Started by upstream project "BIOFORMATS-test-repo" build number 83
originally caused by:
 Started by upstream project "Trigger" build number 93
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@4
[BIOFORMATS-test-folder@4] $ /bin/bash -xe /tmp/jenkins11540631688875277960.sh
+ '[' bmp = slidebook ']'
++ date +%u
+ '[' 3 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_12626_merge_ci -v /uod/idr/repos/curated/bmp:/data -v /uod/idr-scratch/merge-ci/curated/bmp:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
   [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
   [testng] File leak detector installed
   [testng] 01:23:07,797 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 01:23:07,798 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service.
   [testng] 01:23:07,798 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:23:07,799 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:23:07,800 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 01:23:07,800 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 01:23:07,801 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 01:23:07,801 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:23:07,801 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:23:07,802 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 01:23:07,802 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 01:23:07,802 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 01:23:07,971 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 01:23:07,971 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 01:23:07,995 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 01:23:07,995 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 01:23:08,001 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 01:23:08,001 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 01:23:08,001 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 01:23:08,001 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 01:23:08,001 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration.
   [testng] 01:23:08,002 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point
   [testng] 01:23:08,002 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 201 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-06-05 01:23:08,012] [main] java.version = 17.0.2
   [testng] 01:23:08,015 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 01:23:08,015 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:23:08,057 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-05_01-23-08.log]
   [testng] 01:23:08,059 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration.
   [testng] [2024-06-05 01:23:08,061] [main] testng.directory = /data
   [testng] [2024-06-05 01:23:08,061] [main] testng.configDirectory = /config
   [testng] [2024-06-05 01:23:08,070] [main] testng.multiplier = 1.0
   [testng] [2024-06-05 01:23:08,071] [main] testng.in-memory = false
   [testng] [2024-06-05 01:23:08,071] [main] testng.allow-missing = false
   [testng] [2024-06-05 01:23:08,071] [main] user.language = en
   [testng] [2024-06-05 01:23:08,071] [main] user.country = ${user.country}
   [testng] [2024-06-05 01:23:08,071] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-06-05 01:23:08,503] [main] ----------------------------------------
   [testng] [2024-06-05 01:23:08,503] [main] Total files: 31
   [testng] [2024-06-05 01:23:08,503] [main] Scan time: 0.432 s (13 ms/file)
   [testng] [2024-06-05 01:23:08,503] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 31 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-06-05 01:23:10,037] [pool-1-thread-1] Initializing /data/bk/ch_00.bmp: 
   [testng] 01:23:10,038 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 01:23:10,038 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:23:10,040 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-05_01-23-10.log]
   [testng] 01:23:10,040 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2abad664 - End of configuration.
   [testng] [2024-06-05 01:23:10,056] [pool-1-thread-12] Initializing /data/big-images/6kx6k.bmp: 
   [testng] 01:23:10,056 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 01:23:10,056 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:23:10,057 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-06-05_01-23-10.log]
   [testng] 01:23:10,058 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4fa7b410 - End of configuration.
   [testng] [2024-06-05 01:23:10,117] [pool-1-thread-11] Initializing /data/ticket-12971/foo.bmp: 
   [testng] 01:23:10,117 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 01:23:10,117 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:23:10,118 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-05_01-23-10.log]
   [testng] 01:23:10,119 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4578b14a - End of configuration.
   [testng] [2024-06-05 01:23:10,125] [pool-1-thread-10] Initializing /data/dennis/kidney_TFl_Three.bmp: 
   [testng] 01:23:10,125 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 01:23:10,125 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:23:10,126 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-05_01-23-10.log]
   [testng] 01:23:10,127 |-INFO in ch.qos.logback.core.sift.SiftProcessor@552a98e8 - End of configuration.
   [testng] [2024-06-05 01:23:10,134] [pool-1-thread-9] Initializing /data/brian/images/raw_a.bmp: 
   [testng] 01:23:10,134 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 01:23:10,134 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:23:10,135 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-05_01-23-10.log]
   [testng] 01:23:10,135 |-INFO in ch.qos.logback.core.sift.SiftProcessor@98fffe3 - End of configuration.
   [testng] [2024-06-05 01:23:10,147] [pool-1-thread-8] Initializing /data/brian/images/23srp5dksub.bmp: 
   [testng] 01:23:10,147 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 01:23:10,147 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:23:10,148 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-05_01-23-10.log]
   [testng] 01:23:10,149 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1d31d19f - End of configuration.
   [testng] [2024-06-05 01:23:10,168] [pool-1-thread-7] Initializing /data/qa-4538/22577136_Figure 2_A_ATF6 (GST)_13572.bmp: 
   [testng] 01:23:10,169 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 01:23:10,169 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:23:10,170 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-05_01-23-10.log]
   [testng] 01:23:10,170 |-INFO in ch.qos.logback.core.sift.SiftProcessor@62823acf - End of configuration.
   [testng] [2024-06-05 01:23:10,183] [pool-1-thread-6] Initializing /data/dennis/kidney_TFl_Two.bmp: 
   [testng] 01:23:10,184 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 01:23:10,184 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:23:10,184 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-05_01-23-10.log]
   [testng] 01:23:10,185 |-INFO in ch.qos.logback.core.sift.SiftProcessor@74b2f251 - End of configuration.
   [testng] [2024-06-05 01:23:10,194] [pool-1-thread-5] Initializing /data/curtis/image1.bmp: 
   [testng] 01:23:10,194 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 01:23:10,194 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:23:10,195 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-05_01-23-10.log]
   [testng] 01:23:10,195 |-INFO in ch.qos.logback.core.sift.SiftProcessor@d608af5 - End of configuration.
   [testng] [2024-06-05 01:23:10,201] [pool-1-thread-4] Initializing /data/big-images/8kx8k-grey.bmp: 
   [testng] 01:23:10,201 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 01:23:10,201 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:23:10,202 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-05_01-23-10.log]
   [testng] 01:23:10,202 |-INFO in ch.qos.logback.core.sift.SiftProcessor@8993ec1 - End of configuration.
   [testng] [2024-06-05 01:23:10,211] [pool-1-thread-3] Initializing /data/dennis/kidney_TFl_Seven.bmp: 
   [testng] 01:23:10,212 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 01:23:10,212 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:23:10,213 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-05_01-23-10.log]
   [testng] 01:23:10,213 |-INFO in ch.qos.logback.core.sift.SiftProcessor@25f195f1 - End of configuration.
   [testng] [2024-06-05 01:23:10,220] [pool-1-thread-2] Initializing /data/dennis/kidney_TFl_Four.bmp: 
   [testng] 01:23:10,221 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 01:23:10,221 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:23:10,222 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-05_01-23-10.log]
   [testng] 01:23:10,223 |-INFO in ch.qos.logback.core.sift.SiftProcessor@60aae8bf - End of configuration.
   [testng] [2024-06-05 01:23:11,734] [pool-1-thread-5] Initializing /data/brian/images/raw_a_rg.bmp: 
   [testng] [2024-06-05 01:23:11,739] [pool-1-thread-11] Initializing /data/curtis/image3.bmp: 
   [testng] [2024-06-05 01:23:11,742] [pool-1-thread-9] Initializing /data/frank/cell_mask_error.bmp: 
   [testng] [2024-06-05 01:23:11,747] [pool-1-thread-10] Initializing /data/brian/images/DMSOHigh_001.bmp: 
   [testng] [2024-06-05 01:23:11,754] [pool-1-thread-2] Initializing /data/dennis/kidney_TFl_Eight.bmp: 
   [testng] [2024-06-05 01:23:11,759] [pool-1-thread-6] Initializing /data/brian/images/raw_a_rg.tiff: 
   [testng] [2024-06-05 01:23:11,785] [pool-1-thread-3] Initializing /data/brian/images/kidney_TFl_1_greyscale.bmp: 
   [testng] [2024-06-05 01:23:11,790] [pool-1-thread-8] Initializing /data/stephane/holo0908.bmp: 
   [testng] [2024-06-05 01:23:11,941] [pool-1-thread-1] Initializing /data/curtis/image2.bmp: 
   [testng] [2024-06-05 01:23:12,091] [pool-1-thread-11] Initializing /data/big-images/8kx8k.bmp: 
   [testng] [2024-06-05 01:23:12,100] [pool-1-thread-7] Initializing /data/bk/100427RBTLPC_FD3__A___5_T_001_ch_00_image_00025_Z_001.bmp: 
   [testng] [2024-06-05 01:23:12,106] [pool-1-thread-5] Initializing /data/curtis/image4.bmp: 
   [testng] [2024-06-05 01:23:12,340] [pool-1-thread-6] Initializing /data/dennis/kidney_TFl_Five.bmp: 
   [testng] [2024-06-05 01:23:12,416] [pool-1-thread-1] Initializing /data/curtis/image5.bmp: 
   [testng] [2024-06-05 01:23:12,460] [pool-1-thread-5] Initializing /data/brian/images/kidney_TFl_1.bmp: 
   [testng] [2024-06-05 01:23:12,465] [pool-1-thread-3] Initializing /data/dennis/kidney_TFl_Nine.bmp: 
   [testng] [2024-06-05 01:23:12,516] [pool-1-thread-9] Initializing /data/dennis/kidney_TFl_One.bmp: 
   [testng] [2024-06-05 01:23:12,565] [pool-1-thread-2] Initializing /data/dennis/kidney_TFl_Six.bmp: 
   [testng] [2024-06-05 01:23:12,599] [pool-1-thread-1] Initializing /data/big-images/6kx6k-grey.bmp: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 1643, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 30 seconds
Finished: SUCCESS