Started by upstream project "BIOFORMATS-test-repo" build number 82
originally caused by:
 Started by upstream project "Trigger" build number 92
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder
[BIOFORMATS-test-folder] $ /bin/bash -xe /tmp/jenkins17680372091663872032.sh
+ '[' canon = slidebook ']'
++ date +%u
+ '[' 2 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_12481_merge_ci -v /uod/idr/repos/curated/canon:/data -v /uod/idr-scratch/merge-ci/curated/canon:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] WARNING: An illegal reflective access operation has occurred
   [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket
   [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener
   [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
   [testng] WARNING: All illegal access operations will be denied in a future release
   [testng] File leak detector installed
   [testng] 01:26:46,772 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 01:26:46,774 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - No custom configurators were discovered as a service.
   [testng] 01:26:46,774 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:26:46,776 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:26:46,776 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 01:26:46,777 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 01:26:46,777 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 01:26:46,777 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:26:46,778 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:26:46,779 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 01:26:46,779 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 01:26:46,779 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 01:26:46,959 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 01:26:46,959 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 01:26:46,981 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 01:26:46,981 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 01:26:46,986 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 01:26:46,986 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 01:26:46,986 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 01:26:46,987 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 01:26:46,987 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2794eab6 - End of configuration.
   [testng] 01:26:46,988 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6c1a5b54 - Registering current configuration as safe fallback point
   [testng] 01:26:46,988 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 210 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-06-04 01:26:46,997] [main] java.version = 11.0.16
   [testng] 01:26:47,000 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 01:26:47,000 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:26:47,041 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-04_01-26-47.log]
   [testng] 01:26:47,043 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642a7222 - End of configuration.
   [testng] [2024-06-04 01:26:47,045] [main] testng.directory = /data
   [testng] [2024-06-04 01:26:47,045] [main] testng.configDirectory = /config
   [testng] [2024-06-04 01:26:47,055] [main] testng.multiplier = 1.0
   [testng] [2024-06-04 01:26:47,056] [main] testng.in-memory = false
   [testng] [2024-06-04 01:26:47,056] [main] testng.allow-missing = false
   [testng] [2024-06-04 01:26:47,056] [main] user.language = en
   [testng] [2024-06-04 01:26:47,056] [main] user.country = ${user.country}
   [testng] [2024-06-04 01:26:47,056] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-06-04 01:26:48,467] [main] ----------------------------------------
   [testng] [2024-06-04 01:26:48,467] [main] Total files: 13
   [testng] [2024-06-04 01:26:48,467] [main] Scan time: 1.411 s (108 ms/file)
   [testng] [2024-06-04 01:26:48,467] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 13 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-06-04 01:26:52,938] [pool-1-thread-1] Initializing /data/pete/Learning to Fly.JPG: 
   [testng] 01:26:52,938 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 01:26:52,939 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:26:52,940 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-04_01-26-52.log]
   [testng] 01:26:52,941 |-INFO in ch.qos.logback.core.sift.SiftProcessor@fdd2e29 - End of configuration.
   [testng] [2024-06-04 01:26:53,277] [pool-1-thread-12] Initializing /data/pete/DNG-JPG.JPG: 
   [testng] 01:26:53,278 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 01:26:53,278 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:26:53,290 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-06-04_01-26-53.log]
   [testng] 01:26:53,291 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4ecddefa - End of configuration.
   [testng] [2024-06-04 01:26:53,360] [pool-1-thread-11] Initializing /data/kinor/2013_03_08_0808.CR2: 
   [testng] 01:26:53,360 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 01:26:53,360 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:26:53,361 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-04_01-26-53.log]
   [testng] 01:26:53,362 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3f06ac30 - End of configuration.
   [testng] [2024-06-04 01:26:53,588] [pool-1-thread-10] Initializing /data/pete/Raw-THM.THM: 
   [testng] 01:26:53,588 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 01:26:53,589 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:26:53,590 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-04_01-26-53.log]
   [testng] 01:26:53,590 |-INFO in ch.qos.logback.core.sift.SiftProcessor@67628b32 - End of configuration.
   [testng] [2024-06-04 01:26:53,801] [pool-1-thread-9] Initializing /data/pete/DNG-THM.THM: 
   [testng] 01:26:53,841 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 01:26:53,841 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:26:53,884 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-04_01-26-53.log]
   [testng] 01:26:53,884 |-INFO in ch.qos.logback.core.sift.SiftProcessor@de3f435 - End of configuration.
   [testng] [2024-06-04 01:26:53,928] [pool-1-thread-8] Initializing /data/pete/DNG-CR2.CR2: 
   [testng] 01:26:53,928 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 01:26:53,928 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:26:53,929 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-04_01-26-53.log]
   [testng] 01:26:53,930 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5efce57a - End of configuration.
   [testng] [2024-06-04 01:26:54,016] [pool-1-thread-7] Initializing /data/pete/Raw-JPG.JPG: 
   [testng] 01:26:54,017 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 01:26:54,017 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:26:54,061 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-04_01-26-54.log]
   [testng] 01:26:54,062 |-INFO in ch.qos.logback.core.sift.SiftProcessor@11be2ec0 - End of configuration.
   [testng] [2024-06-04 01:26:54,513] [pool-1-thread-6] Initializing /data/pete/Raw-CRW.CRW: 
   [testng] 01:26:54,513 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 01:26:54,513 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:26:54,514 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-04_01-26-54.log]
   [testng] 01:26:54,514 |-INFO in ch.qos.logback.core.sift.SiftProcessor@30bea65c - End of configuration.
   [testng] [2024-06-04 01:26:55,079] [pool-1-thread-5] Initializing /data/pete/DNG-CRW.CRW: 
   [testng] 01:26:55,079 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 01:26:55,080 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:26:55,080 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-04_01-26-55.log]
   [testng] 01:26:55,081 |-INFO in ch.qos.logback.core.sift.SiftProcessor@29712fc6 - End of configuration.
   [testng] [2024-06-04 01:26:55,152] [pool-1-thread-4] Initializing /data/cls/_N5Y0001.CR2: 
   [testng] 01:26:55,152 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 01:26:55,152 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:26:55,153 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-04_01-26-55.log]
   [testng] 01:26:55,153 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3cd74fe7 - End of configuration.
   [testng] [2024-06-04 01:26:55,226] [pool-1-thread-3] Initializing /data/pete/Raw-CR2.CR2: 
   [testng] 01:26:55,226 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 01:26:55,226 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:26:55,227 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-04_01-26-55.log]
   [testng] 01:26:55,228 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6a7e6039 - End of configuration.
   [testng] [2024-06-04 01:26:55,548] [pool-1-thread-2] Initializing /data/pete/DNG-WAV.WAV: 
   [testng] 01:26:55,548 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 01:26:55,548 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:26:55,549 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-04_01-26-55.log]
   [testng] 01:26:55,550 |-INFO in ch.qos.logback.core.sift.SiftProcessor@18ec7a95 - End of configuration.
   [testng] [2024-06-04 01:27:03,019] [pool-1-thread-4] Initializing /data/pete/Raw-WAV.WAV: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 689, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 33 seconds
Finished: SUCCESS