Started by upstream project "BIOFORMATS-test-repo" build number 69
originally caused by:
Started by upstream project "Trigger" build number 77
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5
[BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins1936836895271030441.sh
+ '[' gatan = slidebook ']'
++ date +%u
+ '[' 1 -le 1 ']'
+ DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR'
+ sudo docker run --rm --name BIOFORMATS-test-folder_10308_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 01:21:37,560 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 01:21:37,562 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service.
[testng] 01:21:37,562 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:21:37,563 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:21:37,564 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 01:21:37,564 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 01:21:37,564 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 01:21:37,564 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:21:37,565 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:21:37,565 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 01:21:37,565 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 01:21:37,565 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 01:21:37,850 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 01:21:37,850 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 01:21:37,880 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 01:21:37,880 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 01:21:37,889 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 01:21:37,889 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 01:21:37,889 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 01:21:37,890 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 01:21:37,890 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration.
[testng] 01:21:37,891 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point
[testng] 01:21:37,891 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 326 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-05-20 01:21:37,901] [main] java.version = 1.8.0_342
[testng] 01:21:37,905 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 01:21:37,905 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:21:37,953 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-05-20_01-21-37.log]
[testng] 01:21:37,955 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
[testng] [2024-05-20 01:21:37,957] [main] testng.directory = /data
[testng] [2024-05-20 01:21:37,957] [main] testng.configDirectory = /config
[testng] [2024-05-20 01:21:37,969] [main] testng.multiplier = 1.0
[testng] [2024-05-20 01:21:37,969] [main] testng.in-memory = false
[testng] [2024-05-20 01:21:37,969] [main] testng.allow-missing = false
[testng] [2024-05-20 01:21:37,969] [main] user.language = fr
[testng] [2024-05-20 01:21:37,969] [main] user.country = FR
[testng] [2024-05-20 01:21:37,969] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2024-05-20 01:21:39,067] [main] ----------------------------------------
[testng] [2024-05-20 01:21:39,067] [main] Total files: 103
[testng] [2024-05-20 01:21:39,067] [main] Scan time: 1.098 s (10 ms/file)
[testng] [2024-05-20 01:21:39,067] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 98 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-05-20 01:21:47,864] [pool-1-thread-1] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4:
[testng] 01:21:47,865 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 01:21:47,865 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:21:47,867 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-05-20_01-21-47.log]
[testng] 01:21:47,867 |-INFO in ch.qos.logback.core.sift.SiftProcessor@11533f3 - End of configuration.
[testng] [2024-05-20 01:21:47,904] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4:
[testng] 01:21:47,904 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 01:21:47,904 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:21:47,905 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-05-20_01-21-47.log]
[testng] 01:21:47,905 |-INFO in ch.qos.logback.core.sift.SiftProcessor@657ee9dd - End of configuration.
[testng] [2024-05-20 01:21:47,926] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4:
[testng] 01:21:47,927 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 01:21:47,927 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:21:47,928 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-05-20_01-21-47.log]
[testng] 01:21:47,929 |-INFO in ch.qos.logback.core.sift.SiftProcessor@598a022f - End of configuration.
[testng] [2024-05-20 01:21:47,949] [pool-1-thread-10] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif:
[testng] 01:21:47,949 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 01:21:47,949 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:21:47,950 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-05-20_01-21-47.log]
[testng] 01:21:47,950 |-INFO in ch.qos.logback.core.sift.SiftProcessor@429ece63 - End of configuration.
[testng] [2024-05-20 01:21:47,993] [pool-1-thread-9] Initializing /data/qa-11392/Example_Gatan_File.dm4:
[testng] 01:21:47,994 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 01:21:47,994 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:21:47,995 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-05-20_01-21-47.log]
[testng] 01:21:47,995 |-INFO in ch.qos.logback.core.sift.SiftProcessor@17e1ea86 - End of configuration.
[testng] [2024-05-20 01:21:48,017] [pool-1-thread-8] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif:
[testng] 01:21:48,017 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 01:21:48,017 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:21:48,018 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-05-20_01-21-48.log]
[testng] 01:21:48,019 |-INFO in ch.qos.logback.core.sift.SiftProcessor@499080c3 - End of configuration.
[testng] [2024-05-20 01:21:48,117] [pool-1-thread-7] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3:
[testng] 01:21:48,117 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 01:21:48,117 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:21:48,118 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-05-20_01-21-48.log]
[testng] 01:21:48,119 |-INFO in ch.qos.logback.core.sift.SiftProcessor@58d26efe - End of configuration.
[testng] [2024-05-20 01:21:48,132] [pool-1-thread-6] Initializing /data/thorsten/60kx_HAADF_03.dm3:
[testng] 01:21:48,133 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 01:21:48,133 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:21:48,134 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-05-20_01-21-48.log]
[testng] 01:21:48,134 |-INFO in ch.qos.logback.core.sift.SiftProcessor@30706035 - End of configuration.
[testng] [2024-05-20 01:21:48,160] [pool-1-thread-5] Initializing /data/jay/Carbon.34.dm3:
[testng] 01:21:48,160 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 01:21:48,160 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:21:48,161 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-05-20_01-21-48.log]
[testng] 01:21:48,161 |-INFO in ch.qos.logback.core.sift.SiftProcessor@18cc9b0e - End of configuration.
[testng] [2024-05-20 01:21:48,302] [pool-1-thread-4] Initializing /data/jay/dnasample1.dm3:
[testng] 01:21:48,302 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 01:21:48,302 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:21:48,303 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-05-20_01-21-48.log]
[testng] 01:21:48,304 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4adf0450 - End of configuration.
[testng] [2024-05-20 01:21:48,327] [pool-1-thread-3] Initializing /data/jay/camtest1.dm3:
[testng] 01:21:48,327 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 01:21:48,327 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:21:48,328 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-05-20_01-21-48.log]
[testng] 01:21:48,328 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4ee844be - End of configuration.
[testng] [2024-05-20 01:21:48,369] [pool-1-thread-2] Initializing /data/jay/ViewDMtest.dm3:
[testng] 01:21:48,370 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 01:21:48,370 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:21:48,371 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-05-20_01-21-48.log]
[testng] 01:21:48,371 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6b8306de - End of configuration.
[testng] [2024-05-20 01:21:50,843] [pool-1-thread-10] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4:
[testng] [2024-05-20 01:21:50,861] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4:
[testng] [2024-05-20 01:21:51,221] [pool-1-thread-6] Initializing /data/jay/biosamplefullframe.dm3:
[testng] [2024-05-20 01:21:52,034] [pool-1-thread-8] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif:
[testng] [2024-05-20 01:21:52,168] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4:
[testng] [2024-05-20 01:21:52,845] [pool-1-thread-12] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3:
[testng] [2024-05-20 01:21:52,856] [pool-1-thread-11] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4:
[testng] [2024-05-20 01:21:53,291] [pool-1-thread-8] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3:
[testng] [2024-05-20 01:21:53,977] [pool-1-thread-1] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif:
[testng] [2024-05-20 01:21:55,288] [pool-1-thread-7] Initializing /data/melissa/annotation-test.dm3:
[testng] [2024-05-20 01:21:55,601] [pool-1-thread-7] Initializing /data/ofra/Co on INT 28-12-10.11.dm3:
[testng] [2024-05-20 01:21:55,724] [pool-1-thread-5] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3:
[testng] [2024-05-20 01:21:56,145] [pool-1-thread-4] Initializing /data/ofra/lowloss.dm3:
[testng] [2024-05-20 01:21:56,150] [pool-1-thread-7] Initializing /data/jay/samples/APC2a-e3.dm3:
[testng] [2024-05-20 01:21:56,159] [pool-1-thread-2] Initializing /data/jay/samples/APC2a-e5.dm3:
[testng] [2024-05-20 01:21:56,171] [pool-1-thread-3] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4:
[testng] [2024-05-20 01:21:56,451] [pool-1-thread-4] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4:
[testng] [2024-05-20 01:21:56,596] [pool-1-thread-9] Initializing /data/jay/DMtest2.dm3:
[testng] [2024-05-20 01:21:56,719] [pool-1-thread-6] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4:
[testng] [2024-05-20 01:21:56,834] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4:
[testng] [2024-05-20 01:21:57,071] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4:
[testng] [2024-05-20 01:21:57,105] [pool-1-thread-2] Initializing /data/qa-7642/8.dm4:
[testng] [2024-05-20 01:21:57,518] [pool-1-thread-7] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4:
[testng] [2024-05-20 01:21:57,636] [pool-1-thread-12] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif:
[testng] [2024-05-20 01:21:57,955] [pool-1-thread-2] Initializing /data/melissa/annotation-test.tif:
[testng] [2024-05-20 01:21:58,053] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4:
[testng] [2024-05-20 01:21:58,327] [pool-1-thread-2] Initializing /data/qa-21761/example.dm4:
[testng] [2024-05-20 01:21:58,387] [pool-1-thread-8] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4:
[testng] [2024-05-20 01:21:59,406] [pool-1-thread-4] Initializing /data/jay/recAmaghi.dm3:
[testng] [2024-05-20 01:21:59,772] [pool-1-thread-2] Initializing /data/jay/samples/APC2a-e3.tif:
[testng] [2024-05-20 01:22:00,060] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4:
[testng] [2024-05-20 01:22:00,960] [pool-1-thread-12] Initializing /data/jayne/AM-2/MonGb2-S8.dm3:
[testng] [2024-05-20 01:22:01,212] [pool-1-thread-5] Initializing /data/samples/mode-metadata/mode_format_test.dm3:
[testng] [2024-05-20 01:22:02,222] [pool-1-thread-2] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4:
[testng] [2024-05-20 01:22:02,327] [pool-1-thread-9] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif:
[testng] [2024-05-20 01:22:02,844] [pool-1-thread-3] Initializing /data/qa-21647/Sample2_L1-0002.dm4:
[testng] [2024-05-20 01:22:02,946] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4:
[testng] [2024-05-20 01:22:02,957] [pool-1-thread-9] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4:
[testng] [2024-05-20 01:22:04,380] [pool-1-thread-9] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4:
[testng] [2024-05-20 01:22:04,444] [pool-1-thread-3] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif:
[testng] [2024-05-20 01:22:04,892] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4:
[testng] [2024-05-20 01:22:06,347] [pool-1-thread-4] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3:
[testng] [2024-05-20 01:22:06,584] [pool-1-thread-2] Initializing /data/chip/Nanogold-1.dm3:
[testng] [2024-05-20 01:22:06,725] [pool-1-thread-12] Initializing /data/jay/smallerfile.dm3:
[testng] [2024-05-20 01:22:07,368] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4:
[testng] [2024-05-20 01:22:07,466] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4:
[testng] [2024-05-20 01:22:07,762] [pool-1-thread-5] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif:
[testng] [2024-05-20 01:22:08,107] [pool-1-thread-7] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4:
[testng] [2024-05-20 01:22:10,557] [pool-1-thread-9] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif:
[testng] [2024-05-20 01:22:10,629] [pool-1-thread-2] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4:
[testng] [2024-05-20 01:22:10,668] [pool-1-thread-12] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4:
[testng] [2024-05-20 01:22:11,179] [pool-1-thread-2] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif:
[testng] [2024-05-20 01:22:11,295] [pool-1-thread-12] Initializing /data/jay/samples/APC2a-e4.dm3:
[testng] [2024-05-20 01:22:11,631] [pool-1-thread-3] Initializing /data/samples/test-tiles.dm3:
[testng] [2024-05-20 01:22:11,826] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4:
[testng] [2024-05-20 01:22:11,878] [pool-1-thread-3] Initializing /data/jayne/AM-2/MonGb3-S3.dm3:
[testng] [2024-05-20 01:22:12,935] [pool-1-thread-12] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif:
[testng] [2024-05-20 01:22:14,648] [pool-1-thread-5] Initializing /data/jay/samples/APC2a-e5.tif:
[testng] [2024-05-20 01:22:15,891] [pool-1-thread-9] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4:
[testng] [2024-05-20 01:22:17,427] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4:
[testng] [2024-05-20 01:22:18,850] [pool-1-thread-3] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4:
[testng] [2024-05-20 01:22:19,558] [pool-1-thread-2] Initializing /data/jay/biosamplefullframetif.tif:
[testng] [2024-05-20 01:22:19,729] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4:
[testng] [2024-05-20 01:22:20,274] [pool-1-thread-4] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3:
[testng] [2024-05-20 01:22:20,793] [pool-1-thread-5] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4:
[testng] [2024-05-20 01:22:21,363] [pool-1-thread-5] Initializing /data/jay/recAmag6500dm.dm3:
[testng] [2024-05-20 01:22:21,617] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4:
[testng] [2024-05-20 01:22:22,902] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4:
[testng] [2024-05-20 01:22:23,208] [pool-1-thread-6] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4:
[testng] [2024-05-20 01:22:23,826] [pool-1-thread-6] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif:
[testng] [2024-05-20 01:22:24,914] [pool-1-thread-12] Initializing /data/jayne/AM-2/MonGb2-S9.dm3:
[testng] [2024-05-20 01:22:25,797] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4:
[testng] [2024-05-20 01:22:26,859] [pool-1-thread-10] Initializing /data/jay/DMtest.dm3:
[testng] [2024-05-20 01:22:28,245] [pool-1-thread-11] Initializing /data/jayne/AM-2/MonGb2-S7.dm3:
[testng] [2024-05-20 01:22:28,472] [pool-1-thread-12] Initializing /data/jayne/AM-2/MonGb3-S1.dm3:
[testng] [2024-05-20 01:22:28,679] [pool-1-thread-2] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4:
[testng] [2024-05-20 01:22:28,946] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4:
[testng] [2024-05-20 01:22:29,142] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4:
[testng] [2024-05-20 01:22:29,183] [pool-1-thread-5] Initializing /data/jay/dnasample.tif:
[testng] [2024-05-20 01:22:30,979] [pool-1-thread-11] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif:
[testng] [2024-05-20 01:22:31,619] [pool-1-thread-12] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4:
[testng] [2024-05-20 01:22:31,724] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4:
[testng] [2024-05-20 01:22:31,786] [pool-1-thread-6] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif:
[testng] [2024-05-20 01:22:32,158] [pool-1-thread-11] Initializing /data/jay/samples/APC2a-e4.tif:
[testng] [2024-05-20 01:22:32,366] [pool-1-thread-10] Initializing /data/jay/graphitedm3.dm3:
[testng] [2024-05-20 01:22:33,169] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 5194, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 1 minute 21 seconds
Finished: SUCCESS