Started by upstream project "BIOFORMATS-test-repo" build number 73
originally caused by:
Started by upstream project "Trigger" build number 81
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder
[BIOFORMATS-test-folder] $ /bin/bash -xe /tmp/jenkins4078353872429257003.sh
+ '[' targa = slidebook ']'
++ date +%u
+ '[' 5 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_10999_merge_ci -v /uod/idr/repos/curated/targa:/data -v /uod/idr-scratch/merge-ci/curated/targa:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 01:28:36,833 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 01:28:36,887 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 01:28:36,934 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 01:28:36,935 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 01:28:36,951 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 01:28:36,952 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 01:28:36,952 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 01:28:36,953 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 01:28:36,953 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5c30a9b0 - End of configuration.
[testng] 01:28:36,954 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@7a69b07 - Registering current configuration as safe fallback point
[testng] 01:28:36,955 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5e82df6a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 438 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-05-24 01:28:36,971] [main] java.version = 1.8.0_342
[testng] 01:28:36,976 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 01:28:36,976 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:37,027 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-05-24_01-28-36.log]
[testng] 01:28:37,030 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
[testng] [2024-05-24 01:28:37,032] [main] testng.directory = /data
[testng] [2024-05-24 01:28:37,032] [main] testng.configDirectory = /config
[testng] [2024-05-24 01:28:37,046] [main] testng.multiplier = 1.0
[testng] [2024-05-24 01:28:37,046] [main] testng.in-memory = false
[testng] [2024-05-24 01:28:37,046] [main] testng.allow-missing = false
[testng] [2024-05-24 01:28:37,046] [main] user.language = en
[testng] [2024-05-24 01:28:37,046] [main] user.country = ${user.country}
[testng] [2024-05-24 01:28:37,046] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2024-05-24 01:28:37,644] [main] ----------------------------------------
[testng] [2024-05-24 01:28:37,645] [main] Total files: 21
[testng] [2024-05-24 01:28:37,645] [main] Scan time: 0.597 s (28 ms/file)
[testng] [2024-05-24 01:28:37,645] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 21 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-05-24 01:28:39,220] [pool-1-thread-1] Initializing /data/samples/UTC16.TGA:
[testng] 01:28:39,221 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 01:28:39,221 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:39,223 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-05-24_01-28-39.log]
[testng] 01:28:39,223 |-INFO in ch.qos.logback.core.sift.SiftProcessor@95047b1 - End of configuration.
[testng] [2024-05-24 01:28:39,251] [pool-1-thread-12] Initializing /data/samples/UBW8.TGA:
[testng] 01:28:39,252 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 01:28:39,252 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:39,254 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-05-24_01-28-39.log]
[testng] 01:28:39,254 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5a06bfa4 - End of configuration.
[testng] [2024-05-24 01:28:39,307] [pool-1-thread-11] Initializing /data/samples/XING_T24.TGA:
[testng] 01:28:39,307 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 01:28:39,307 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:39,308 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-05-24_01-28-39.log]
[testng] 01:28:39,308 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2d6eb0ca - End of configuration.
[testng] [2024-05-24 01:28:39,318] [pool-1-thread-10] Initializing /data/samples/FLAG_T32.TGA:
[testng] 01:28:39,318 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 01:28:39,318 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:39,319 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-05-24_01-28-39.log]
[testng] 01:28:39,320 |-INFO in ch.qos.logback.core.sift.SiftProcessor@68d21947 - End of configuration.
[testng] [2024-05-24 01:28:39,331] [pool-1-thread-9] Initializing /data/samples/FLAG_B32.TGA:
[testng] 01:28:39,332 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 01:28:39,332 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:39,333 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-05-24_01-28-39.log]
[testng] 01:28:39,333 |-INFO in ch.qos.logback.core.sift.SiftProcessor@20ef646e - End of configuration.
[testng] [2024-05-24 01:28:39,345] [pool-1-thread-8] Initializing /data/samples/CTC24.TGA:
[testng] 01:28:39,345 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 01:28:39,345 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:39,346 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-05-24_01-28-39.log]
[testng] 01:28:39,346 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7f67addd - End of configuration.
[testng] [2024-05-24 01:28:39,356] [pool-1-thread-7] Initializing /data/samples/XING_B24.TGA:
[testng] 01:28:39,357 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 01:28:39,357 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:39,358 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-05-24_01-28-39.log]
[testng] 01:28:39,358 |-INFO in ch.qos.logback.core.sift.SiftProcessor@44fdbe23 - End of configuration.
[testng] [2024-05-24 01:28:39,369] [pool-1-thread-6] Initializing /data/samples/CTC16.TGA:
[testng] 01:28:39,370 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 01:28:39,370 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:39,371 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-05-24_01-28-39.log]
[testng] 01:28:39,371 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3a866d9d - End of configuration.
[testng] [2024-05-24 01:28:39,380] [pool-1-thread-5] Initializing /data/samples/FLAG_T16.TGA:
[testng] 01:28:39,381 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 01:28:39,381 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:39,382 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-05-24_01-28-39.log]
[testng] 01:28:39,382 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2e27396c - End of configuration.
[testng] [2024-05-24 01:28:39,393] [pool-1-thread-4] Initializing /data/samples/FLAG_B24.TGA:
[testng] 01:28:39,394 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 01:28:39,394 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:39,395 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-05-24_01-28-39.log]
[testng] 01:28:39,395 |-INFO in ch.qos.logback.core.sift.SiftProcessor@628228e1 - End of configuration.
[testng] [2024-05-24 01:28:39,403] [pool-1-thread-3] Initializing /data/samples/XING_T32.TGA:
[testng] 01:28:39,403 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 01:28:39,403 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:39,404 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-05-24_01-28-39.log]
[testng] 01:28:39,405 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3a1b7ccc - End of configuration.
[testng] [2024-05-24 01:28:39,413] [pool-1-thread-2] Initializing /data/samples/CBW8.TGA:
[testng] 01:28:39,413 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 01:28:39,413 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:39,414 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-05-24_01-28-39.log]
[testng] 01:28:39,414 |-INFO in ch.qos.logback.core.sift.SiftProcessor@72bd6fa6 - End of configuration.
[testng] [2024-05-24 01:28:41,205] [pool-1-thread-5] Initializing /data/samples/XING_B32.TGA:
[testng] [2024-05-24 01:28:41,219] [pool-1-thread-9] Initializing /data/samples/MARBLES.TGA:
[testng] [2024-05-24 01:28:41,237] [pool-1-thread-10] Initializing /data/samples/CCM8.TGA:
[testng] [2024-05-24 01:28:41,245] [pool-1-thread-1] Initializing /data/samples/XING_T16.TGA:
[testng] [2024-05-24 01:28:41,261] [pool-1-thread-8] Initializing /data/samples/UTC32.TGA:
[testng] [2024-05-24 01:28:41,291] [pool-1-thread-6] Initializing /data/samples/XING_B16.TGA:
[testng] [2024-05-24 01:28:41,304] [pool-1-thread-11] Initializing /data/samples/UCM8.TGA:
[testng] [2024-05-24 01:28:41,326] [pool-1-thread-3] Initializing /data/samples/UTC24.TGA:
[testng] [2024-05-24 01:28:41,354] [pool-1-thread-7] Initializing /data/samples/FLAG_B16.TGA:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 1113, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 10 seconds
Finished: SUCCESS