Started by upstream project "BIOFORMATS-test-repo" build number 78
originally caused by:
 Started by upstream project "Trigger" build number 86
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@2
[BIOFORMATS-test-folder@2] $ /bin/bash -xe /tmp/jenkins7731564305264728697.sh
+ '[' imaris = slidebook ']'
++ date +%u
+ '[' 3 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_11898_merge_ci -v /uod/idr/repos/curated/imaris:/data -v /uod/idr-scratch/merge-ci/curated/imaris:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
   [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
   [testng] File leak detector installed
   [testng] 02:11:08,780 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 02:11:08,781 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service.
   [testng] 02:11:08,781 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 02:11:08,782 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 02:11:08,783 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 02:11:08,783 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 02:11:08,783 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 02:11:08,783 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 02:11:08,784 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 02:11:08,784 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 02:11:08,784 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 02:11:08,785 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 02:11:08,941 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 02:11:08,941 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 02:11:08,963 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 02:11:08,963 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 02:11:08,968 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 02:11:08,968 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 02:11:08,968 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 02:11:08,969 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 02:11:08,969 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration.
   [testng] 02:11:08,970 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point
   [testng] 02:11:08,970 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 186 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-05-29 02:11:08,978] [main] java.version = 17.0.2
   [testng] 02:11:08,981 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 02:11:08,982 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:11:09,021 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-05-29_02-11-08.log]
   [testng] 02:11:09,022 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration.
   [testng] [2024-05-29 02:11:09,024] [main] testng.directory = /data
   [testng] [2024-05-29 02:11:09,024] [main] testng.configDirectory = /config
   [testng] [2024-05-29 02:11:09,032] [main] testng.multiplier = 1.0
   [testng] [2024-05-29 02:11:09,033] [main] testng.in-memory = false
   [testng] [2024-05-29 02:11:09,033] [main] testng.allow-missing = false
   [testng] [2024-05-29 02:11:09,034] [main] user.language = en
   [testng] [2024-05-29 02:11:09,034] [main] user.country = ${user.country}
   [testng] [2024-05-29 02:11:09,034] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-05-29 02:11:16,462] [main] ----------------------------------------
   [testng] [2024-05-29 02:11:16,463] [main] Total files: 67
   [testng] [2024-05-29 02:11:16,463] [main] Scan time: 7.428 s (110 ms/file)
   [testng] [2024-05-29 02:11:16,463] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 59 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-05-29 02:11:39,173] [pool-1-thread-1] Initializing /data/generated/10-31_E_t0010.ims: 
   [testng] 02:11:39,173 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 02:11:39,173 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:11:39,175 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-05-29_02-11-39.log]
   [testng] 02:11:39,175 |-INFO in ch.qos.logback.core.sift.SiftProcessor@74bb55bc - End of configuration.
   [testng] [2024-05-29 02:11:39,197] [pool-1-thread-12] Initializing /data/generated/10-31_E_t0004.ims: 
   [testng] 02:11:39,197 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 02:11:39,197 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:11:39,198 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-05-29_02-11-39.log]
   [testng] 02:11:39,198 |-INFO in ch.qos.logback.core.sift.SiftProcessor@641d6105 - End of configuration.
   [testng] [2024-05-29 02:11:39,214] [pool-1-thread-11] Initializing /data/qa-8019/wrong_num_dimensions.ims: 
   [testng] 02:11:39,215 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 02:11:39,215 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:11:39,216 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-05-29_02-11-39.log]
   [testng] 02:11:39,216 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7499ddd - End of configuration.
   [testng] [2024-05-29 02:11:39,280] [pool-1-thread-10] Initializing /data/public/davemason/Convallaria_3C_10T_confocal.ims: 
   [testng] 02:11:39,280 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 02:11:39,280 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:11:39,281 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-05-29_02-11-39.log]
   [testng] 02:11:39,281 |-INFO in ch.qos.logback.core.sift.SiftProcessor@d846d5a - End of configuration.
   [testng] [2024-05-29 02:11:39,318] [pool-1-thread-9] Initializing /data/public/davemason/Convallaria_3C_3T_35Z_confocal.ims: 
   [testng] 02:11:39,318 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 02:11:39,319 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:11:39,319 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-05-29_02-11-39.log]
   [testng] 02:11:39,320 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7a626088 - End of configuration.
   [testng] [2024-05-29 02:11:39,347] [pool-1-thread-8] Initializing /data/public/davemason/TransFactors_2C_34Z_SRRF_IMS3.ims: 
   [testng] 02:11:39,347 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 02:11:39,347 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:11:39,348 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-05-29_02-11-39.log]
   [testng] 02:11:39,348 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3b94360b - End of configuration.
   [testng] [2024-05-29 02:11:39,372] [pool-1-thread-7] Initializing /data/qa-17839/Fusion _Stack.ims: 
   [testng] 02:11:39,372 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 02:11:39,372 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:11:39,373 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-05-29_02-11-39.log]
   [testng] 02:11:39,374 |-INFO in ch.qos.logback.core.sift.SiftProcessor@49c3782e - End of configuration.
   [testng] [2024-05-29 02:11:39,426] [pool-1-thread-6] Initializing /data/generated/10-31_E_t0014.ims: 
   [testng] 02:11:39,426 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 02:11:39,426 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:11:39,427 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-05-29_02-11-39.log]
   [testng] 02:11:39,428 |-INFO in ch.qos.logback.core.sift.SiftProcessor@62ddcf66 - End of configuration.
   [testng] [2024-05-29 02:11:39,440] [pool-1-thread-5] Initializing /data/jason/imaris_5_5_demoimages/PtK2Cell.ims: 
   [testng] 02:11:39,440 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 02:11:39,441 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:11:39,441 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-05-29_02-11-39.log]
   [testng] 02:11:39,442 |-INFO in ch.qos.logback.core.sift.SiftProcessor@56bed826 - End of configuration.
   [testng] [2024-05-29 02:11:39,468] [pool-1-thread-4] Initializing /data/jake/p75Cherry M2 010-3~B.ims: 
   [testng] 02:11:39,468 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 02:11:39,468 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:11:39,469 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-05-29_02-11-39.log]
   [testng] 02:11:39,470 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7e02a12a - End of configuration.
   [testng] [2024-05-29 02:11:39,511] [pool-1-thread-3] Initializing /data/qa-17515/Organoid=1.ims: 
   [testng] 02:11:39,511 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 02:11:39,511 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:11:39,512 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-05-29_02-11-39.log]
   [testng] 02:11:39,512 |-INFO in ch.qos.logback.core.sift.SiftProcessor@366c7914 - End of configuration.
   [testng] [2024-05-29 02:11:39,673] [pool-1-thread-2] Initializing /data/public/davemason/Convallaria_3C_3T_35Z_confocal_IMS3.ims: 
   [testng] 02:11:39,673 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 02:11:39,673 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:11:39,674 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-05-29_02-11-39.log]
   [testng] 02:11:39,675 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2ad60127 - End of configuration.

BUILD SUCCESSFUL
Total time: 1 minute 47 seconds
Finished: SUCCESS