Started by upstream project "BIOFORMATS-test-repo" build number 80
originally caused by:
Started by upstream project "Trigger" build number 88
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@4
[BIOFORMATS-test-folder@4] $ /bin/bash -xe /tmp/jenkins5206692836961859566.sh
+ '[' jpeg = slidebook ']'
++ date +%u
+ '[' 5 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_12142_merge_ci -v /uod/idr/repos/curated/jpeg:/data -v /uod/idr-scratch/merge-ci/curated/jpeg:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 01:28:11,400 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 01:28:11,434 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 01:28:11,465 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 01:28:11,465 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 01:28:11,473 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 01:28:11,474 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 01:28:11,474 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 01:28:11,474 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 01:28:11,474 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5c30a9b0 - End of configuration.
[testng] 01:28:11,475 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@7a69b07 - Registering current configuration as safe fallback point
[testng] 01:28:11,475 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5e82df6a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 655 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-05-31 01:28:11,486] [main] java.version = 1.8.0_342
[testng] 01:28:11,491 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 01:28:11,491 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:11,543 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-05-31_01-28-11.log]
[testng] 01:28:11,545 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
[testng] [2024-05-31 01:28:11,547] [main] testng.directory = /data
[testng] [2024-05-31 01:28:11,547] [main] testng.configDirectory = /config
[testng] [2024-05-31 01:28:11,560] [main] testng.multiplier = 1.0
[testng] [2024-05-31 01:28:11,560] [main] testng.in-memory = false
[testng] [2024-05-31 01:28:11,560] [main] testng.allow-missing = false
[testng] [2024-05-31 01:28:11,560] [main] user.language = en
[testng] [2024-05-31 01:28:11,560] [main] user.country = ${user.country}
[testng] [2024-05-31 01:28:11,560] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2024-05-31 01:28:11,980] [main] ----------------------------------------
[testng] [2024-05-31 01:28:11,980] [main] Total files: 12
[testng] [2024-05-31 01:28:11,980] [main] Scan time: 0.42 s (35 ms/file)
[testng] [2024-05-31 01:28:11,981] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 12 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-05-31 01:28:32,741] [pool-1-thread-1] Initializing /data/big-images/PB_9217_Retina_04 - 2010-07-16 19.04.48.ndpi.jpg:
[testng] 01:28:32,741 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 01:28:32,741 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:32,742 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-05-31_01-28-32.log]
[testng] 01:28:32,742 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36c1329b - End of configuration.
[testng] [2024-05-31 01:28:36,635] [pool-1-thread-12] Initializing /data/samples/Face.jpg:
[testng] 01:28:36,636 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 01:28:36,636 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:36,637 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-05-31_01-28-36.log]
[testng] 01:28:36,638 |-INFO in ch.qos.logback.core.sift.SiftProcessor@316c0133 - End of configuration.
[testng] [2024-05-31 01:28:36,647] [pool-1-thread-11] Initializing /data/samples/d170 170C +GAL-2006-0006_c6.JPG:
[testng] 01:28:36,647 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 01:28:36,647 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:36,648 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-05-31_01-28-36.log]
[testng] 01:28:36,648 |-INFO in ch.qos.logback.core.sift.SiftProcessor@38b05613 - End of configuration.
[testng] [2024-05-31 01:28:36,681] [pool-1-thread-10] Initializing /data/big-images/4kx4k.jpg:
[testng] 01:28:36,682 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 01:28:36,682 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:36,683 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-05-31_01-28-36.log]
[testng] 01:28:36,684 |-INFO in ch.qos.logback.core.sift.SiftProcessor@17ea9bcf - End of configuration.
[testng] [2024-05-31 01:28:37,508] [pool-1-thread-9] Initializing /data/big-images/2kx2k.jpg:
[testng] 01:28:37,508 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 01:28:37,508 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:37,509 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-05-31_01-28-37.log]
[testng] 01:28:37,509 |-INFO in ch.qos.logback.core.sift.SiftProcessor@60e64c5d - End of configuration.
[testng] [2024-05-31 01:28:37,755] [pool-1-thread-8] Initializing /data/big-images/8kx8k.jpg:
[testng] 01:28:37,755 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 01:28:37,755 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:37,756 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-05-31_01-28-37.log]
[testng] 01:28:37,757 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3239271 - End of configuration.
[testng] [2024-05-31 01:28:40,374] [pool-1-thread-7] Initializing /data/human-embryology-2018-01-04/CS17_N365_491_whole.jpg:
[testng] 01:28:40,374 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 01:28:40,374 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:40,375 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-05-31_01-28-40.log]
[testng] 01:28:40,376 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7a5884b - End of configuration.
[testng] [2024-05-31 01:28:45,191] [pool-1-thread-6] Initializing /data/samples/wall-e2.jpg:
[testng] 01:28:45,191 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 01:28:45,191 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:45,193 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-05-31_01-28-45.log]
[testng] 01:28:45,193 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36ad2ea0 - End of configuration.
[testng] [2024-05-31 01:28:45,219] [pool-1-thread-5] Initializing /data/darwinjob/T1_3_1_SST11D_0059.jpg:
[testng] 01:28:45,220 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 01:28:45,220 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:45,221 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-05-31_01-28-45.log]
[testng] 01:28:45,221 |-INFO in ch.qos.logback.core.sift.SiftProcessor@28e0a3d0 - End of configuration.
[testng] [2024-05-31 01:28:47,916] [pool-1-thread-4] Initializing /data/gh-4061/magick2x2.jpg:
[testng] 01:28:47,916 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 01:28:47,916 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:47,917 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-05-31_01-28-47.log]
[testng] 01:28:47,917 |-INFO in ch.qos.logback.core.sift.SiftProcessor@764d4c39 - End of configuration.
[testng] [2024-05-31 01:28:48,931] [pool-1-thread-3] Initializing /data/gh-4061/magick1x2.jpg:
[testng] 01:28:48,931 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 01:28:48,932 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:48,932 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-05-31_01-28-48.log]
[testng] 01:28:48,933 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13fcb011 - End of configuration.
[testng] [2024-05-31 01:28:50,139] [pool-1-thread-2] Initializing /data/gh-4061/magick2x1.jpg:
[testng] 01:28:50,139 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 01:28:50,139 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:50,140 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-05-31_01-28-50.log]
[testng] 01:28:50,140 |-INFO in ch.qos.logback.core.sift.SiftProcessor@ecfe770 - End of configuration.
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 636, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 1 minute 37 seconds
Finished: SUCCESS