Started by upstream project "BIOFORMATS-test-repo" build number 85
originally caused by:
 Started by upstream project "Trigger" build number 96
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8
[BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins7043187157274082883.sh
+ '[' scanr = slidebook ']'
++ date +%u
+ '[' 5 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_13055_merge_ci -v /uod/idr/repos/curated/scanr:/data -v /uod/idr-scratch/merge-ci/curated/scanr:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test

test-automated:
   [testng] File leak detector installed
   [testng] 02:24:35,811 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 02:24:35,843 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 02:24:35,871 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 02:24:35,872 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 02:24:35,880 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 02:24:35,880 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 02:24:35,880 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 02:24:35,881 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 02:24:35,881 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5c30a9b0 - End of configuration.
   [testng] 02:24:35,881 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@7a69b07 - Registering current configuration as safe fallback point
   [testng] 02:24:35,882 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5e82df6a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 387 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-06-07 02:24:35,891] [main] java.version = 1.8.0_342
   [testng] 02:24:35,895 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 02:24:35,895 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:24:35,948 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-07_02-24-35.log]
   [testng] 02:24:35,950 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
   [testng] [2024-06-07 02:24:35,952] [main] testng.directory = /data
   [testng] [2024-06-07 02:24:35,952] [main] testng.configDirectory = /config
   [testng] [2024-06-07 02:24:35,965] [main] testng.multiplier = 1.0
   [testng] [2024-06-07 02:24:35,965] [main] testng.in-memory = false
   [testng] [2024-06-07 02:24:35,965] [main] testng.allow-missing = false
   [testng] [2024-06-07 02:24:35,965] [main] user.language = en
   [testng] [2024-06-07 02:24:35,965] [main] user.country = ${user.country}
   [testng] [2024-06-07 02:24:35,965] [main] Maximum heap size = 13653 MB
   [testng] Scanning for files...
   [testng] [2024-06-07 02:30:25,055] [main] ----------------------------------------
   [testng] [2024-06-07 02:30:25,056] [main] Total files: 2169
   [testng] [2024-06-07 02:30:25,056] [main] Scan time: 349.09 s (160 ms/file)
   [testng] [2024-06-07 02:30:25,056] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 17 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-06-07 02:47:49,170] [pool-1-thread-1] Initializing /data/juergen/Experiment/experiment_descriptor.xml: 
   [testng] 02:47:49,171 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 02:47:49,171 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:47:49,172 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-07_02-47-49.log]
   [testng] 02:47:49,172 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7384a892 - End of configuration.
   [testng] [2024-06-07 02:47:49,489] [pool-1-thread-12] Initializing /data/ruben/161009test2/151009_002/experiment_descriptor.xml: 
   [testng] 02:47:49,489 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 02:47:49,489 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:47:49,490 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-06-07_02-47-49.log]
   [testng] 02:47:49,491 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1e741401 - End of configuration.
   [testng] [2024-06-07 02:48:51,986] [pool-1-thread-11] Initializing /data/ruben/TestPlate_Mock_01_001/experiment_descriptor.xml: 
   [testng] 02:48:51,986 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 02:48:51,986 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:48:51,987 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-07_02-48-51.log]
   [testng] 02:48:51,987 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6f279d01 - End of configuration.
   [testng] [2024-06-07 02:48:52,228] [pool-1-thread-10] Initializing /data/ruben/280809_8wellLT_008/experiment_descriptor.xml: 
   [testng] 02:48:52,228 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 02:48:52,229 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:48:52,229 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-07_02-48-52.log]
   [testng] 02:48:52,229 |-INFO in ch.qos.logback.core.sift.SiftProcessor@27af67ec - End of configuration.
   [testng] [2024-06-07 02:48:52,370] [pool-1-thread-9] Initializing /data/ruben/plate_002/experiment_descriptor.xml: 
   [testng] 02:48:52,370 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 02:48:52,370 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:48:52,371 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-07_02-48-52.log]
   [testng] 02:48:52,372 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2624454 - End of configuration.
   [testng] [2024-06-07 02:48:52,454] [pool-1-thread-8] Initializing /data/jcb/201301120/p17/experiment_descriptor.xml: 
   [testng] 02:48:52,454 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 02:48:52,454 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:48:52,455 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-07_02-48-52.log]
   [testng] 02:48:52,455 |-INFO in ch.qos.logback.core.sift.SiftProcessor@63a48af7 - End of configuration.
   [testng] [2024-06-07 02:50:10,938] [pool-1-thread-7] Initializing /data/embl/Maik_001/experiment_descriptor.xml: 
   [testng] 02:50:10,939 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 02:50:10,939 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:50:10,940 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-07_02-50-10.log]
   [testng] 02:50:10,940 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2bad769f - End of configuration.
   [testng] [2024-06-07 02:50:18,004] [pool-1-thread-6] Initializing /data/ruben/scanr_no_labels/Peter/experiment_descriptor.xml: 
   [testng] 02:50:18,004 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 02:50:18,004 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:50:18,005 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-07_02-50-18.log]
   [testng] 02:50:18,006 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2001890f - End of configuration.
   [testng] [2024-06-07 02:50:18,903] [pool-1-thread-5] Initializing /data/gideon/experiment_descriptor.xml: 
   [testng] 02:50:18,903 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 02:50:18,903 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:50:18,904 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-07_02-50-18.log]
   [testng] 02:50:18,904 |-INFO in ch.qos.logback.core.sift.SiftProcessor@25018e84 - End of configuration.
   [testng] [2024-06-07 02:50:48,439] [pool-1-thread-4] Initializing /data/embl/170309_Sec13_GM130m_001/experiment_descriptor.xml: 
   [testng] 02:50:48,439 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 02:50:48,439 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:50:48,440 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-07_02-50-48.log]
   [testng] 02:50:48,441 |-INFO in ch.qos.logback.core.sift.SiftProcessor@10eaf362 - End of configuration.
   [testng] [2024-06-07 02:51:59,256] [pool-1-thread-3] Initializing /data/ruben/12-05-25_009/experiment_descriptor.xml: 
   [testng] 02:51:59,257 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 02:51:59,257 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:51:59,258 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-07_02-51-59.log]
   [testng] 02:51:59,259 |-INFO in ch.qos.logback.core.sift.SiftProcessor@77ae27a4 - End of configuration.
   [testng] [2024-06-07 02:52:25,089] [pool-1-thread-2] Initializing /data/ruben/20100827_004/experiment_descriptor.xml: 
   [testng] 02:52:25,090 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 02:52:25,090 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:52:25,090 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-07_02-52-25.log]
   [testng] 02:52:25,091 |-INFO in ch.qos.logback.core.sift.SiftProcessor@10c7ce94 - End of configuration.
   [testng] [2024-06-07 02:52:29,756] [pool-1-thread-1] Initializing /data/nadine/experiment_descriptor.xml: 
   [testng] [2024-06-07 02:52:31,887] [pool-1-thread-1] Initializing /data/public/idr0009/0307-10--2007-05-30/experiment_descriptor.xml: 
   [testng] [2024-06-07 02:53:42,533] [pool-1-thread-10] Initializing /data/jcb/201301120/p2/experiment_descriptor.xml: 
   [testng] [2024-06-07 02:55:15,551] [pool-1-thread-7] Initializing /data/christian/example/experiment_descriptor.xml: 
   [testng] [2024-06-07 02:55:17,140] [pool-1-thread-7] Initializing /data/ruben/161009test2/151009_001/experiment_descriptor.xml: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 901, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 38 minutes 20 seconds
Finished: SUCCESS