Started by upstream project "BIOFORMATS-test-repo" build number 88
originally caused by:
Started by upstream project "Trigger" build number 99
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5
[BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins14557326716348437479.sh
+ '[' gatan = slidebook ']'
++ date +%u
+ '[' 1 -le 1 ']'
+ DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR'
+ sudo docker run --rm --name BIOFORMATS-test-folder_13424_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 01:20:41,503 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 01:20:41,504 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service.
[testng] 01:20:41,504 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:20:41,506 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:20:41,506 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 01:20:41,506 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 01:20:41,506 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 01:20:41,506 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:20:41,507 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:20:41,507 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 01:20:41,507 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 01:20:41,507 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 01:20:41,740 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 01:20:41,740 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 01:20:41,770 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 01:20:41,770 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 01:20:41,779 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 01:20:41,779 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 01:20:41,779 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 01:20:41,779 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 01:20:41,779 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration.
[testng] 01:20:41,780 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point
[testng] 01:20:41,780 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 273 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-06-10 01:20:41,790] [main] java.version = 1.8.0_342
[testng] 01:20:41,794 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 01:20:41,794 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:20:41,843 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-10_01-20-41.log]
[testng] 01:20:41,845 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
[testng] [2024-06-10 01:20:41,847] [main] testng.directory = /data
[testng] [2024-06-10 01:20:41,847] [main] testng.configDirectory = /config
[testng] [2024-06-10 01:20:41,859] [main] testng.multiplier = 1.0
[testng] [2024-06-10 01:20:41,859] [main] testng.in-memory = false
[testng] [2024-06-10 01:20:41,859] [main] testng.allow-missing = false
[testng] [2024-06-10 01:20:41,859] [main] user.language = fr
[testng] [2024-06-10 01:20:41,859] [main] user.country = FR
[testng] [2024-06-10 01:20:41,859] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2024-06-10 01:20:42,891] [main] ----------------------------------------
[testng] [2024-06-10 01:20:42,891] [main] Total files: 103
[testng] [2024-06-10 01:20:42,891] [main] Scan time: 1.032 s (10 ms/file)
[testng] [2024-06-10 01:20:42,891] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 98 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-06-10 01:20:51,352] [pool-1-thread-1] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4:
[testng] 01:20:51,354 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 01:20:51,354 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:20:51,357 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-10_01-20-51.log]
[testng] 01:20:51,357 |-INFO in ch.qos.logback.core.sift.SiftProcessor@645ff805 - End of configuration.
[testng] [2024-06-10 01:20:51,417] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4:
[testng] 01:20:51,417 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 01:20:51,417 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:20:51,418 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-06-10_01-20-51.log]
[testng] 01:20:51,418 |-INFO in ch.qos.logback.core.sift.SiftProcessor@58160ded - End of configuration.
[testng] [2024-06-10 01:20:51,437] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4:
[testng] 01:20:51,437 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 01:20:51,437 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:20:51,438 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-10_01-20-51.log]
[testng] 01:20:51,439 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6e069031 - End of configuration.
[testng] [2024-06-10 01:20:51,459] [pool-1-thread-10] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif:
[testng] 01:20:51,459 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 01:20:51,459 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:20:51,460 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-10_01-20-51.log]
[testng] 01:20:51,460 |-INFO in ch.qos.logback.core.sift.SiftProcessor@70a8a7ee - End of configuration.
[testng] [2024-06-10 01:20:51,516] [pool-1-thread-9] Initializing /data/qa-11392/Example_Gatan_File.dm4:
[testng] 01:20:51,517 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 01:20:51,517 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:20:51,518 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-10_01-20-51.log]
[testng] 01:20:51,518 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5ade342d - End of configuration.
[testng] [2024-06-10 01:20:51,537] [pool-1-thread-8] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif:
[testng] 01:20:51,538 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 01:20:51,538 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:20:51,538 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-10_01-20-51.log]
[testng] 01:20:51,539 |-INFO in ch.qos.logback.core.sift.SiftProcessor@130c0ce0 - End of configuration.
[testng] [2024-06-10 01:20:51,628] [pool-1-thread-7] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3:
[testng] 01:20:51,628 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 01:20:51,628 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:20:51,629 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-10_01-20-51.log]
[testng] 01:20:51,630 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6e065101 - End of configuration.
[testng] [2024-06-10 01:20:51,666] [pool-1-thread-6] Initializing /data/thorsten/60kx_HAADF_03.dm3:
[testng] 01:20:51,667 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 01:20:51,667 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:20:51,668 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-10_01-20-51.log]
[testng] 01:20:51,668 |-INFO in ch.qos.logback.core.sift.SiftProcessor@22263f84 - End of configuration.
[testng] [2024-06-10 01:20:51,689] [pool-1-thread-5] Initializing /data/jay/Carbon.34.dm3:
[testng] 01:20:51,689 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 01:20:51,689 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:20:51,690 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-10_01-20-51.log]
[testng] 01:20:51,690 |-INFO in ch.qos.logback.core.sift.SiftProcessor@45d7a69f - End of configuration.
[testng] [2024-06-10 01:20:51,779] [pool-1-thread-4] Initializing /data/jay/dnasample1.dm3:
[testng] 01:20:51,780 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 01:20:51,780 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:20:51,780 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-10_01-20-51.log]
[testng] 01:20:51,781 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7e089c2a - End of configuration.
[testng] [2024-06-10 01:20:51,810] [pool-1-thread-3] Initializing /data/jay/camtest1.dm3:
[testng] 01:20:51,810 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 01:20:51,810 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:20:51,810 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-10_01-20-51.log]
[testng] 01:20:51,811 |-INFO in ch.qos.logback.core.sift.SiftProcessor@77ee426c - End of configuration.
[testng] [2024-06-10 01:20:51,844] [pool-1-thread-2] Initializing /data/jay/ViewDMtest.dm3:
[testng] 01:20:51,845 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 01:20:51,845 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:20:51,846 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-10_01-20-51.log]
[testng] 01:20:51,846 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1c9002dd - End of configuration.
[testng] [2024-06-10 01:20:54,341] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4:
[testng] [2024-06-10 01:20:54,353] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4:
[testng] [2024-06-10 01:20:54,976] [pool-1-thread-6] Initializing /data/jay/biosamplefullframe.dm3:
[testng] [2024-06-10 01:20:55,332] [pool-1-thread-8] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif:
[testng] [2024-06-10 01:20:55,402] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4:
[testng] [2024-06-10 01:20:56,126] [pool-1-thread-11] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3:
[testng] [2024-06-10 01:20:56,432] [pool-1-thread-12] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4:
[testng] [2024-06-10 01:20:56,772] [pool-1-thread-8] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3:
[testng] [2024-06-10 01:20:58,083] [pool-1-thread-10] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif:
[testng] [2024-06-10 01:20:58,201] [pool-1-thread-7] Initializing /data/melissa/annotation-test.dm3:
[testng] [2024-06-10 01:20:58,379] [pool-1-thread-7] Initializing /data/ofra/Co on INT 28-12-10.11.dm3:
[testng] [2024-06-10 01:20:59,114] [pool-1-thread-2] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3:
[testng] [2024-06-10 01:20:59,125] [pool-1-thread-3] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4:
[testng] [2024-06-10 01:20:59,135] [pool-1-thread-4] Initializing /data/ofra/lowloss.dm3:
[testng] [2024-06-10 01:20:59,181] [pool-1-thread-5] Initializing /data/jay/samples/APC2a-e5.dm3:
[testng] [2024-06-10 01:20:59,221] [pool-1-thread-7] Initializing /data/jay/samples/APC2a-e3.dm3:
[testng] [2024-06-10 01:20:59,278] [pool-1-thread-4] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4:
[testng] [2024-06-10 01:20:59,632] [pool-1-thread-4] Initializing /data/jay/DMtest2.dm3:
[testng] [2024-06-10 01:21:00,006] [pool-1-thread-5] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4:
[testng] [2024-06-10 01:21:00,043] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4:
[testng] [2024-06-10 01:21:00,775] [pool-1-thread-9] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4:
[testng] [2024-06-10 01:21:00,822] [pool-1-thread-6] Initializing /data/qa-7642/8.dm4:
[testng] [2024-06-10 01:21:01,179] [pool-1-thread-9] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4:
[testng] [2024-06-10 01:21:01,388] [pool-1-thread-11] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif:
[testng] [2024-06-10 01:21:01,556] [pool-1-thread-8] Initializing /data/melissa/annotation-test.tif:
[testng] [2024-06-10 01:21:02,377] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4:
[testng] [2024-06-10 01:21:02,407] [pool-1-thread-11] Initializing /data/qa-21761/example.dm4:
[testng] [2024-06-10 01:21:02,688] [pool-1-thread-8] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4:
[testng] [2024-06-10 01:21:02,885] [pool-1-thread-7] Initializing /data/jay/recAmaghi.dm3:
[testng] [2024-06-10 01:21:03,450] [pool-1-thread-11] Initializing /data/jay/samples/APC2a-e3.tif:
[testng] [2024-06-10 01:21:04,748] [pool-1-thread-10] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4:
[testng] [2024-06-10 01:21:05,262] [pool-1-thread-6] Initializing /data/jayne/AM-2/MonGb2-S8.dm3:
[testng] [2024-06-10 01:21:05,328] [pool-1-thread-2] Initializing /data/samples/mode-metadata/mode_format_test.dm3:
[testng] [2024-06-10 01:21:06,049] [pool-1-thread-11] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4:
[testng] [2024-06-10 01:21:06,163] [pool-1-thread-4] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif:
[testng] [2024-06-10 01:21:06,275] [pool-1-thread-3] Initializing /data/qa-21647/Sample2_L1-0002.dm4:
[testng] [2024-06-10 01:21:06,508] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4:
[testng] [2024-06-10 01:21:06,638] [pool-1-thread-4] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4:
[testng] [2024-06-10 01:21:06,924] [pool-1-thread-3] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4:
[testng] [2024-06-10 01:21:07,005] [pool-1-thread-4] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif:
[testng] [2024-06-10 01:21:07,403] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4:
[testng] [2024-06-10 01:21:08,443] [pool-1-thread-11] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3:
[testng] [2024-06-10 01:21:08,632] [pool-1-thread-7] Initializing /data/chip/Nanogold-1.dm3:
[testng] [2024-06-10 01:21:10,153] [pool-1-thread-3] Initializing /data/jay/smallerfile.dm3:
[testng] [2024-06-10 01:21:10,282] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4:
[testng] [2024-06-10 01:21:10,736] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4:
[testng] [2024-06-10 01:21:10,843] [pool-1-thread-3] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif:
[testng] [2024-06-10 01:21:12,413] [pool-1-thread-9] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4:
[testng] [2024-06-10 01:21:13,087] [pool-1-thread-6] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif:
[testng] [2024-06-10 01:21:13,187] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4:
[testng] [2024-06-10 01:21:13,395] [pool-1-thread-4] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4:
[testng] [2024-06-10 01:21:13,656] [pool-1-thread-2] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif:
[testng] [2024-06-10 01:21:13,750] [pool-1-thread-7] Initializing /data/jay/samples/APC2a-e4.dm3:
[testng] [2024-06-10 01:21:13,813] [pool-1-thread-4] Initializing /data/samples/test-tiles.dm3:
[testng] [2024-06-10 01:21:14,360] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4:
[testng] [2024-06-10 01:21:14,410] [pool-1-thread-4] Initializing /data/jayne/AM-2/MonGb3-S3.dm3:
[testng] [2024-06-10 01:21:14,882] [pool-1-thread-7] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif:
[testng] [2024-06-10 01:21:16,780] [pool-1-thread-6] Initializing /data/jay/samples/APC2a-e5.tif:
[testng] [2024-06-10 01:21:17,163] [pool-1-thread-4] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4:
[testng] [2024-06-10 01:21:17,986] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4:
[testng] [2024-06-10 01:21:18,575] [pool-1-thread-3] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4:
[testng] [2024-06-10 01:21:19,898] [pool-1-thread-2] Initializing /data/jay/biosamplefullframetif.tif:
[testng] [2024-06-10 01:21:20,606] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4:
[testng] [2024-06-10 01:21:20,855] [pool-1-thread-6] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3:
[testng] [2024-06-10 01:21:22,622] [pool-1-thread-7] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4:
[testng] [2024-06-10 01:21:23,001] [pool-1-thread-7] Initializing /data/jay/recAmag6500dm.dm3:
[testng] [2024-06-10 01:21:23,175] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4:
[testng] [2024-06-10 01:21:23,693] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4:
[testng] [2024-06-10 01:21:23,880] [pool-1-thread-5] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4:
[testng] [2024-06-10 01:21:24,350] [pool-1-thread-5] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif:
[testng] [2024-06-10 01:21:25,281] [pool-1-thread-6] Initializing /data/jayne/AM-2/MonGb2-S9.dm3:
[testng] [2024-06-10 01:21:26,631] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4:
[testng] [2024-06-10 01:21:26,948] [pool-1-thread-2] Initializing /data/jay/DMtest.dm3:
[testng] [2024-06-10 01:21:26,965] [pool-1-thread-12] Initializing /data/jayne/AM-2/MonGb2-S7.dm3:
[testng] [2024-06-10 01:21:28,016] [pool-1-thread-1] Initializing /data/jayne/AM-2/MonGb3-S1.dm3:
[testng] [2024-06-10 01:21:28,867] [pool-1-thread-11] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4:
[testng] [2024-06-10 01:21:28,952] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4:
[testng] [2024-06-10 01:21:29,498] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4:
[testng] [2024-06-10 01:21:30,108] [pool-1-thread-12] Initializing /data/jay/dnasample.tif:
[testng] [2024-06-10 01:21:30,415] [pool-1-thread-6] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif:
[testng] [2024-06-10 01:21:30,625] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4:
[testng] [2024-06-10 01:21:30,903] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4:
[testng] [2024-06-10 01:21:31,016] [pool-1-thread-7] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif:
[testng] [2024-06-10 01:21:32,069] [pool-1-thread-5] Initializing /data/jay/samples/APC2a-e4.tif:
[testng] [2024-06-10 01:21:32,240] [pool-1-thread-7] Initializing /data/jay/graphitedm3.dm3:
[testng] [2024-06-10 01:21:32,514] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 5194, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 1 minute 11 seconds
Finished: SUCCESS