Started by upstream project "BIOFORMATS-test-repo" build number 82
originally caused by:
Started by upstream project "Trigger" build number 92
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8
[BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins17551268283118125284.sh
+ '[' olympus-oir = slidebook ']'
++ date +%u
+ '[' 2 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_12448_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] WARNING: An illegal reflective access operation has occurred
[testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket
[testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener
[testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
[testng] WARNING: All illegal access operations will be denied in a future release
[testng] File leak detector installed
[testng] 01:19:20,012 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 01:19:20,014 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - No custom configurators were discovered as a service.
[testng] 01:19:20,014 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:19:20,016 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:19:20,017 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 01:19:20,017 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 01:19:20,018 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 01:19:20,018 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:19:20,018 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:19:20,019 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 01:19:20,020 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 01:19:20,020 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 01:19:20,270 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 01:19:20,271 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 01:19:20,296 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 01:19:20,296 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 01:19:20,303 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 01:19:20,303 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 01:19:20,303 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 01:19:20,303 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 01:19:20,303 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2794eab6 - End of configuration.
[testng] 01:19:20,304 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6c1a5b54 - Registering current configuration as safe fallback point
[testng] 01:19:20,304 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 286 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-06-04 01:19:20,315] [main] java.version = 11.0.16
[testng] 01:19:20,319 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 01:19:20,319 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:19:20,374 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-04_01-19-20.log]
[testng] 01:19:20,376 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642a7222 - End of configuration.
[testng] [2024-06-04 01:19:20,378] [main] testng.directory = /data
[testng] [2024-06-04 01:19:20,378] [main] testng.configDirectory = /config
[testng] [2024-06-04 01:19:20,389] [main] testng.multiplier = 1.0
[testng] [2024-06-04 01:19:20,391] [main] testng.in-memory = false
[testng] [2024-06-04 01:19:20,391] [main] testng.allow-missing = false
[testng] [2024-06-04 01:19:20,391] [main] user.language = en
[testng] [2024-06-04 01:19:20,391] [main] user.country = ${user.country}
[testng] [2024-06-04 01:19:20,391] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-06-04 01:19:35,623] [main] ----------------------------------------
[testng] [2024-06-04 01:19:35,623] [main] Total files: 283
[testng] [2024-06-04 01:19:35,623] [main] Scan time: 15.232 s (53 ms/file)
[testng] [2024-06-04 01:19:35,623] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 186 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-06-04 01:26:57,371] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir:
[testng] 01:26:57,372 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 01:26:57,373 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:26:57,376 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-04_01-26-57.log]
[testng] 01:26:57,376 |-INFO in ch.qos.logback.core.sift.SiftProcessor@20764267 - End of configuration.
[testng] [2024-06-04 01:26:57,912] [pool-1-thread-12] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.ome.tif:
[testng] 01:26:57,913 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 01:26:57,913 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:26:57,913 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-06-04_01-26-57.log]
[testng] 01:26:57,914 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3da28500 - End of configuration.
[testng] [2024-06-04 01:26:57,996] [pool-1-thread-11] Initializing /data/qa-16881/P10-50 D2_0019.oir:
[testng] 01:26:57,996 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 01:26:57,997 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:26:57,998 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-04_01-26-57.log]
[testng] 01:26:57,999 |-INFO in ch.qos.logback.core.sift.SiftProcessor@56fb092e - End of configuration.
[testng] [2024-06-04 01:26:58,223] [pool-1-thread-10] Initializing /data/qa-16881/P10D1 20150729.ome.tif:
[testng] 01:26:58,223 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 01:26:58,224 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:26:58,225 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-04_01-26-58.log]
[testng] 01:26:58,225 |-INFO in ch.qos.logback.core.sift.SiftProcessor@79aee009 - End of configuration.
[testng] [2024-06-04 01:26:58,336] [pool-1-thread-9] Initializing /data/olympus/_stitched 4x4 zstack 10X_XYZ_/stack1/frame_t_0.ets:
[testng] 01:26:58,336 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 01:26:58,336 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:26:58,337 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-04_01-26-58.log]
[testng] 01:26:58,338 |-INFO in ch.qos.logback.core.sift.SiftProcessor@453f3046 - End of configuration.
[testng] [2024-06-04 01:26:58,374] [pool-1-thread-8] Initializing /data/olympus/Clipboard-calcium sparks_XYt.tif:
[testng] 01:26:58,375 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 01:26:58,375 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:26:58,376 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-04_01-26-58.log]
[testng] 01:26:58,376 |-INFO in ch.qos.logback.core.sift.SiftProcessor@fa20c79 - End of configuration.
[testng] [2024-06-04 01:26:58,476] [pool-1-thread-7] Initializing /data/qa-16881/W11-180 D3 20151021_0024.oir:
[testng] 01:26:58,476 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 01:26:58,476 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:26:58,477 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-04_01-26-58.log]
[testng] 01:26:58,478 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3ca7e0f9 - End of configuration.
[testng] [2024-06-04 01:26:58,739] [pool-1-thread-6] Initializing /data/qa-17270/alexa488.ome.tif:
[testng] 01:26:58,739 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 01:26:58,739 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:26:58,740 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-04_01-26-58.log]
[testng] 01:26:58,741 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2c4d49f5 - End of configuration.
[testng] [2024-06-04 01:26:58,845] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif:
[testng] 01:26:58,845 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 01:26:58,845 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:26:58,846 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-04_01-26-58.log]
[testng] 01:26:58,846 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6bc2521a - End of configuration.
[testng] [2024-06-04 01:26:58,917] [pool-1-thread-4] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info:
[testng] 01:26:58,917 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 01:26:58,917 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:26:58,918 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-04_01-26-58.log]
[testng] 01:26:58,918 |-INFO in ch.qos.logback.core.sift.SiftProcessor@56761f6e - End of configuration.
[testng] [2024-06-04 01:27:01,956] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir:
[testng] 01:27:01,957 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 01:27:01,957 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:27:01,958 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-04_01-27-01.log]
[testng] 01:27:01,959 |-INFO in ch.qos.logback.core.sift.SiftProcessor@424a807d - End of configuration.
[testng] [2024-06-04 01:27:02,086] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif:
[testng] 01:27:02,086 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 01:27:02,087 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:27:02,088 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-04_01-27-02.log]
[testng] 01:27:02,088 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3c47e805 - End of configuration.
[testng] [2024-06-04 01:27:05,502] [pool-1-thread-5] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif:
[testng] [2024-06-04 01:27:05,568] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0024.tif:
[testng] [2024-06-04 01:27:05,700] [pool-1-thread-12] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir:
[testng] [2024-06-04 01:27:06,463] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-Caged Glu-3 point.tif:
[testng] [2024-06-04 01:27:06,542] [pool-1-thread-11] Initializing /data/public/etienne/venus stack.ome.tif:
[testng] [2024-06-04 01:27:06,754] [pool-1-thread-8] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir:
[testng] [2024-06-04 01:27:06,939] [pool-1-thread-2] Initializing /data/olympus/2017-04-20/mito_0006_0001.oir:
[testng] [2024-06-04 01:27:07,138] [pool-1-thread-3] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir:
[testng] [2024-06-04 01:27:07,564] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif:
[testng] [2024-06-04 01:27:07,876] [pool-1-thread-6] Initializing /data/public/etienne/amy slice z stack_0001.oir:
[testng] [2024-06-04 01:27:08,674] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir:
[testng] [2024-06-04 01:27:09,499] [pool-1-thread-2] Initializing /data/olympus/calcium sparks_XYt.ome.tif:
[testng] [2024-06-04 01:27:09,878] [pool-1-thread-10] Initializing /data/qa-17919/f10187.oir:
[testng] [2024-06-04 01:27:26,249] [pool-1-thread-7] Initializing /data/public/etienne/venus stack.oir:
[testng] [2024-06-04 01:27:26,882] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif:
[testng] [2024-06-04 01:27:26,997] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif:
[testng] [2024-06-04 01:27:27,087] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Clipboard-Image_0033_0001.tif:
[testng] [2024-06-04 01:27:27,511] [pool-1-thread-6] Initializing /data/qa-17331/60x zstack RS.oir:
[testng] [2024-06-04 01:27:27,897] [pool-1-thread-9] Initializing /data/qa-17331/60x zstack RS.ome.tif:
[testng] [2024-06-04 01:27:28,461] [pool-1-thread-12] Initializing /data/olympus/XYZt.vsi:
[testng] [2024-06-04 01:27:28,578] [pool-1-thread-1] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi:
[testng] [2024-06-04 01:27:28,999] [pool-1-thread-11] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi:
[testng] [2024-06-04 01:27:29,456] [pool-1-thread-5] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.oir:
[testng] [2024-06-04 01:27:29,927] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif:
[testng] [2024-06-04 01:27:30,010] [pool-1-thread-2] Initializing /data/qa-17270/stack1.oir:
[testng] [2024-06-04 01:27:31,559] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif:
[testng] [2024-06-04 01:27:31,801] [pool-1-thread-12] Initializing /data/qa-16881/P10D1 20150729.oir:
[testng] [2024-06-04 01:27:32,124] [pool-1-thread-7] Initializing /data/cudmore/20190401__0005.oir:
[testng] [2024-06-04 01:27:36,966] [pool-1-thread-9] Initializing /data/qa-16881/Clipboard-W4-0 D14 New 20150828_0007.tif:
[testng] [2024-06-04 01:27:37,382] [pool-1-thread-8] Initializing /data/qa-16881/W11-180 D3 20151021_0006.oir:
[testng] [2024-06-04 01:27:37,795] [pool-1-thread-6] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0001.tif:
[testng] [2024-06-04 01:27:38,300] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir:
[testng] [2024-06-04 01:27:38,577] [pool-1-thread-1] Initializing /data/qa-17270/stack1.ome.tif:
[testng] [2024-06-04 01:27:39,225] [pool-1-thread-11] Initializing /data/qa-17331/Clipboard.tif:
[testng] [2024-06-04 01:27:39,445] [pool-1-thread-9] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif:
[testng] [2024-06-04 01:27:39,519] [pool-1-thread-12] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir:
[testng] [2024-06-04 01:27:39,778] [pool-1-thread-5] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi:
[testng] [2024-06-04 01:27:39,953] [pool-1-thread-8] Initializing /data/qa-16881/W11-180 D3 20151021_0024.ome.tif:
[testng] [2024-06-04 01:27:40,426] [pool-1-thread-6] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif:
[testng] [2024-06-04 01:27:41,561] [pool-1-thread-11] Initializing /data/qa-16881/P10-50 D2.oir:
[testng] [2024-06-04 01:27:41,869] [pool-1-thread-9] Initializing /data/olympus/XYZt.ome.tif:
[testng] [2024-06-04 01:27:42,113] [pool-1-thread-1] Initializing /data/olympus/2021-04-20/overview 2 x_Cycle_01/matl.omp2info:
[testng] [2024-06-04 01:27:42,386] [pool-1-thread-8] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/matl.omp2info:
[testng] [2024-06-04 01:27:44,703] [pool-1-thread-5] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.ome.tif:
[testng] [2024-06-04 01:27:44,803] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.ome.tif:
[testng] [2024-06-04 01:27:45,587] [pool-1-thread-6] Initializing /data/olympus/XYZt.oir:
[testng] [2024-06-04 01:27:46,987] [pool-1-thread-12] Initializing /data/qa-17335/Clipboard-1.tif:
[testng] [2024-06-04 01:27:48,156] [pool-1-thread-5] Initializing /data/qa-16871/XY_0003.oir:
[testng] [2024-06-04 01:27:48,323] [pool-1-thread-11] Initializing /data/olympus/40X_4CH_XY.oir:
[testng] [2024-06-04 01:27:48,961] [pool-1-thread-2] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0019.tif:
[testng] [2024-06-04 01:27:49,032] [pool-1-thread-12] Initializing /data/qa-17270/alexa488.oir:
[testng] [2024-06-04 01:27:49,238] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.ome.tif:
[testng] [2024-06-04 01:27:49,369] [pool-1-thread-5] Initializing /data/qa-16881/Clipboard-P10-50 D2_0019.tif:
[testng] [2024-06-04 01:27:49,734] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-W1-135 D6 New 20150818_0010.tif:
[testng] [2024-06-04 01:27:49,906] [pool-1-thread-9] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.ome.tif:
[testng] [2024-06-04 01:27:50,834] [pool-1-thread-1] Initializing /data/qa-17270/image1.ome.tif:
[testng] [2024-06-04 01:27:50,962] [pool-1-thread-5] Initializing /data/olympus/_calcium sparks_XYt_/stack1/frame_t_0.ets:
[testng] [2024-06-04 01:27:51,051] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.oir:
[testng] [2024-06-04 01:27:51,415] [pool-1-thread-12] Initializing /data/qa-17335/1.ome.tif:
[testng] [2024-06-04 01:27:51,781] [pool-1-thread-9] Initializing /data/qa-16881/P10-50 D2.ome.tif:
[testng] [2024-06-04 01:27:51,852] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif:
[testng] [2024-06-04 01:27:52,000] [pool-1-thread-11] Initializing /data/olympus/2017-04-21/zebra shg.oir:
[testng] [2024-06-04 01:27:54,144] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.ome.tif:
[testng] [2024-06-04 01:27:54,431] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.oir:
[testng] [2024-06-04 01:27:54,537] [pool-1-thread-2] Initializing /data/qa-17335/OSR-Z.ome.tif:
[testng] [2024-06-04 01:27:54,861] [pool-1-thread-12] Initializing /data/qa-16881/P10D1 20150729_0024.ome.tif:
[testng] [2024-06-04 01:27:55,278] [pool-1-thread-3] Initializing /data/qa-16881/P10D1 20150729_0019.oir:
[testng] [2024-06-04 01:27:55,490] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.oir:
[testng] [2024-06-04 01:27:55,623] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif:
[testng] [2024-06-04 01:27:55,732] [pool-1-thread-5] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif:
[testng] [2024-06-04 01:27:56,398] [pool-1-thread-2] Initializing /data/qa-17270/Clipboard-stack1.tif:
[testng] [2024-06-04 01:27:56,815] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-W1-75 D11 New 20150825_0004.tif:
[testng] [2024-06-04 01:27:56,886] [pool-1-thread-9] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir:
[testng] [2024-06-04 01:27:57,018] [pool-1-thread-1] Initializing /data/olympus/Clipboard-40X_4CH_XY.tif:
[testng] [2024-06-04 01:27:57,457] [pool-1-thread-5] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.oir:
[testng] [2024-06-04 01:27:58,155] [pool-1-thread-3] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif:
[testng] [2024-06-04 01:27:58,354] [pool-1-thread-6] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir:
[testng] [2024-06-04 01:27:58,827] [pool-1-thread-2] Initializing /data/olympus/2017-11-20/xytz_golgi/xytz_golgi.oir:
[testng] [2024-06-04 01:28:00,475] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Clipboard-Image_0001_0001.tif:
[testng] [2024-06-04 01:28:00,686] [pool-1-thread-12] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir:
[testng] [2024-06-04 01:28:01,395] [pool-1-thread-3] Initializing /data/qa-17409/Stitch_A01_G001-exported.ome.tif:
[testng] [2024-06-04 01:28:01,886] [pool-1-thread-6] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir:
[testng] [2024-06-04 01:28:05,942] [pool-1-thread-9] Initializing /data/qa-16881/Clipboard-P10-50 D2_0006.tif:
[testng] [2024-06-04 01:28:05,998] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Clipboard-Image_0091_0001.tif:
[testng] [2024-06-04 01:28:06,157] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Clipboard-Image_0079_0001.tif:
[testng] [2024-06-04 01:28:07,311] [pool-1-thread-5] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.oir:
[testng] [2024-06-04 01:28:07,568] [pool-1-thread-9] Initializing /data/qa-16881/P10D1 20150729_0019.ome.tif:
[testng] [2024-06-04 01:28:07,664] [pool-1-thread-12] Initializing /data/qa-17270/image1.oir:
[testng] [2024-06-04 01:28:07,729] [pool-1-thread-1] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/image_Cycle_02.oir:
[testng] [2024-06-04 01:28:08,621] [pool-1-thread-12] Initializing /data/qa-16881/P10-50 D2_0019.ome.tif:
[testng] [2024-06-04 01:28:08,974] [pool-1-thread-5] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-LILY POLLEN.tif:
[testng] [2024-06-04 01:28:09,373] [pool-1-thread-9] Initializing /data/olympus/calcium sparks_XYt.oir:
[testng] [2024-06-04 01:28:09,900] [pool-1-thread-3] Initializing /data/olympus/Stitched_XYZ.ome.tif:
[testng] [2024-06-04 01:28:10,418] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.oir:
[testng] [2024-06-04 01:28:11,049] [pool-1-thread-7] Initializing /data/public/etienne/Clipboard-venus stack.tif:
[testng] [2024-06-04 01:28:11,384] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0024.tif:
[testng] [2024-06-04 01:28:11,706] [pool-1-thread-5] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/matl.omp2info:
[testng] [2024-06-04 01:28:14,227] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.oir:
[testng] [2024-06-04 01:28:14,450] [pool-1-thread-2] Initializing /data/martin/20170824_JupGFP_HisRFP_wL3_30xSI_4xzoom_0p5z_A01_G001_0001.oir:
[testng] [2024-06-04 01:29:02,559] [pool-1-thread-1] Initializing /data/qa-17222/ps245 red tubulin green 60x-1.oir.vsi:
[testng] [2024-06-04 01:29:03,764] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.oir:
[testng] [2024-06-04 01:29:04,037] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Clipboard-Image_0050_0001.tif:
[testng] [2024-06-04 01:29:04,670] [pool-1-thread-11] Initializing /data/qa-17335/Clipboard-stimulation_0001_LSM.tif:
[testng] [2024-06-04 01:29:04,779] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-PA-GFPv-2.tif:
[testng] [2024-06-04 01:29:04,900] [pool-1-thread-7] Initializing /data/qa-17922/example_multipart.oir:
[testng] [2024-06-04 01:29:23,912] [pool-1-thread-9] Initializing /data/olympus/Stitched_XYZ.vsi:
[testng] [2024-06-04 01:29:24,172] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.ome.tif:
[testng] [2024-06-04 01:29:24,887] [pool-1-thread-12] Initializing /data/olympus/Clipboard-stitched 4x4 zstack 10X_XYZ.tif:
[testng] [2024-06-04 01:29:25,203] [pool-1-thread-11] Initializing /data/qa-16881/P10-50 D2_0006.ome.tif:
[testng] [2024-06-04 01:29:25,313] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.ome.tif:
[testng] [2024-06-04 01:29:25,391] [pool-1-thread-1] Initializing /data/qa-16881/P10D1 20150729_0024.oir:
[testng] [2024-06-04 01:29:25,651] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.oir:
[testng] [2024-06-04 01:29:26,610] [pool-1-thread-9] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z_CONTROL.oir:
[testng] [2024-06-04 01:29:26,955] [pool-1-thread-12] Initializing /data/qa-17335/stimulation_0001_LSM.oir:
[testng] [2024-06-04 01:29:27,298] [pool-1-thread-4] Initializing /data/olympus/40X_4CH_XY.ome.tif:
[testng] [2024-06-04 01:29:27,649] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Clipboard-Image_0099_0001.tif:
[testng] [2024-06-04 01:29:27,730] [pool-1-thread-11] Initializing /data/qa-17917/f10010.oir:
[testng] [2024-06-04 01:29:53,481] [pool-1-thread-3] Initializing /data/qa-21508/Stitch_A01_G008.oir:
[testng] [2024-06-04 01:29:54,644] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.oir:
[testng] [2024-06-04 01:29:55,097] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif:
[testng] [2024-06-04 01:29:55,494] [pool-1-thread-9] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif:
[testng] [2024-06-04 01:29:55,973] [pool-1-thread-1] Initializing /data/olympus/calcium sparks.jpg:
[testng] [2024-06-04 01:29:56,576] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/Clipboard.tif:
[testng] [2024-06-04 01:29:56,903] [pool-1-thread-9] Initializing /data/olympus/Stitched_XYZ.oir:
[testng] [2024-06-04 01:29:57,322] [pool-1-thread-4] Initializing /data/public/etienne/coupe shg stack_0001.ome.tif:
[testng] [2024-06-04 01:29:58,302] [pool-1-thread-12] Initializing /data/qa-17293/2-z-t_0001_LSM.oir:
[testng] [2024-06-04 01:29:59,066] [pool-1-thread-4] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir:
[testng] [2024-06-04 01:29:59,722] [pool-1-thread-1] Initializing /data/qa-16871/Clipboard.tif:
[testng] [2024-06-04 01:29:59,897] [pool-1-thread-12] Initializing /data/qa-17409/Clipboard.tif:
[testng] [2024-06-04 01:30:00,511] [pool-1-thread-9] Initializing /data/qa-17409/Stitch_A01_G001.oir:
[testng] [2024-06-04 01:30:01,415] [pool-1-thread-1] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png:
[testng] [2024-06-04 01:30:01,609] [pool-1-thread-12] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif:
[testng] [2024-06-04 01:30:01,846] [pool-1-thread-1] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir:
[testng] [2024-06-04 01:30:03,329] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif:
[testng] [2024-06-04 01:30:03,629] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-P10D1 20150729.tif:
[testng] [2024-06-04 01:30:04,467] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif:
[testng] [2024-06-04 01:30:04,899] [pool-1-thread-12] Initializing /data/qa-17335/OSR-Z.oir:
[testng] [2024-06-04 01:30:05,580] [pool-1-thread-6] Initializing /data/qa-17270/Clipboard-image1.tif:
[testng] [2024-06-04 01:30:05,625] [pool-1-thread-9] Initializing /data/qa-17293/Clipboard.tif:
[testng] [2024-06-04 01:30:05,763] [pool-1-thread-8] Initializing /data/qa-18802/20171020_JupGFPHisRFP_L3_30xSI_galvo_p5z_p1xy_better_than_nyquist.oir:
[testng] [2024-06-04 01:30:06,697] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir:
[testng] [2024-06-04 01:30:06,888] [pool-1-thread-12] Initializing /data/public/etienne/coupe shg stack_0001.oir:
[testng] [2024-06-04 01:30:07,582] [pool-1-thread-4] Initializing /data/qa-17335/1.oir:
[testng] [2024-06-04 01:30:07,680] [pool-1-thread-1] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.oir:
[testng] [2024-06-04 01:30:08,115] [pool-1-thread-9] Initializing /data/qa-16881/P10-50 D2_0006.oir:
[testng] [2024-06-04 01:30:08,254] [pool-1-thread-6] Initializing /data/qa-17293/2-z-t_0001_LSM.ome.tif:
[testng] [2024-06-04 01:30:08,694] [pool-1-thread-4] Initializing /data/olympus/40X_4CH_XY.vsi:
[testng] [2024-06-04 01:30:09,012] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.ome.tif:
[testng] [2024-06-04 01:30:09,613] [pool-1-thread-9] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif:
[testng] [2024-06-04 01:30:09,691] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.oir:
[testng] [2024-06-04 01:30:10,077] [pool-1-thread-1] Initializing /data/olympus/Clipboard-XYZt.tif:
[testng] [2024-06-04 01:30:10,550] [pool-1-thread-12] Initializing /data/qa-16871/XY_0003.ome.tif:
[testng] [2024-06-04 01:30:10,739] [pool-1-thread-6] Initializing /data/qa-17270/Clipboard-alexa488.tif:
[testng] [2024-06-04 01:30:11,056] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif:
[testng] [2024-06-04 01:30:11,489] [pool-1-thread-1] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif:
[testng] [2024-06-04 01:30:11,707] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-P10-50 D2.tif:
[testng] [2024-06-04 01:30:12,114] [pool-1-thread-6] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir:
[testng] [2024-06-04 01:30:12,548] [pool-1-thread-4] Initializing /data/olympus/spectral_scan_XYL.ome.tif:
[testng] [2024-06-04 01:30:12,907] [pool-1-thread-1] Initializing /data/olympus/2017-04-20/Clipboard.tif:
[testng] [2024-06-04 01:30:13,218] [pool-1-thread-12] Initializing /data/olympus/2017-04-20/mito_0006_0001.ome.tif:
[testng] [2024-06-04 01:30:14,106] [pool-1-thread-4] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif:
[testng] [2024-06-04 01:30:14,185] [pool-1-thread-9] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir:
[testng] [2024-06-04 01:30:14,581] [pool-1-thread-12] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif:
[testng] [2024-06-04 01:30:14,651] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif:
[testng] [2024-06-04 01:30:15,737] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif:
[testng] [2024-06-04 01:30:16,138] [pool-1-thread-12] Initializing /data/qa-17335/Clipboard-OSR-Z.tif:
[testng] [2024-06-04 01:30:16,694] [pool-1-thread-1] Initializing /data/public/etienne/amy slice z stack_0001.ome.tif:
[testng] [2024-06-04 01:30:16,764] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.ome.tif:
[testng] [2024-06-04 01:30:16,858] [pool-1-thread-8] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir:
[testng] [2024-06-04 01:30:17,015] [pool-1-thread-9] Initializing /data/olympus/2017-11-20/fish_overview/fish-overview-night.oir:
[testng] [2024-06-04 01:30:21,758] [pool-1-thread-5] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif:
[testng] [2024-06-04 01:30:22,188] [pool-1-thread-12] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif:
[testng] [2024-06-04 01:30:22,779] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif:
[testng] [2024-06-04 01:30:22,875] [pool-1-thread-8] Initializing /data/olympus/spectral_scan_XYL.oir:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 9858, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 42 minutes 10 seconds
Finished: SUCCESS