Started by upstream project "BIOFORMATS-test-repo" build number 73
originally caused by:
Started by upstream project "Trigger" build number 81
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@2
[BIOFORMATS-test-folder@2] $ /bin/bash -xe /tmp/jenkins12379859039353797463.sh
+ '[' lim = slidebook ']'
++ date +%u
+ '[' 5 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_10976_merge_ci -v /uod/idr/repos/curated/lim:/data -v /uod/idr-scratch/merge-ci/curated/lim:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 01:22:02,895 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 01:22:02,898 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service.
[testng] 01:22:02,898 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:22:02,900 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:22:02,900 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 01:22:02,900 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 01:22:02,901 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 01:22:02,901 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:22:02,902 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:22:02,903 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 01:22:02,903 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 01:22:02,903 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 01:22:03,199 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 01:22:03,200 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 01:22:03,238 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 01:22:03,238 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 01:22:03,254 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 01:22:03,254 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 01:22:03,254 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 01:22:03,255 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 01:22:03,255 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration.
[testng] 01:22:03,257 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point
[testng] 01:22:03,257 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 355 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-05-24 01:22:03,276] [main] java.version = 1.8.0_342
[testng] 01:22:03,284 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 01:22:03,284 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:22:03,385 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-05-24_01-22-03.log]
[testng] 01:22:03,388 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
[testng] [2024-05-24 01:22:03,392] [main] testng.directory = /data
[testng] [2024-05-24 01:22:03,392] [main] testng.configDirectory = /config
[testng] [2024-05-24 01:22:03,413] [main] testng.multiplier = 1.0
[testng] [2024-05-24 01:22:03,414] [main] testng.in-memory = false
[testng] [2024-05-24 01:22:03,414] [main] testng.allow-missing = false
[testng] [2024-05-24 01:22:03,414] [main] user.language = en
[testng] [2024-05-24 01:22:03,414] [main] user.country = ${user.country}
[testng] [2024-05-24 01:22:03,415] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2024-05-24 01:22:04,215] [main] ----------------------------------------
[testng] [2024-05-24 01:22:04,215] [main] Total files: 21
[testng] [2024-05-24 01:22:04,215] [main] Scan time: 0.8 s (38 ms/file)
[testng] [2024-05-24 01:22:04,215] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 20 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-05-24 01:22:05,997] [pool-1-thread-1] Initializing /data/venu/Kontrolle0015.lim:
[testng] 01:22:05,998 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 01:22:05,998 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:22:05,999 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-05-24_01-22-05.log]
[testng] 01:22:06,000 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1cf7e33e - End of configuration.
[testng] [2024-05-24 01:22:06,072] [pool-1-thread-12] Initializing /data/venu/Kontrolle0020.lim:
[testng] 01:22:06,072 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 01:22:06,072 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:22:06,073 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-05-24_01-22-06.log]
[testng] 01:22:06,074 |-INFO in ch.qos.logback.core.sift.SiftProcessor@72a6073b - End of configuration.
[testng] [2024-05-24 01:22:06,125] [pool-1-thread-11] Initializing /data/venu/Kontrolle0019.lim:
[testng] 01:22:06,125 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 01:22:06,125 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:22:06,167 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-05-24_01-22-06.log]
[testng] 01:22:06,167 |-INFO in ch.qos.logback.core.sift.SiftProcessor@15b19898 - End of configuration.
[testng] [2024-05-24 01:22:06,192] [pool-1-thread-10] Initializing /data/venu/Kontrolle0017.lim:
[testng] 01:22:06,192 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 01:22:06,192 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:22:06,193 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-05-24_01-22-06.log]
[testng] 01:22:06,193 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3559699d - End of configuration.
[testng] [2024-05-24 01:22:06,222] [pool-1-thread-9] Initializing /data/venu/Kontrolle0016.lim:
[testng] 01:22:06,222 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 01:22:06,222 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:22:06,223 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-05-24_01-22-06.log]
[testng] 01:22:06,223 |-INFO in ch.qos.logback.core.sift.SiftProcessor@191f95f - End of configuration.
[testng] [2024-05-24 01:22:06,259] [pool-1-thread-8] Initializing /data/venu/Kontrolle0008.lim:
[testng] 01:22:06,260 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 01:22:06,260 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:22:06,261 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-05-24_01-22-06.log]
[testng] 01:22:06,262 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2636947a - End of configuration.
[testng] [2024-05-24 01:22:06,280] [pool-1-thread-7] Initializing /data/venu/Kontrolle0001.lim:
[testng] 01:22:06,281 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 01:22:06,281 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:22:06,282 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-05-24_01-22-06.log]
[testng] 01:22:06,282 |-INFO in ch.qos.logback.core.sift.SiftProcessor@276f289d - End of configuration.
[testng] [2024-05-24 01:22:06,300] [pool-1-thread-6] Initializing /data/venu/Kontrolle0003.lim:
[testng] 01:22:06,300 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 01:22:06,301 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:22:06,302 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-05-24_01-22-06.log]
[testng] 01:22:06,303 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5e8de943 - End of configuration.
[testng] [2024-05-24 01:22:06,354] [pool-1-thread-5] Initializing /data/venu/Kontrolle0012.lim:
[testng] 01:22:06,355 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 01:22:06,355 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:22:06,356 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-05-24_01-22-06.log]
[testng] 01:22:06,357 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3698fb4a - End of configuration.
[testng] [2024-05-24 01:22:06,378] [pool-1-thread-4] Initializing /data/venu/Kontrolle0009.lim:
[testng] 01:22:06,379 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 01:22:06,379 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:22:06,379 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-05-24_01-22-06.log]
[testng] 01:22:06,380 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3793f155 - End of configuration.
[testng] [2024-05-24 01:22:06,399] [pool-1-thread-3] Initializing /data/venu/Kontrolle0013.lim:
[testng] 01:22:06,399 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 01:22:06,399 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:22:06,400 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-05-24_01-22-06.log]
[testng] 01:22:06,401 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7504e0f0 - End of configuration.
[testng] [2024-05-24 01:22:06,425] [pool-1-thread-2] Initializing /data/venu/Kontrolle0005.lim:
[testng] 01:22:06,425 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 01:22:06,425 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:22:06,426 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-05-24_01-22-06.log]
[testng] 01:22:06,426 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3eadbc94 - End of configuration.
[testng] [2024-05-24 01:22:09,544] [pool-1-thread-9] Initializing /data/venu/Kontrolle0018.lim:
[testng] [2024-05-24 01:22:09,560] [pool-1-thread-10] Initializing /data/venu/Kontrolle0002.lim:
[testng] [2024-05-24 01:22:09,584] [pool-1-thread-3] Initializing /data/venu/Kontrolle0010.lim:
[testng] [2024-05-24 01:22:09,602] [pool-1-thread-4] Initializing /data/venu/Kontrolle0004.lim:
[testng] [2024-05-24 01:22:09,620] [pool-1-thread-7] Initializing /data/venu/Kontrolle0014.lim:
[testng] [2024-05-24 01:22:09,646] [pool-1-thread-8] Initializing /data/venu/Kontrolle0011.lim:
[testng] [2024-05-24 01:22:09,667] [pool-1-thread-11] Initializing /data/venu/Kontrolle0007.lim:
[testng] [2024-05-24 01:22:09,686] [pool-1-thread-2] Initializing /data/venu/Kontrolle0021.lim:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 1060, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 12 seconds
Finished: SUCCESS