End of configuration.
   [testng] [2024-05-19 01:24:42,309] [pool-1-thread-12] Initializing /data/fluoview/Sample_TwoCH.TIF: 
   [testng] 01:24:42,310 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 01:24:42,310 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:24:42,311 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-05-19_01-24-42.log]
   [testng] 01:24:42,312 |-INFO in ch.qos.logback.core.sift.SiftProcessor@145cdf9b - End of configuration.
   [testng] [2024-05-19 01:24:42,369] [pool-1-thread-11] Initializing /data/zeiss_lsm/X-Y-Z-T-Ch-Tile-2.lsm: 
   [testng] 01:24:42,370 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 01:24:42,370 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:24:42,371 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-05-19_01-24-42.log]
   [testng] 01:24:42,372 |-INFO in ch.qos.logback.core.sift.SiftProcessor@52a734d1 - End of configuration.
   [testng] [2024-05-19 01:24:42,468] [pool-1-thread-10] Initializing /data/iplab/3t3 Cell.IPL: 
   [testng] 01:24:42,468 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 01:24:42,468 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:24:42,470 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-05-19_01-24-42.log]
   [testng] 01:24:42,470 |-INFO in ch.qos.logback.core.sift.SiftProcessor@736f2edb - End of configuration.
   [testng] [2024-05-19 01:24:42,477] [pool-1-thread-9] Initializing /data/fluoview/sample_labled_XYTCh.tif: 
   [testng] 01:24:42,478 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 01:24:42,478 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:24:42,479 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-05-19_01-24-42.log]
   [testng] 01:24:42,479 |-INFO in ch.qos.logback.core.sift.SiftProcessor@27761594 - End of configuration.
   [testng] [2024-05-19 01:24:42,506] [pool-1-thread-8] Initializing /data/fluoview/SpineAnimation.tif: 
   [testng] 01:24:42,506 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 01:24:42,506 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:24:42,507 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-05-19_01-24-42.log]
   [testng] 01:24:42,508 |-INFO in ch.qos.logback.core.sift.SiftProcessor@134e6961 - End of configuration.
   [testng] [2024-05-19 01:24:42,550] [pool-1-thread-7] Initializing /data/iplab/Chromosomes.IPL: 
   [testng] 01:24:42,551 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 01:24:42,551 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:24:42,552 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-05-19_01-24-42.log]
   [testng] 01:24:42,552 |-INFO in ch.qos.logback.core.sift.SiftProcessor@259294a0 - End of configuration.
   [testng] [2024-05-19 01:24:42,558] [pool-1-thread-6] Initializing /data/fluoview/sample_labled_XYZTCh.tif: 
   [testng] 01:24:42,559 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 01:24:42,559 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:24:42,560 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-05-19_01-24-42.log]
   [testng] 01:24:42,560 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3f7ac6fa - End of configuration.
   [testng] [2024-05-19 01:24:42,588] [pool-1-thread-5] Initializing /data/fluoview/SpineAnimation.avi: 
   [testng] 01:24:42,588 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 01:24:42,588 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:24:42,589 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-05-19_01-24-42.log]
   [testng] 01:24:42,590 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4a25cb77 - End of configuration.
   [testng] [2024-05-19 01:24:42,612] [pool-1-thread-4] Initializing /data/iplab/10x Blood and Bacteria.IPL: 
   [testng] 01:24:42,613 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 01:24:42,613 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:24:42,614 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-05-19_01-24-42.log]
   [testng] 01:24:42,614 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4e9f6443 - End of configuration.
   [testng] [2024-05-19 01:24:42,647] [pool-1-thread-3] Initializing /data/iplab/Blend_Dapi.IPL: 
   [testng] 01:24:42,647 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 01:24:42,647 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:24:42,648 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-05-19_01-24-42.log]
   [testng] 01:24:42,648 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2070a583 - End of configuration.
   [testng] [2024-05-19 01:24:42,658] [pool-1-thread-2] Initializing /data/zeiss_lsm/X-Y-Z-T-Ch-Tile--MultiTrack-1.lsm: 
   [testng] 01:24:42,658 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 01:24:42,658 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:24:42,659 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-05-19_01-24-42.log]
   [testng] 01:24:42,659 |-INFO in ch.qos.logback.core.sift.SiftProcessor@131149b8 - End of configuration.
   [testng] [2024-05-19 01:24:44,761] [pool-1-thread-1] Initializing /data/iplab/Color Histology.IPL: 
   [testng] [2024-05-19 01:24:44,768] [pool-1-thread-7] Initializing /data/fluoview/Sample_ThreeCH.TIF: 
   [testng] [2024-05-19 01:24:44,808] [pool-1-thread-10] Initializing /data/iplab/Color Image.IPL: 
   [testng] [2024-05-19 01:24:44,815] [pool-1-thread-3] Initializing /data/gatan/ImageReader2003/ImageReaderTest/TestFiles/test3.dm3: 
   [testng] [2024-05-19 01:24:44,824] [pool-1-thread-9] Initializing /data/fluoview/Sample_XYT.TIF: 
   [testng] [2024-05-19 01:24:44,864] [pool-1-thread-6] Initializing /data/iplab/16Bit XRay.IPL: 
   [testng] [2024-05-19 01:24:44,871] [pool-1-thread-5] Initializing /data/fluoview/sample_labled_XYZCh.tif: 
   [testng] [2024-05-19 01:24:44,910] [pool-1-thread-4] Initializing /data/zeiss_lsm/X-Y-Z-T-Ch-Tile-1.lsm: 
   [testng] [2024-05-19 01:24:45,002] [pool-1-thread-8] Initializing /data/iplab/Actin.IPL: 
   [testng] [2024-05-19 01:24:45,010] [pool-1-thread-12] Initializing /data/fluoview/Sample_XT.tif: 
   [testng] [2024-05-19 01:24:45,328] [pool-1-thread-8] Initializing /data/iplab/Blend_Fitc.IPL: 
   [testng] [2024-05-19 01:24:45,345] [pool-1-thread-10] Initializing /data/fluoview/Sample_XYZ.TIF: 
   [testng] [2024-05-19 01:24:45,461] [pool-1-thread-1] Initializing /data/gatan/ImageReader2003/ImageReaderTest/TestFiles/Test.dm3: 
   [testng] [2024-05-19 01:24:45,476] [pool-1-thread-6] Initializing /data/gatan/ImageReader2003/ImageReaderTest/TestFiles/Test2.dm3: 
   [testng] [2024-05-19 01:24:45,593] [pool-1-thread-3] Initializing /data/iplab/Blend_Final.IPL: 
   [testng] [2024-05-19 01:24:45,763] [pool-1-thread-5] Initializing /data/iplab/Blend_Tritc.IPL: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 1484, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 36 seconds
Finished: SUCCESS