Started by upstream project "BIOFORMATS-test-repo" build number 87
originally caused by:
 Started by upstream project "Trigger" build number 98
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6
[BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins1333650655551258055.sh
+ '[' imagepro = slidebook ']'
++ date +%u
+ '[' 7 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_13415_merge_ci -v /uod/idr/repos/curated/imagepro:/data -v /uod/idr-scratch/merge-ci/curated/imagepro:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
   [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
   [testng] File leak detector installed
   [testng] 02:43:42,900 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 02:43:42,902 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service.
   [testng] 02:43:42,902 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 02:43:42,903 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 02:43:42,904 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 02:43:42,905 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 02:43:42,905 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 02:43:42,905 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 02:43:42,906 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 02:43:42,907 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 02:43:42,907 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 02:43:42,908 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 02:43:43,094 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 02:43:43,094 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 02:43:43,120 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 02:43:43,121 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 02:43:43,127 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 02:43:43,127 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 02:43:43,127 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 02:43:43,128 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 02:43:43,128 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration.
   [testng] 02:43:43,129 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point
   [testng] 02:43:43,129 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 223 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-06-09 02:43:43,139] [main] java.version = 17.0.2
   [testng] 02:43:43,143 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 02:43:43,143 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:43:43,187 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-09_02-43-43.log]
   [testng] 02:43:43,188 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration.
   [testng] [2024-06-09 02:43:43,191] [main] testng.directory = /data
   [testng] [2024-06-09 02:43:43,191] [main] testng.configDirectory = /config
   [testng] [2024-06-09 02:43:43,200] [main] testng.multiplier = 1.0
   [testng] [2024-06-09 02:43:43,201] [main] testng.in-memory = false
   [testng] [2024-06-09 02:43:43,201] [main] testng.allow-missing = false
   [testng] [2024-06-09 02:43:43,201] [main] user.language = en
   [testng] [2024-06-09 02:43:43,202] [main] user.country = ${user.country}
   [testng] [2024-06-09 02:43:43,202] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-06-09 02:43:44,373] [main] ----------------------------------------
   [testng] [2024-06-09 02:43:44,374] [main] Total files: 22
   [testng] [2024-06-09 02:43:44,374] [main] Scan time: 1.171 s (53 ms/file)
   [testng] [2024-06-09 02:43:44,374] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 21 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-06-09 02:43:52,407] [pool-1-thread-1] Initializing /data/converted/mitosis-test.tif: 
   [testng] 02:43:52,408 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 02:43:52,409 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:43:52,410 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-09_02-43-52.log]
   [testng] 02:43:52,411 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6435e3a - End of configuration.
   [testng] [2024-06-09 02:43:52,622] [pool-1-thread-12] Initializing /data/samples/TISSUE.TIF: 
   [testng] 02:43:52,622 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 02:43:52,622 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:43:52,624 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-06-09_02-43-52.log]
   [testng] 02:43:52,624 |-INFO in ch.qos.logback.core.sift.SiftProcessor@780420ad - End of configuration.
   [testng] [2024-06-09 02:43:52,671] [pool-1-thread-11] Initializing /data/converted/NESb_C2_TP7.ipw: 
   [testng] 02:43:52,672 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 02:43:52,672 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:43:52,675 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-09_02-43-52.log]
   [testng] 02:43:52,676 |-INFO in ch.qos.logback.core.sift.SiftProcessor@230e5553 - End of configuration.
   [testng] [2024-06-09 02:43:52,711] [pool-1-thread-10] Initializing /data/xiuwen/head2.seq: 
   [testng] 02:43:52,711 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 02:43:52,711 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:43:52,712 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-09_02-43-52.log]
   [testng] 02:43:52,712 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3cc61d5c - End of configuration.
   [testng] [2024-06-09 02:43:52,820] [pool-1-thread-9] Initializing /data/converted/dub01.ipw: 
   [testng] 02:43:52,820 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 02:43:52,821 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:43:52,822 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-09_02-43-52.log]
   [testng] 02:43:52,822 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4976cd4b - End of configuration.
   [testng] [2024-06-09 02:43:52,863] [pool-1-thread-8] Initializing /data/converted/clown.ipw: 
   [testng] 02:43:52,863 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 02:43:52,863 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:43:52,864 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-09_02-43-52.log]
   [testng] 02:43:52,864 |-INFO in ch.qos.logback.core.sift.SiftProcessor@203e9a0 - End of configuration.
   [testng] [2024-06-09 02:43:52,880] [pool-1-thread-7] Initializing /data/converted/NESb_C2_TP7.seq: 
   [testng] 02:43:52,880 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 02:43:52,880 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:43:52,881 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-09_02-43-52.log]
   [testng] 02:43:52,881 |-INFO in ch.qos.logback.core.sift.SiftProcessor@d90057d - End of configuration.
   [testng] [2024-06-09 02:43:52,922] [pool-1-thread-6] Initializing /data/converted/clown8c.seq: 
   [testng] 02:43:52,923 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 02:43:52,923 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:43:52,923 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-09_02-43-52.log]
   [testng] 02:43:52,924 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1c9bd09c - End of configuration.
   [testng] [2024-06-09 02:43:52,941] [pool-1-thread-5] Initializing /data/converted/mitosis-test.ipw: 
   [testng] 02:43:52,941 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 02:43:52,941 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:43:52,942 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-09_02-43-52.log]
   [testng] 02:43:52,942 |-INFO in ch.qos.logback.core.sift.SiftProcessor@51a15d4a - End of configuration.
   [testng] [2024-06-09 02:43:52,993] [pool-1-thread-4] Initializing /data/converted/clown.tif: 
   [testng] 02:43:52,993 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 02:43:52,993 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:43:52,994 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-09_02-43-52.log]
   [testng] 02:43:52,994 |-INFO in ch.qos.logback.core.sift.SiftProcessor@438f6061 - End of configuration.
   [testng] [2024-06-09 02:43:53,016] [pool-1-thread-3] Initializing /data/converted/clown.seq: 
   [testng] 02:43:53,017 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 02:43:53,017 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:43:53,018 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-09_02-43-53.log]
   [testng] 02:43:53,019 |-INFO in ch.qos.logback.core.sift.SiftProcessor@35d808a3 - End of configuration.
   [testng] [2024-06-09 02:43:53,043] [pool-1-thread-2] Initializing /data/converted/clown8c.tif: 
   [testng] 02:43:53,043 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 02:43:53,043 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:43:53,044 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-09_02-43-53.log]
   [testng] 02:43:53,045 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4c90a0bb - End of configuration.
   [testng] [2024-06-09 02:43:54,777] [pool-1-thread-3] Initializing /data/converted/dub01.seq: 
   [testng] [2024-06-09 02:43:54,804] [pool-1-thread-4] Initializing /data/samples/HEART.SEQ: 
   [testng] [2024-06-09 02:43:54,828] [pool-1-thread-8] Initializing /data/converted/NESb_C2_TP7.tiff: 
   [testng] [2024-06-09 02:43:54,893] [pool-1-thread-6] Initializing /data/samples/FLDUAL.TIF: 
   [testng] [2024-06-09 02:43:54,930] [pool-1-thread-5] Initializing /data/samples/PROBE.TIF: 
   [testng] [2024-06-09 02:43:54,948] [pool-1-thread-2] Initializing /data/converted/dub01.pic: 
   [testng] [2024-06-09 02:43:54,971] [pool-1-thread-12] Initializing /data/converted/clown8c.ipw: 
   [testng] [2024-06-09 02:43:54,981] [pool-1-thread-9] Initializing /data/alex/AFAset0003.ips: 
   [testng] [2024-06-09 02:43:54,994] [pool-1-thread-7] Initializing /data/converted/mitosis-test.seq: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 1113, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 30 seconds
Finished: SUCCESS