Started by upstream project "BIOFORMATS-test-repo" build number 74
originally caused by:
 Started by upstream project "Trigger" build number 82
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder
[BIOFORMATS-test-folder] $ /bin/bash -xe /tmp/jenkins18242311445105807844.sh
+ '[' targa = slidebook ']'
++ date +%u
+ '[' 6 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_11163_merge_ci -v /uod/idr/repos/curated/targa:/data -v /uod/idr-scratch/merge-ci/curated/targa:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] WARNING: An illegal reflective access operation has occurred
   [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket
   [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener
   [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
   [testng] WARNING: All illegal access operations will be denied in a future release
   [testng] File leak detector installed
   [testng] 01:26:58,035 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 01:26:58,036 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - No custom configurators were discovered as a service.
   [testng] 01:26:58,036 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:26:58,037 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:26:58,038 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 01:26:58,038 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 01:26:58,039 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 01:26:58,039 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:26:58,039 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:26:58,040 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 01:26:58,040 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 01:26:58,040 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 01:26:58,223 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 01:26:58,223 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 01:26:58,247 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 01:26:58,247 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 01:26:58,252 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 01:26:58,252 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 01:26:58,252 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 01:26:58,253 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 01:26:58,253 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2794eab6 - End of configuration.
   [testng] 01:26:58,254 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6c1a5b54 - Registering current configuration as safe fallback point
   [testng] 01:26:58,254 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 215 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-05-25 01:26:58,263] [main] java.version = 11.0.16
   [testng] 01:26:58,266 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 01:26:58,266 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:26:58,308 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-05-25_01-26-58.log]
   [testng] 01:26:58,309 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642a7222 - End of configuration.
   [testng] [2024-05-25 01:26:58,311] [main] testng.directory = /data
   [testng] [2024-05-25 01:26:58,311] [main] testng.configDirectory = /config
   [testng] [2024-05-25 01:26:58,322] [main] testng.multiplier = 1.0
   [testng] [2024-05-25 01:26:58,323] [main] testng.in-memory = false
   [testng] [2024-05-25 01:26:58,323] [main] testng.allow-missing = false
   [testng] [2024-05-25 01:26:58,323] [main] user.language = en
   [testng] [2024-05-25 01:26:58,323] [main] user.country = ${user.country}
   [testng] [2024-05-25 01:26:58,323] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-05-25 01:26:58,685] [main] ----------------------------------------
   [testng] [2024-05-25 01:26:58,685] [main] Total files: 21
   [testng] [2024-05-25 01:26:58,686] [main] Scan time: 0.361 s (17 ms/file)
   [testng] [2024-05-25 01:26:58,686] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 21 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-05-25 01:26:59,499] [pool-1-thread-1] Initializing /data/samples/XING_B32.TGA: 
   [testng] 01:26:59,500 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 01:26:59,500 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:26:59,502 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-05-25_01-26-59.log]
   [testng] 01:26:59,502 |-INFO in ch.qos.logback.core.sift.SiftProcessor@70a055fd - End of configuration.
   [testng] [2024-05-25 01:26:59,523] [pool-1-thread-12] Initializing /data/samples/FLAG_B32.TGA: 
   [testng] 01:26:59,523 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 01:26:59,523 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:26:59,525 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-05-25_01-26-59.log]
   [testng] 01:26:59,525 |-INFO in ch.qos.logback.core.sift.SiftProcessor@48d85d55 - End of configuration.
   [testng] [2024-05-25 01:26:59,587] [pool-1-thread-11] Initializing /data/samples/XING_T32.TGA: 
   [testng] 01:26:59,587 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 01:26:59,587 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:26:59,589 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-05-25_01-26-59.log]
   [testng] 01:26:59,589 |-INFO in ch.qos.logback.core.sift.SiftProcessor@20763fa4 - End of configuration.
   [testng] [2024-05-25 01:26:59,604] [pool-1-thread-10] Initializing /data/samples/XING_T16.TGA: 
   [testng] 01:26:59,605 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 01:26:59,605 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:26:59,606 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-05-25_01-26-59.log]
   [testng] 01:26:59,606 |-INFO in ch.qos.logback.core.sift.SiftProcessor@289092e - End of configuration.
   [testng] [2024-05-25 01:26:59,619] [pool-1-thread-9] Initializing /data/samples/FLAG_T16.TGA: 
   [testng] 01:26:59,619 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 01:26:59,619 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:26:59,620 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-05-25_01-26-59.log]
   [testng] 01:26:59,620 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3a6c7db - End of configuration.
   [testng] [2024-05-25 01:26:59,629] [pool-1-thread-8] Initializing /data/samples/FLAG_B24.TGA: 
   [testng] 01:26:59,630 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 01:26:59,630 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:26:59,630 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-05-25_01-26-59.log]
   [testng] 01:26:59,631 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1a651a84 - End of configuration.
   [testng] [2024-05-25 01:26:59,643] [pool-1-thread-7] Initializing /data/samples/UTC16.TGA: 
   [testng] 01:26:59,644 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 01:26:59,644 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:26:59,645 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-05-25_01-26-59.log]
   [testng] 01:26:59,645 |-INFO in ch.qos.logback.core.sift.SiftProcessor@377627d - End of configuration.
   [testng] [2024-05-25 01:26:59,658] [pool-1-thread-6] Initializing /data/samples/UTC24.TGA: 
   [testng] 01:26:59,658 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 01:26:59,658 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:26:59,659 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-05-25_01-26-59.log]
   [testng] 01:26:59,660 |-INFO in ch.qos.logback.core.sift.SiftProcessor@58e746db - End of configuration.
   [testng] [2024-05-25 01:26:59,672] [pool-1-thread-5] Initializing /data/samples/MARBLES.TGA: 
   [testng] 01:26:59,673 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 01:26:59,673 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:26:59,673 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-05-25_01-26-59.log]
   [testng] 01:26:59,674 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2b6b30ba - End of configuration.
   [testng] [2024-05-25 01:26:59,690] [pool-1-thread-4] Initializing /data/samples/FLAG_B16.TGA: 
   [testng] 01:26:59,690 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 01:26:59,690 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:26:59,691 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-05-25_01-26-59.log]
   [testng] 01:26:59,691 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5cda5600 - End of configuration.
   [testng] [2024-05-25 01:26:59,702] [pool-1-thread-3] Initializing /data/samples/XING_B16.TGA: 
   [testng] 01:26:59,703 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 01:26:59,703 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:26:59,704 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-05-25_01-26-59.log]
   [testng] 01:26:59,704 |-INFO in ch.qos.logback.core.sift.SiftProcessor@f6fe0a5 - End of configuration.
   [testng] [2024-05-25 01:26:59,716] [pool-1-thread-2] Initializing /data/samples/UTC32.TGA: 
   [testng] 01:26:59,716 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 01:26:59,716 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:26:59,717 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-05-25_01-26-59.log]
   [testng] 01:26:59,717 |-INFO in ch.qos.logback.core.sift.SiftProcessor@47e7ebb0 - End of configuration.
   [testng] [2024-05-25 01:27:01,361] [pool-1-thread-6] Initializing /data/samples/XING_B24.TGA: 
   [testng] [2024-05-25 01:27:01,370] [pool-1-thread-8] Initializing /data/samples/UBW8.TGA: 
   [testng] [2024-05-25 01:27:01,377] [pool-1-thread-12] Initializing /data/samples/XING_T24.TGA: 
   [testng] [2024-05-25 01:27:01,385] [pool-1-thread-4] Initializing /data/samples/FLAG_T32.TGA: 
   [testng] [2024-05-25 01:27:01,393] [pool-1-thread-2] Initializing /data/samples/UCM8.TGA: 
   [testng] [2024-05-25 01:27:01,402] [pool-1-thread-11] Initializing /data/samples/CTC24.TGA: 
   [testng] [2024-05-25 01:27:01,412] [pool-1-thread-3] Initializing /data/samples/CTC16.TGA: 
   [testng] [2024-05-25 01:27:01,420] [pool-1-thread-10] Initializing /data/samples/CBW8.TGA: 
   [testng] [2024-05-25 01:27:01,427] [pool-1-thread-1] Initializing /data/samples/CCM8.TGA: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 1113, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 8 seconds
Finished: SUCCESS