Started by upstream project "<a href='/jenkins/job/BIOFORMATS-test-repo/' class='jenkins-table__link model-link model-link--float'>BIOFORMATS-test-repo</a>" build number <a href='/jenkins/job/BIOFORMATS-test-repo/73' class='jenkins-table__link model-link model-link--float'>73</a>
originally caused by:
 Started by upstream project "<a href='/jenkins/job/Trigger/' class='jenkins-table__link model-link model-link--float'>Trigger</a>" build number <a href='/jenkins/job/Trigger/81' class='jenkins-table__link model-link model-link--float'>81</a>
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on <a href='/jenkins/computer/docker' class='jenkins-table__link model-link model-link--float'>docker</a> (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder
[BIOFORMATS-test-folder] $ /bin/bash -xe /tmp/jenkins3765331487749965498.sh
+ '[' metaxpress = slidebook ']'
++ date +%u
+ '[' 5 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_11001_merge_ci -v /uod/idr/repos/curated/metaxpress:/data -v /uod/idr-scratch/merge-ci/curated/metaxpress:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test

test-automated:
   [testng] File leak detector installed
   [testng] 01:28:46,951 |-INFO in ch.qos.logback.classic.util.ContextInitializer@6b4a4e18 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:28:46,952 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 01:28:46,952 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 01:28:46,952 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 01:28:47,286 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 01:28:47,286 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 01:28:47,318 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 01:28:47,318 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 01:28:47,329 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 01:28:47,329 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 01:28:47,329 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 01:28:47,330 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 01:28:47,330 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration.
   [testng] 01:28:47,331 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point
   [testng] 01:28:47,331 |-INFO in ch.qos.logback.classic.util.ContextInitializer@6b4a4e18 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 380 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-05-24 01:28:47,341] [main] java.version = 1.8.0_342
   [testng] 01:28:47,345 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 01:28:47,345 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:28:47,471 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-05-24_01-28-47.log]
   [testng] 01:28:47,473 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
   [testng] [2024-05-24 01:28:47,475] [main] testng.directory = /data
   [testng] [2024-05-24 01:28:47,475] [main] testng.configDirectory = /config
   [testng] [2024-05-24 01:28:47,488] [main] testng.multiplier = 1.0
   [testng] [2024-05-24 01:28:47,488] [main] testng.in-memory = false
   [testng] [2024-05-24 01:28:47,488] [main] testng.allow-missing = false
   [testng] [2024-05-24 01:28:47,488] [main] user.language = en
   [testng] [2024-05-24 01:28:47,488] [main] user.country = ${user.country}
   [testng] [2024-05-24 01:28:47,489] [main] Maximum heap size = 13653 MB
   [testng] Scanning for files...
   [testng] [2024-05-24 01:36:50,407] [main] ----------------------------------------
   [testng] [2024-05-24 01:36:50,407] [main] Total files: 1231
   [testng] [2024-05-24 01:36:50,408] [main] Scan time: 482.918 s (392 ms/file)
   [testng] [2024-05-24 01:36:50,408] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 10 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-05-24 01:41:28,759] [pool-1-thread-1] Initializing /data/public/idr0005/Primary_001/2011-04-19-plate-1.HTD: 
   [testng] 01:41:28,760 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 01:41:28,760 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:41:28,761 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-05-24_01-41-28.log]
   [testng] 01:41:28,761 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1791d3d6 - End of configuration.
   [testng] [2024-05-24 01:41:29,894] [pool-1-thread-10] Initializing /data/public/idr0008/Plate10_Actinome1/Act1_Plate10-SP-A8.HTD: 
   [testng] 01:41:29,894 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 01:41:29,894 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:41:29,895 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-05-24_01-41-29.log]
   [testng] 01:41:29,895 |-INFO in ch.qos.logback.core.sift.SiftProcessor@503e05b9 - End of configuration.
   [testng] [2024-05-24 01:41:38,705] [pool-1-thread-9] Initializing /data/public/idr0006/plate 11001_Plate_136/TimePoint_1/plate 11001.HTD: 
   [testng] 01:41:38,705 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 01:41:38,705 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:41:38,707 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-05-24_01-41-38.log]
   [testng] 01:41:38,707 |-INFO in ch.qos.logback.core.sift.SiftProcessor@53038aaf - End of configuration.
   [testng] [2024-05-24 01:41:57,414] [pool-1-thread-8] Initializing /data/qa-4207/NSC.HTD: 
   [testng] 01:41:57,414 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 01:41:57,414 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:41:57,415 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-05-24_01-41-57.log]
   [testng] 01:41:57,415 |-INFO in ch.qos.logback.core.sift.SiftProcessor@494e421d - End of configuration.
   [testng] [2024-05-24 01:41:57,874] [pool-1-thread-7] Initializing /data/samples/thumb-test/2011-04-19-plate-1.HTD: 
   [testng] 01:41:57,874 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 01:41:57,874 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:41:57,875 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-05-24_01-41-57.log]
   [testng] 01:41:57,875 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7cacb5a8 - End of configuration.
   [testng] [2024-05-24 01:41:59,003] [pool-1-thread-6] Initializing /data/samples/multi-channel-missing-corner/multi-channel.HTD: 
   [testng] 01:41:59,003 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 01:41:59,003 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:41:59,004 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-05-24_01-41-59.log]
   [testng] 01:41:59,004 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1ed37d55 - End of configuration.
   [testng] [2024-05-24 01:41:59,452] [pool-1-thread-5] Initializing /data/samples/multi-z/2011-04-19-plate-1.HTD: 
   [testng] 01:41:59,452 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 01:41:59,452 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:41:59,453 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-05-24_01-41-59.log]
   [testng] 01:41:59,453 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36bcaf6f - End of configuration.
   [testng] [2024-05-24 01:42:00,913] [pool-1-thread-4] Initializing /data/samples/single-site-test/single-site.HTD: 
   [testng] 01:42:00,913 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 01:42:00,913 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:42:00,914 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-05-24_01-42-00.log]
   [testng] 01:42:00,914 |-INFO in ch.qos.logback.core.sift.SiftProcessor@57d2121b - End of configuration.
   [testng] [2024-05-24 01:42:01,022] [pool-1-thread-3] Initializing /data/samples/multi-channel-test/multi-channel.HTD: 
   [testng] 01:42:01,022 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 01:42:01,022 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:42:01,022 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-05-24_01-42-01.log]
   [testng] 01:42:01,023 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6148dd81 - End of configuration.
   [testng] [2024-05-24 01:42:01,117] [pool-1-thread-2] Initializing /data/public/idr0081/BSF018292-1A/BSF018292-1A.HTD: 
   [testng] 01:42:01,117 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 01:42:01,117 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:42:01,118 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-05-24_01-42-01.log]
   [testng] 01:42:01,118 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7d4f1363 - End of configuration.
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 530, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 35 minutes 46 seconds
Finished: SUCCESS