Started by upstream project "BIOFORMATS-test-repo" build number 1
originally caused by:
Started by upstream project "Trigger" build number 1
originally caused by:
Started by user devspace
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7
[BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins15741989570189906822.sh
+ '[' olympus-oir = slidebook ']'
++ date +%u
+ '[' 4 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_13_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/devspace/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] warning: [options] source value 8 is obsolete and will be removed in a future release
[javac] warning: [options] target value 8 is obsolete and will be removed in a future release
[javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
[javac] 4 warnings
test-automated:
[testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
[testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
[testng] File leak detector installed
[testng] 15:58:56,325 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 15:58:56,326 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - No custom configurators were discovered as a service.
[testng] 15:58:56,326 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 15:58:56,327 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 15:58:56,328 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 15:58:56,328 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 15:58:56,328 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 15:58:56,328 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 15:58:56,329 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 15:58:56,330 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 15:58:56,330 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 15:58:56,330 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 15:58:56,501 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 15:58:56,501 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 15:58:56,527 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 15:58:56,527 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 15:58:56,533 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 15:58:56,534 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 15:58:56,534 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 15:58:56,534 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 15:58:56,534 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@d9345cd - End of configuration.
[testng] 15:58:56,535 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@48aca48b - Registering current configuration as safe fallback point
[testng] 15:58:56,535 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 206 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-03-14 15:58:56,545] [main] java.version = 21
[testng] 15:58:56,548 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 15:58:56,549 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 15:58:56,594 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-03-14_15-58-56.log]
[testng] 15:58:56,595 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71687585 - End of configuration.
[testng] [2024-03-14 15:58:56,597] [main] testng.directory = /data
[testng] [2024-03-14 15:58:56,597] [main] testng.configDirectory = /config
[testng] [2024-03-14 15:58:56,607] [main] testng.multiplier = 1.0
[testng] [2024-03-14 15:58:56,607] [main] testng.in-memory = false
[testng] [2024-03-14 15:58:56,607] [main] testng.allow-missing = false
[testng] [2024-03-14 15:58:56,608] [main] user.language = en
[testng] [2024-03-14 15:58:56,608] [main] user.country = ${user.country}
[testng] [2024-03-14 15:58:56,608] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-03-14 15:59:12,085] [main] ----------------------------------------
[testng] [2024-03-14 15:59:12,085] [main] Total files: 283
[testng] [2024-03-14 15:59:12,085] [main] Scan time: 15.477 s (54 ms/file)
[testng] [2024-03-14 15:59:12,086] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 186 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-03-14 16:05:56,253] [pool-1-thread-1] Initializing /data/olympus/XYZt.oir:
[testng] 16:05:56,254 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 16:05:56,254 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 16:05:56,255 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-03-14_16-05-56.log]
[testng] 16:05:56,256 |-INFO in ch.qos.logback.core.sift.SiftProcessor@634624ed - End of configuration.
[testng] [2024-03-14 16:05:57,701] [pool-1-thread-12] Initializing /data/olympus/_calcium sparks_XYt_/stack1/frame_t_0.ets:
[testng] 16:05:57,701 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 16:05:57,702 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 16:05:57,703 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-03-14_16-05-57.log]
[testng] 16:05:57,703 |-INFO in ch.qos.logback.core.sift.SiftProcessor@190de6e9 - End of configuration.
[testng] [2024-03-14 16:05:57,897] [pool-1-thread-11] Initializing /data/olympus/spectral_scan_XYL.oir:
[testng] 16:05:57,897 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 16:05:57,897 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 16:05:57,898 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-03-14_16-05-57.log]
[testng] 16:05:57,899 |-INFO in ch.qos.logback.core.sift.SiftProcessor@668287a1 - End of configuration.
[testng] [2024-03-14 16:05:58,433] [pool-1-thread-10] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif:
[testng] 16:05:58,433 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 16:05:58,434 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 16:05:58,435 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-03-14_16-05-58.log]
[testng] 16:05:58,436 |-INFO in ch.qos.logback.core.sift.SiftProcessor@52651402 - End of configuration.
[testng] [2024-03-14 16:05:58,662] [pool-1-thread-9] Initializing /data/qa-17919/f10187.oir:
[testng] 16:05:58,663 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 16:05:58,663 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 16:05:58,663 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-03-14_16-05-58.log]
[testng] 16:05:58,664 |-INFO in ch.qos.logback.core.sift.SiftProcessor@796879c6 - End of configuration.
[testng] [2024-03-14 16:06:19,499] [pool-1-thread-8] Initializing /data/public/etienne/venus stack.oir:
[testng] 16:06:19,500 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 16:06:19,500 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 16:06:19,501 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-03-14_16-06-19.log]
[testng] 16:06:19,501 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2c84b6cf - End of configuration.
[testng] [2024-03-14 16:06:19,913] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.ome.tif:
[testng] 16:06:19,913 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 16:06:19,913 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 16:06:19,914 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-03-14_16-06-19.log]
[testng] 16:06:19,915 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2339e193 - End of configuration.
[testng] [2024-03-14 16:06:20,160] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.oir:
[testng] 16:06:20,160 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 16:06:20,161 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 16:06:20,161 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-03-14_16-06-20.log]
[testng] 16:06:20,162 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2f468f66 - End of configuration.
[testng] [2024-03-14 16:06:20,333] [pool-1-thread-5] Initializing /data/qa-17922/example_multipart.oir:
[testng] 16:06:20,334 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 16:06:20,334 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 16:06:20,334 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-03-14_16-06-20.log]
[testng] 16:06:20,335 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7fe8e825 - End of configuration.
[testng] [2024-03-14 16:06:45,327] [pool-1-thread-4] Initializing /data/qa-17335/1.ome.tif:
[testng] 16:06:45,328 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 16:06:45,328 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 16:06:45,329 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-03-14_16-06-45.log]
[testng] 16:06:45,329 |-INFO in ch.qos.logback.core.sift.SiftProcessor@70b1e8a3 - End of configuration.
[testng] [2024-03-14 16:06:45,524] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif:
[testng] 16:06:45,525 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 16:06:45,525 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 16:06:45,526 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-03-14_16-06-45.log]
[testng] 16:06:45,526 |-INFO in ch.qos.logback.core.sift.SiftProcessor@518a5da6 - End of configuration.
[testng] [2024-03-14 16:06:45,702] [pool-1-thread-2] Initializing /data/olympus/_stitched 4x4 zstack 10X_XYZ_/stack1/frame_t_0.ets:
[testng] 16:06:45,702 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 16:06:45,702 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 16:06:45,703 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-03-14_16-06-45.log]
[testng] 16:06:45,703 |-INFO in ch.qos.logback.core.sift.SiftProcessor@23a46278 - End of configuration.
[testng] [2024-03-14 16:06:48,626] [pool-1-thread-12] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.ome.tif:
[testng] [2024-03-14 16:06:48,787] [pool-1-thread-7] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir:
[testng] [2024-03-14 16:06:48,898] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-P10-50 D2.tif:
[testng] [2024-03-14 16:06:49,027] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x-1.oir.vsi:
[testng] [2024-03-14 16:06:49,222] [pool-1-thread-4] Initializing /data/cudmore/20190401__0005.oir:
[testng] [2024-03-14 16:06:54,661] [pool-1-thread-10] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z_CONTROL.oir:
[testng] [2024-03-14 16:06:55,776] [pool-1-thread-2] Initializing /data/qa-16881/W11-180 D3 20151021_0024.oir:
[testng] [2024-03-14 16:06:56,090] [pool-1-thread-8] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir:
[testng] [2024-03-14 16:06:56,413] [pool-1-thread-11] Initializing /data/public/etienne/venus stack.ome.tif:
[testng] [2024-03-14 16:06:57,456] [pool-1-thread-3] Initializing /data/olympus/Clipboard-stitched 4x4 zstack 10X_XYZ.tif:
[testng] [2024-03-14 16:06:57,987] [pool-1-thread-6] Initializing /data/qa-16881/P10D1 20150729.oir:
[testng] [2024-03-14 16:06:58,667] [pool-1-thread-12] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.oir:
[testng] [2024-03-14 16:06:59,303] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.oir:
[testng] [2024-03-14 16:06:59,459] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.oir:
[testng] [2024-03-14 16:06:59,570] [pool-1-thread-10] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir:
[testng] [2024-03-14 16:07:00,048] [pool-1-thread-8] Initializing /data/qa-16881/P10-50 D2.ome.tif:
[testng] [2024-03-14 16:07:00,411] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-W1-75 D11 New 20150825_0004.tif:
[testng] [2024-03-14 16:07:01,265] [pool-1-thread-2] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir:
[testng] [2024-03-14 16:07:01,498] [pool-1-thread-6] Initializing /data/olympus/Clipboard-XYZt.tif:
[testng] [2024-03-14 16:07:01,614] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif:
[testng] [2024-03-14 16:07:01,819] [pool-1-thread-1] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif:
[testng] [2024-03-14 16:07:02,046] [pool-1-thread-10] Initializing /data/qa-17917/f10010.oir:
[testng] [2024-03-14 16:07:36,737] [pool-1-thread-12] Initializing /data/qa-17335/stimulation_0001_LSM.oir:
[testng] [2024-03-14 16:07:37,124] [pool-1-thread-8] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif:
[testng] [2024-03-14 16:07:37,385] [pool-1-thread-3] Initializing /data/qa-17335/Clipboard-1.tif:
[testng] [2024-03-14 16:07:38,796] [pool-1-thread-7] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0001.tif:
[testng] [2024-03-14 16:07:38,971] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif:
[testng] [2024-03-14 16:07:39,083] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif:
[testng] [2024-03-14 16:07:39,191] [pool-1-thread-6] Initializing /data/qa-17409/Stitch_A01_G001-exported.ome.tif:
[testng] [2024-03-14 16:07:39,436] [pool-1-thread-2] Initializing /data/qa-16871/XY_0003.ome.tif:
[testng] [2024-03-14 16:07:40,100] [pool-1-thread-3] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.oir:
[testng] [2024-03-14 16:07:40,265] [pool-1-thread-8] Initializing /data/olympus/40X_4CH_XY.vsi:
[testng] [2024-03-14 16:07:40,764] [pool-1-thread-12] Initializing /data/qa-17293/2-z-t_0001_LSM.ome.tif:
[testng] [2024-03-14 16:07:41,059] [pool-1-thread-1] Initializing /data/qa-16871/Clipboard.tif:
[testng] [2024-03-14 16:07:41,177] [pool-1-thread-2] Initializing /data/qa-16881/P10D1 20150729_0024.ome.tif:
[testng] [2024-03-14 16:07:41,512] [pool-1-thread-7] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir:
[testng] [2024-03-14 16:07:41,885] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif:
[testng] [2024-03-14 16:07:42,787] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.ome.tif:
[testng] [2024-03-14 16:07:43,468] [pool-1-thread-12] Initializing /data/qa-16881/P10D1 20150729.ome.tif:
[testng] [2024-03-14 16:07:43,826] [pool-1-thread-1] Initializing /data/olympus/2017-04-20/mito_0006_0001.oir:
[testng] [2024-03-14 16:07:43,965] [pool-1-thread-2] Initializing /data/qa-17270/image1.oir:
[testng] [2024-03-14 16:07:44,197] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.oir:
[testng] [2024-03-14 16:07:44,332] [pool-1-thread-11] Initializing /data/qa-17335/Clipboard-OSR-Z.tif:
[testng] [2024-03-14 16:07:44,684] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi:
[testng] [2024-03-14 16:07:45,194] [pool-1-thread-7] Initializing /data/qa-16881/P10D1 20150729_0024.oir:
[testng] [2024-03-14 16:07:45,401] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.oir:
[testng] [2024-03-14 16:07:45,591] [pool-1-thread-6] Initializing /data/qa-17335/OSR-Z.oir:
[testng] [2024-03-14 16:07:45,734] [pool-1-thread-1] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0024.tif:
[testng] [2024-03-14 16:07:45,812] [pool-1-thread-12] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif:
[testng] [2024-03-14 16:07:46,099] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif:
[testng] [2024-03-14 16:07:46,182] [pool-1-thread-11] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir:
[testng] [2024-03-14 16:07:47,070] [pool-1-thread-3] Initializing /data/olympus/40X_4CH_XY.oir:
[testng] [2024-03-14 16:07:47,877] [pool-1-thread-6] Initializing /data/qa-17270/Clipboard-alexa488.tif:
[testng] [2024-03-14 16:07:48,013] [pool-1-thread-1] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir:
[testng] [2024-03-14 16:07:48,327] [pool-1-thread-7] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif:
[testng] [2024-03-14 16:07:48,405] [pool-1-thread-2] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir:
[testng] [2024-03-14 16:07:48,538] [pool-1-thread-8] Initializing /data/olympus/40X_4CH_XY.ome.tif:
[testng] [2024-03-14 16:07:48,724] [pool-1-thread-12] Initializing /data/olympus/Clipboard-40X_4CH_XY.tif:
[testng] [2024-03-14 16:07:50,739] [pool-1-thread-7] Initializing /data/qa-17331/60x zstack RS.oir:
[testng] [2024-03-14 16:07:51,203] [pool-1-thread-6] Initializing /data/qa-16881/W11-180 D3 20151021_0006.oir:
[testng] [2024-03-14 16:07:51,397] [pool-1-thread-12] Initializing /data/olympus/calcium sparks_XYt.oir:
[testng] [2024-03-14 16:07:52,105] [pool-1-thread-1] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif:
[testng] [2024-03-14 16:07:52,557] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Clipboard-Image_0001_0001.tif:
[testng] [2024-03-14 16:07:53,310] [pool-1-thread-11] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif:
[testng] [2024-03-14 16:07:53,782] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0019.tif:
[testng] [2024-03-14 16:07:54,069] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif:
[testng] [2024-03-14 16:07:54,599] [pool-1-thread-1] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi:
[testng] [2024-03-14 16:07:54,679] [pool-1-thread-3] Initializing /data/qa-18802/20171020_JupGFPHisRFP_L3_30xSI_galvo_p5z_p1xy_better_than_nyquist.oir:
[testng] [2024-03-14 16:07:56,314] [pool-1-thread-1] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir:
[testng] [2024-03-14 16:07:57,131] [pool-1-thread-2] Initializing /data/olympus/2017-11-20/xytz_golgi/xytz_golgi.oir:
[testng] [2024-03-14 16:07:58,247] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.ome.tif:
[testng] [2024-03-14 16:07:58,355] [pool-1-thread-12] Initializing /data/qa-16881/P10-50 D2_0006.ome.tif:
[testng] [2024-03-14 16:07:58,462] [pool-1-thread-8] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif:
[testng] [2024-03-14 16:07:58,576] [pool-1-thread-6] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif:
[testng] [2024-03-14 16:07:58,980] [pool-1-thread-7] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif:
[testng] [2024-03-14 16:08:00,055] [pool-1-thread-11] Initializing /data/qa-17335/OSR-Z.ome.tif:
[testng] [2024-03-14 16:08:00,775] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif:
[testng] [2024-03-14 16:08:01,157] [pool-1-thread-6] Initializing /data/qa-17270/stack1.ome.tif:
[testng] [2024-03-14 16:08:01,373] [pool-1-thread-7] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir:
[testng] [2024-03-14 16:08:02,162] [pool-1-thread-4] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/matl.omp2info:
[testng] [2024-03-14 16:08:04,964] [pool-1-thread-11] Initializing /data/olympus/Stitched_XYZ.oir:
[testng] [2024-03-14 16:08:05,417] [pool-1-thread-12] Initializing /data/public/etienne/amy slice z stack_0001.ome.tif:
[testng] [2024-03-14 16:08:05,751] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif:
[testng] [2024-03-14 16:08:06,034] [pool-1-thread-1] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir:
[testng] [2024-03-14 16:08:06,508] [pool-1-thread-7] Initializing /data/olympus/2017-11-20/fish_overview/fish-overview-night.oir:
[testng] [2024-03-14 16:08:11,337] [pool-1-thread-8] Initializing /data/qa-17270/image1.ome.tif:
[testng] [2024-03-14 16:08:11,420] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif:
[testng] [2024-03-14 16:08:11,926] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-Caged Glu-3 point.tif:
[testng] [2024-03-14 16:08:12,240] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-LILY POLLEN.tif:
[testng] [2024-03-14 16:08:12,889] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Clipboard-Image_0099_0001.tif:
[testng] [2024-03-14 16:08:13,117] [pool-1-thread-12] Initializing /data/olympus/calcium sparks_XYt.ome.tif:
[testng] [2024-03-14 16:08:13,277] [pool-1-thread-8] Initializing /data/qa-17409/Stitch_A01_G001.oir:
[testng] [2024-03-14 16:08:13,660] [pool-1-thread-2] Initializing /data/olympus/2017-04-20/Clipboard.tif:
[testng] [2024-03-14 16:08:13,850] [pool-1-thread-3] Initializing /data/qa-17331/60x zstack RS.ome.tif:
[testng] [2024-03-14 16:08:14,332] [pool-1-thread-6] Initializing /data/public/etienne/amy slice z stack_0001.oir:
[testng] [2024-03-14 16:08:14,790] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/Clipboard.tif:
[testng] [2024-03-14 16:08:15,402] [pool-1-thread-11] Initializing /data/qa-16881/P10-50 D2_0006.oir:
[testng] [2024-03-14 16:08:15,723] [pool-1-thread-2] Initializing /data/qa-16881/P10D1 20150729_0019.oir:
[testng] [2024-03-14 16:08:16,319] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir:
[testng] [2024-03-14 16:08:16,465] [pool-1-thread-3] Initializing /data/qa-17293/Clipboard.tif:
[testng] [2024-03-14 16:08:16,680] [pool-1-thread-6] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir:
[testng] [2024-03-14 16:08:17,394] [pool-1-thread-1] Initializing /data/olympus/2017-04-20/mito_0006_0001.ome.tif:
[testng] [2024-03-14 16:08:18,144] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.oir:
[testng] [2024-03-14 16:08:18,283] [pool-1-thread-2] Initializing /data/qa-16881/P10-50 D2.oir:
[testng] [2024-03-14 16:08:18,574] [pool-1-thread-11] Initializing /data/qa-17270/stack1.oir:
[testng] [2024-03-14 16:08:20,493] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif:
[testng] [2024-03-14 16:08:20,696] [pool-1-thread-8] Initializing /data/qa-17270/alexa488.oir:
[testng] [2024-03-14 16:08:20,901] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif:
[testng] [2024-03-14 16:08:21,953] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-W1-135 D6 New 20150818_0010.tif:
[testng] [2024-03-14 16:08:22,374] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif:
[testng] [2024-03-14 16:08:22,718] [pool-1-thread-3] Initializing /data/qa-16881/P10-50 D2_0019.ome.tif:
[testng] [2024-03-14 16:08:23,128] [pool-1-thread-1] Initializing /data/olympus/calcium sparks.jpg:
[testng] [2024-03-14 16:08:23,303] [pool-1-thread-8] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.ome.tif:
[testng] [2024-03-14 16:08:23,464] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir:
[testng] [2024-03-14 16:08:24,531] [pool-1-thread-12] Initializing /data/qa-16881/W11-180 D3 20151021_0024.ome.tif:
[testng] [2024-03-14 16:08:25,180] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.oir:
[testng] [2024-03-14 16:08:25,428] [pool-1-thread-3] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif:
[testng] [2024-03-14 16:08:26,185] [pool-1-thread-8] Initializing /data/qa-17270/alexa488.ome.tif:
[testng] [2024-03-14 16:08:26,560] [pool-1-thread-2] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.ome.tif:
[testng] [2024-03-14 16:08:26,707] [pool-1-thread-1] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir:
[testng] [2024-03-14 16:08:26,918] [pool-1-thread-12] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/image_Cycle_02.oir:
[testng] [2024-03-14 16:08:27,627] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.ome.tif:
[testng] [2024-03-14 16:08:28,133] [pool-1-thread-6] Initializing /data/martin/20170824_JupGFP_HisRFP_wL3_30xSI_4xzoom_0p5z_A01_G001_0001.oir:
[testng] [2024-03-14 16:09:26,214] [pool-1-thread-2] Initializing /data/qa-17409/Clipboard.tif:
[testng] [2024-03-14 16:09:26,558] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Clipboard-Image_0033_0001.tif:
[testng] [2024-03-14 16:09:26,700] [pool-1-thread-8] Initializing /data/olympus/spectral_scan_XYL.ome.tif:
[testng] [2024-03-14 16:09:26,985] [pool-1-thread-12] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/matl.omp2info:
[testng] [2024-03-14 16:09:29,420] [pool-1-thread-11] Initializing /data/qa-17293/2-z-t_0001_LSM.oir:
[testng] [2024-03-14 16:09:30,270] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.oir:
[testng] [2024-03-14 16:09:31,139] [pool-1-thread-2] Initializing /data/public/etienne/Clipboard-venus stack.tif:
[testng] [2024-03-14 16:09:31,470] [pool-1-thread-3] Initializing /data/qa-17335/1.oir:
[testng] [2024-03-14 16:09:31,566] [pool-1-thread-11] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir:
[testng] [2024-03-14 16:09:36,929] [pool-1-thread-8] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info:
[testng] [2024-03-14 16:09:41,679] [pool-1-thread-3] Initializing /data/qa-16871/XY_0003.oir:
[testng] [2024-03-14 16:09:42,385] [pool-1-thread-2] Initializing /data/qa-17270/Clipboard-image1.tif:
[testng] [2024-03-14 16:09:43,113] [pool-1-thread-3] Initializing /data/qa-17270/Clipboard-stack1.tif:
[testng] [2024-03-14 16:09:44,043] [pool-1-thread-1] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.ome.tif:
[testng] [2024-03-14 16:09:44,413] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.oir:
[testng] [2024-03-14 16:09:44,782] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-P10-50 D2_0019.tif:
[testng] [2024-03-14 16:09:46,318] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.ome.tif:
[testng] [2024-03-14 16:09:46,908] [pool-1-thread-1] Initializing /data/public/etienne/coupe shg stack_0001.ome.tif:
[testng] [2024-03-14 16:09:47,055] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi:
[testng] [2024-03-14 16:09:48,101] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-P10-50 D2_0006.tif:
[testng] [2024-03-14 16:09:49,077] [pool-1-thread-1] Initializing /data/qa-16881/P10D1 20150729_0019.ome.tif:
[testng] [2024-03-14 16:09:49,310] [pool-1-thread-2] Initializing /data/olympus/2021-04-20/overview 2 x_Cycle_01/matl.omp2info:
[testng] [2024-03-14 16:09:50,075] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-P10D1 20150729.tif:
[testng] [2024-03-14 16:09:51,053] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Clipboard-Image_0079_0001.tif:
[testng] [2024-03-14 16:09:51,957] [pool-1-thread-3] Initializing /data/olympus/Stitched_XYZ.ome.tif:
[testng] [2024-03-14 16:09:52,362] [pool-1-thread-2] Initializing /data/olympus/XYZt.vsi:
[testng] [2024-03-14 16:09:52,806] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Clipboard-Image_0050_0001.tif:
[testng] [2024-03-14 16:09:52,869] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/zebra shg.oir:
[testng] [2024-03-14 16:09:54,997] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif:
[testng] [2024-03-14 16:09:55,869] [pool-1-thread-7] Initializing /data/qa-17335/Clipboard-stimulation_0001_LSM.tif:
[testng] [2024-03-14 16:09:56,352] [pool-1-thread-2] Initializing /data/olympus/Clipboard-calcium sparks_XYt.tif:
[testng] [2024-03-14 16:09:57,221] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0024.tif:
[testng] [2024-03-14 16:09:57,712] [pool-1-thread-7] Initializing /data/qa-16881/P10-50 D2_0019.oir:
[testng] [2024-03-14 16:09:58,129] [pool-1-thread-2] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-PA-GFPv-2.tif:
[testng] [2024-03-14 16:09:59,196] [pool-1-thread-3] Initializing /data/qa-17331/Clipboard.tif:
[testng] [2024-03-14 16:09:59,635] [pool-1-thread-2] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif:
[testng] [2024-03-14 16:09:59,829] [pool-1-thread-7] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png:
[testng] [2024-03-14 16:10:00,077] [pool-1-thread-7] Initializing /data/olympus/XYZt.ome.tif:
[testng] [2024-03-14 16:10:00,348] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Clipboard-Image_0091_0001.tif:
[testng] [2024-03-14 16:10:00,822] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir:
[testng] [2024-03-14 16:10:01,721] [pool-1-thread-2] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.oir:
[testng] [2024-03-14 16:10:02,255] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.oir:
[testng] [2024-03-14 16:10:03,753] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir:
[testng] [2024-03-14 16:10:03,865] [pool-1-thread-4] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif:
[testng] [2024-03-14 16:10:04,016] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif:
[testng] [2024-03-14 16:10:05,066] [pool-1-thread-2] Initializing /data/qa-16881/Clipboard-W4-0 D14 New 20150828_0007.tif:
[testng] [2024-03-14 16:10:05,712] [pool-1-thread-4] Initializing /data/public/etienne/coupe shg stack_0001.oir:
[testng] [2024-03-14 16:10:06,026] [pool-1-thread-3] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.ome.tif:
[testng] [2024-03-14 16:10:06,811] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif:
[testng] [2024-03-14 16:10:07,453] [pool-1-thread-2] Initializing /data/qa-21508/Stitch_A01_G008.oir:
[testng] [2024-03-14 16:10:08,396] [pool-1-thread-7] Initializing /data/olympus/Stitched_XYZ.vsi:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 9858, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 46 minutes 0 seconds
Finished: SUCCESS