Started by upstream project "BIOFORMATS-test-repo" build number 69
originally caused by:
Started by upstream project "Trigger" build number 77
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder
[BIOFORMATS-test-folder] $ /bin/bash -xe /tmp/jenkins15079193585737246053.sh
+ '[' fei = slidebook ']'
++ date +%u
+ '[' 1 -le 1 ']'
+ DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR'
+ sudo docker run --rm --name BIOFORMATS-test-folder_10333_merge_ci -v /uod/idr/repos/curated/fei:/data -v /uod/idr-scratch/merge-ci/curated/fei:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 01:26:11,209 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 01:26:11,254 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 01:26:11,291 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 01:26:11,291 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 01:26:11,301 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 01:26:11,301 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 01:26:11,301 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 01:26:11,302 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 01:26:11,302 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5c30a9b0 - End of configuration.
[testng] 01:26:11,303 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@7a69b07 - Registering current configuration as safe fallback point
[testng] 01:26:11,304 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5e82df6a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 458 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-05-20 01:26:11,319] [main] java.version = 1.8.0_342
[testng] 01:26:11,324 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 01:26:11,325 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:26:11,393 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-05-20_01-26-11.log]
[testng] 01:26:11,396 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
[testng] [2024-05-20 01:26:11,399] [main] testng.directory = /data
[testng] [2024-05-20 01:26:11,399] [main] testng.configDirectory = /config
[testng] [2024-05-20 01:26:11,420] [main] testng.multiplier = 1.0
[testng] [2024-05-20 01:26:11,420] [main] testng.in-memory = false
[testng] [2024-05-20 01:26:11,420] [main] testng.allow-missing = false
[testng] [2024-05-20 01:26:11,421] [main] user.language = fr
[testng] [2024-05-20 01:26:11,421] [main] user.country = FR
[testng] [2024-05-20 01:26:11,421] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2024-05-20 01:26:13,577] [main] ----------------------------------------
[testng] [2024-05-20 01:26:13,577] [main] Total files: 21
[testng] [2024-05-20 01:26:13,578] [main] Scan time: 2.156 s (102 ms/file)
[testng] [2024-05-20 01:26:13,578] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 18 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-05-20 01:26:16,770] [pool-1-thread-1] Initializing /data/peter/ZC_PTCS_ED_1000x_002.tif:
[testng] 01:26:16,771 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 01:26:16,771 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:26:16,772 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-05-20_01-26-16.log]
[testng] 01:26:16,772 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4b15717b - End of configuration.
[testng] [2024-05-20 01:26:16,874] [pool-1-thread-12] Initializing /data/venu/VENU03.TIF:
[testng] 01:26:16,874 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 01:26:16,874 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:26:16,875 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-05-20_01-26-16.log]
[testng] 01:26:16,876 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4446d908 - End of configuration.
[testng] [2024-05-20 01:26:16,941] [pool-1-thread-11] Initializing /data/venu/VENU_Five.TIF:
[testng] 01:26:16,941 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 01:26:16,942 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:26:16,942 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-05-20_01-26-16.log]
[testng] 01:26:16,943 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3da50015 - End of configuration.
[testng] [2024-05-20 01:26:16,967] [pool-1-thread-10] Initializing /data/venu/VENU01.TIF:
[testng] 01:26:16,967 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 01:26:16,968 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:26:16,968 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-05-20_01-26-16.log]
[testng] 01:26:16,969 |-INFO in ch.qos.logback.core.sift.SiftProcessor@16a8eedb - End of configuration.
[testng] [2024-05-20 01:26:17,019] [pool-1-thread-9] Initializing /data/venu/VENU_Seven.TIF:
[testng] 01:26:17,019 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 01:26:17,019 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:26:17,020 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-05-20_01-26-17.log]
[testng] 01:26:17,020 |-INFO in ch.qos.logback.core.sift.SiftProcessor@e7a5734 - End of configuration.
[testng] [2024-05-20 01:26:17,046] [pool-1-thread-8] Initializing /data/venu/VENU02.IMG:
[testng] 01:26:17,047 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 01:26:17,047 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:26:17,048 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-05-20_01-26-17.log]
[testng] 01:26:17,048 |-INFO in ch.qos.logback.core.sift.SiftProcessor@62a9bd16 - End of configuration.
[testng] [2024-05-20 01:26:17,065] [pool-1-thread-7] Initializing /data/venu/VENU_Four.TIF:
[testng] 01:26:17,065 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 01:26:17,065 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:26:17,066 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-05-20_01-26-17.log]
[testng] 01:26:17,067 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6eaea6c5 - End of configuration.
[testng] [2024-05-20 01:26:17,130] [pool-1-thread-6] Initializing /data/venu/VENU_Six.TIF:
[testng] 01:26:17,131 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 01:26:17,131 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:26:17,133 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-05-20_01-26-17.log]
[testng] 01:26:17,133 |-INFO in ch.qos.logback.core.sift.SiftProcessor@58bfd360 - End of configuration.
[testng] [2024-05-20 01:26:17,158] [pool-1-thread-5] Initializing /data/venu/VENU.TIF:
[testng] 01:26:17,158 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 01:26:17,158 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:26:17,159 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-05-20_01-26-17.log]
[testng] 01:26:17,159 |-INFO in ch.qos.logback.core.sift.SiftProcessor@288aa017 - End of configuration.
[testng] [2024-05-20 01:26:17,415] [pool-1-thread-4] Initializing /data/steffen/Batman_008.tif:
[testng] 01:26:17,415 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 01:26:17,415 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:26:17,416 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-05-20_01-26-17.log]
[testng] 01:26:17,416 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3e20348e - End of configuration.
[testng] [2024-05-20 01:26:17,452] [pool-1-thread-3] Initializing /data/qa-4264/08.51.17 CCD Acquire-Acquire CCD Image Display-Acquire CCD -0.tif:
[testng] 01:26:17,452 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 01:26:17,452 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:26:17,453 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-05-20_01-26-17.log]
[testng] 01:26:17,454 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1c510bcf - End of configuration.
[testng] [2024-05-20 01:26:17,567] [pool-1-thread-2] Initializing /data/venu/VENU03.IMG:
[testng] 01:26:17,567 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 01:26:17,567 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:26:17,568 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-05-20_01-26-17.log]
[testng] 01:26:17,569 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7ddcaa67 - End of configuration.
[testng] [2024-05-20 01:26:20,209] [pool-1-thread-9] Initializing /data/qa-10514/TITAN_FEI_TIFF_Test_Image.tif:
[testng] [2024-05-20 01:26:20,246] [pool-1-thread-8] Initializing /data/venu/VENU02.TIF:
[testng] [2024-05-20 01:26:20,302] [pool-1-thread-2] Initializing /data/antoine/Tile_001-002-000_0-000.tif:
[testng] [2024-05-20 01:26:20,352] [pool-1-thread-1] Initializing /data/venu/VENU01.IMG:
[testng] [2024-05-20 01:26:20,367] [pool-1-thread-12] Initializing /data/venu/VENU_Eight.TIF:
[testng] [2024-05-20 01:26:20,396] [pool-1-thread-10] Initializing /data/qa-11061/Tile_020-009-000_0.tif:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 954, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 17 seconds
Finished: SUCCESS