![[Jenkins]](/jenkins/static/d8ca237c/images/svgs/logo.svg){kind=logo}
Started by upstream project "BIOFORMATS-test-repo" build number 8 originally caused by: Started by upstream project "Trigger" build number 11 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder [BIOFORMATS-test-folder] $ /bin/bash -xe /tmp/jenkins9651090948672677266.sh + '[' targa = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_1156_merge_ci -v /uod/idr/repos/curated/targa:/data -v /uod/idr-scratch/merge-ci/curated/targa:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 00:29:53,340 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 00:29:53,342 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service. [testng] 00:29:53,342 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:29:53,344 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:29:53,344 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:29:53,344 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:29:53,345 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:29:53,345 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:29:53,345 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:29:53,346 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:29:53,346 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:29:53,346 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:29:53,629 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:29:53,629 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:29:53,666 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:29:53,666 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:29:53,676 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:29:53,677 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:29:53,677 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:29:53,677 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:29:53,678 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration. [testng] 00:29:53,679 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point [testng] 00:29:53,679 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 334 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-03-22 00:29:53,692] [main] java.version = 1.8.0_342 [testng] 00:29:53,696 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:29:53,697 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:29:53,770 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-03-22_00-29-53.log] [testng] 00:29:53,774 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-03-22 00:29:53,777] [main] testng.directory = /data [testng] [2024-03-22 00:29:53,777] [main] testng.configDirectory = /config [testng] [2024-03-22 00:29:53,794] [main] testng.multiplier = 1.0 [testng] [2024-03-22 00:29:53,795] [main] testng.in-memory = false [testng] [2024-03-22 00:29:53,795] [main] testng.allow-missing = false [testng] [2024-03-22 00:29:53,795] [main] user.language = en [testng] [2024-03-22 00:29:53,795] [main] user.country = ${user.country} [testng] [2024-03-22 00:29:53,795] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-03-22 00:29:54,362] [main] ---------------------------------------- [testng] [2024-03-22 00:29:54,362] [main] Total files: 21 [testng] [2024-03-22 00:29:54,363] [main] Scan time: 0.566 s (26 ms/file) [testng] [2024-03-22 00:29:54,364] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 21 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-03-22 00:29:56,469] [pool-1-thread-1] Initializing /data/samples/UTC16.TGA: [testng] 00:29:56,469 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:29:56,469 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:29:56,470 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-03-22_00-29-56.log] [testng] 00:29:56,470 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1a3cab09 - End of configuration. [testng] [2024-03-22 00:29:56,494] [pool-1-thread-12] Initializing /data/samples/UBW8.TGA: [testng] 00:29:56,494 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:29:56,494 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:29:56,495 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-03-22_00-29-56.log] [testng] 00:29:56,496 |-INFO in ch.qos.logback.core.sift.SiftProcessor@52c2d503 - End of configuration. [testng] [2024-03-22 00:29:56,539] [pool-1-thread-11] Initializing /data/samples/XING_T24.TGA: [testng] 00:29:56,539 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:29:56,539 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:29:56,540 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-03-22_00-29-56.log] [testng] 00:29:56,541 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3579e632 - End of configuration. [testng] [2024-03-22 00:29:56,570] [pool-1-thread-10] Initializing /data/samples/FLAG_T32.TGA: [testng] 00:29:56,570 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:29:56,570 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:29:56,571 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-03-22_00-29-56.log] [testng] 00:29:56,571 |-INFO in ch.qos.logback.core.sift.SiftProcessor@72bd6fa6 - End of configuration. [testng] [2024-03-22 00:29:56,583] [pool-1-thread-9] Initializing /data/samples/FLAG_B32.TGA: [testng] 00:29:56,583 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:29:56,583 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:29:56,584 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-03-22_00-29-56.log] [testng] 00:29:56,584 |-INFO in ch.qos.logback.core.sift.SiftProcessor@331fe4f4 - End of configuration. [testng] [2024-03-22 00:29:56,597] [pool-1-thread-8] Initializing /data/samples/CTC24.TGA: [testng] 00:29:56,597 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:29:56,597 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:29:56,598 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-03-22_00-29-56.log] [testng] 00:29:56,598 |-INFO in ch.qos.logback.core.sift.SiftProcessor@191961cb - End of configuration. [testng] [2024-03-22 00:29:56,610] [pool-1-thread-7] Initializing /data/samples/XING_B24.TGA: [testng] 00:29:56,610 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:29:56,610 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:29:56,611 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-03-22_00-29-56.log] [testng] 00:29:56,611 |-INFO in ch.qos.logback.core.sift.SiftProcessor@334a510a - End of configuration. [testng] [2024-03-22 00:29:56,623] [pool-1-thread-6] Initializing /data/samples/CTC16.TGA: [testng] 00:29:56,623 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:29:56,623 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:29:56,624 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-03-22_00-29-56.log] [testng] 00:29:56,624 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2646bfd6 - End of configuration. [testng] [2024-03-22 00:29:56,635] [pool-1-thread-5] Initializing /data/samples/FLAG_T16.TGA: [testng] 00:29:56,635 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:29:56,635 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:29:56,636 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-03-22_00-29-56.log] [testng] 00:29:56,637 |-INFO in ch.qos.logback.core.sift.SiftProcessor@51a1729e - End of configuration. [testng] [2024-03-22 00:29:56,648] [pool-1-thread-4] Initializing /data/samples/FLAG_B24.TGA: [testng] 00:29:56,648 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:29:56,648 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:29:56,649 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-03-22_00-29-56.log] [testng] 00:29:56,649 |-INFO in ch.qos.logback.core.sift.SiftProcessor@75ed69c2 - End of configuration. [testng] [2024-03-22 00:29:56,660] [pool-1-thread-3] Initializing /data/samples/XING_T32.TGA: [testng] 00:29:56,660 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:29:56,660 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:29:56,661 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-03-22_00-29-56.log] [testng] 00:29:56,661 |-INFO in ch.qos.logback.core.sift.SiftProcessor@67e681e8 - End of configuration. [testng] [2024-03-22 00:29:56,672] [pool-1-thread-2] Initializing /data/samples/CBW8.TGA: [testng] 00:29:56,673 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:29:56,673 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:29:56,673 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-03-22_00-29-56.log] [testng] 00:29:56,674 |-INFO in ch.qos.logback.core.sift.SiftProcessor@50d6777f - End of configuration. [testng] [2024-03-22 00:29:58,299] [pool-1-thread-2] Initializing /data/samples/XING_B32.TGA: [testng] [2024-03-22 00:29:58,311] [pool-1-thread-9] Initializing /data/samples/MARBLES.TGA: [testng] [2024-03-22 00:29:58,327] [pool-1-thread-4] Initializing /data/samples/CCM8.TGA: [testng] [2024-03-22 00:29:58,337] [pool-1-thread-10] Initializing /data/samples/XING_T16.TGA: [testng] [2024-03-22 00:29:58,349] [pool-1-thread-5] Initializing /data/samples/UTC32.TGA: [testng] [2024-03-22 00:29:58,360] [pool-1-thread-8] Initializing /data/samples/XING_B16.TGA: [testng] [2024-03-22 00:29:58,372] [pool-1-thread-11] Initializing /data/samples/UCM8.TGA: [testng] [2024-03-22 00:29:58,382] [pool-1-thread-3] Initializing /data/samples/UTC24.TGA: [testng] [2024-03-22 00:29:58,394] [pool-1-thread-7] Initializing /data/samples/FLAG_B16.TGA: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 1113, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 9 seconds Finished: SUCCESS