Started by upstream project "BIOFORMATS-test-repo" build number 89
originally caused by:
Started by upstream project "Trigger" build number 100
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@4
[BIOFORMATS-test-folder@4] $ /bin/bash -xe /tmp/jenkins767325056553158688.sh
+ '[' apng = slidebook ']'
++ date +%u
+ '[' 2 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_13712_merge_ci -v /uod/idr/repos/curated/apng:/data -v /uod/idr-scratch/merge-ci/curated/apng:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] WARNING: An illegal reflective access operation has occurred
[testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket
[testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener
[testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
[testng] WARNING: All illegal access operations will be denied in a future release
[testng] File leak detector installed
[testng] 02:19:24,608 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 02:19:24,610 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - No custom configurators were discovered as a service.
[testng] 02:19:24,610 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 02:19:24,611 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 02:19:24,612 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 02:19:24,612 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 02:19:24,612 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 02:19:24,612 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 02:19:24,613 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 02:19:24,613 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 02:19:24,614 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 02:19:24,614 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 02:19:24,800 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 02:19:24,800 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 02:19:24,824 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 02:19:24,824 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 02:19:24,830 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 02:19:24,830 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 02:19:24,831 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 02:19:24,831 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 02:19:24,831 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2794eab6 - End of configuration.
[testng] 02:19:24,832 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6c1a5b54 - Registering current configuration as safe fallback point
[testng] 02:19:24,832 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 219 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-06-11 02:19:24,842] [main] java.version = 11.0.16
[testng] 02:19:24,845 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 02:19:24,845 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:19:24,893 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-11_02-19-24.log]
[testng] 02:19:24,895 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642a7222 - End of configuration.
[testng] [2024-06-11 02:19:24,898] [main] testng.directory = /data
[testng] [2024-06-11 02:19:24,898] [main] testng.configDirectory = /config
[testng] [2024-06-11 02:19:24,912] [main] testng.multiplier = 1.0
[testng] [2024-06-11 02:19:24,914] [main] testng.in-memory = false
[testng] [2024-06-11 02:19:24,914] [main] testng.allow-missing = false
[testng] [2024-06-11 02:19:24,914] [main] user.language = en
[testng] [2024-06-11 02:19:24,914] [main] user.country = ${user.country}
[testng] [2024-06-11 02:19:24,914] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-06-11 02:19:25,389] [main] ----------------------------------------
[testng] [2024-06-11 02:19:25,389] [main] Total files: 21
[testng] [2024-06-11 02:19:25,389] [main] Scan time: 0.475 s (22 ms/file)
[testng] [2024-06-11 02:19:25,390] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 21 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-06-11 02:19:27,220] [pool-1-thread-1] Initializing /data/samples/MoonPhases.png:
[testng] 02:19:27,220 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 02:19:27,221 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:19:27,222 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-11_02-19-27.log]
[testng] 02:19:27,223 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5077f501 - End of configuration.
[testng] [2024-06-11 02:19:27,273] [pool-1-thread-12] Initializing /data/colin/test.sfstdge.png:
[testng] 02:19:27,273 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 02:19:27,273 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:19:27,275 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-06-11_02-19-27.log]
[testng] 02:19:27,275 |-INFO in ch.qos.logback.core.sift.SiftProcessor@444b00a8 - End of configuration.
[testng] [2024-06-11 02:19:27,280] [pool-1-thread-11] Initializing /data/samples/phug_logo.png:
[testng] 02:19:27,280 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 02:19:27,280 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:19:27,281 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-11_02-19-27.log]
[testng] 02:19:27,281 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4da3e5e3 - End of configuration.
[testng] [2024-06-11 02:19:27,288] [pool-1-thread-10] Initializing /data/samples/orbit.png:
[testng] 02:19:27,288 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 02:19:27,288 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:19:27,289 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-11_02-19-27.log]
[testng] 02:19:27,290 |-INFO in ch.qos.logback.core.sift.SiftProcessor@52951558 - End of configuration.
[testng] [2024-06-11 02:19:27,298] [pool-1-thread-9] Initializing /data/samples/william_wong02.png:
[testng] 02:19:27,298 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 02:19:27,298 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:19:27,299 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-11_02-19-27.log]
[testng] 02:19:27,299 |-INFO in ch.qos.logback.core.sift.SiftProcessor@be04934 - End of configuration.
[testng] [2024-06-11 02:19:27,308] [pool-1-thread-8] Initializing /data/samples/Sun.png:
[testng] 02:19:27,308 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 02:19:27,308 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:19:27,309 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-11_02-19-27.log]
[testng] 02:19:27,309 |-INFO in ch.qos.logback.core.sift.SiftProcessor@10fd546 - End of configuration.
[testng] [2024-06-11 02:19:27,319] [pool-1-thread-7] Initializing /data/samples/joanna_viera01.png:
[testng] 02:19:27,319 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 02:19:27,319 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:19:27,320 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-11_02-19-27.log]
[testng] 02:19:27,321 |-INFO in ch.qos.logback.core.sift.SiftProcessor@b128357 - End of configuration.
[testng] [2024-06-11 02:19:27,327] [pool-1-thread-6] Initializing /data/samples/StarV838.png:
[testng] 02:19:27,327 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 02:19:27,327 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:19:27,328 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-11_02-19-27.log]
[testng] 02:19:27,329 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7bfadff2 - End of configuration.
[testng] [2024-06-11 02:19:27,336] [pool-1-thread-5] Initializing /data/samples/PhugAnimation3.png:
[testng] 02:19:27,336 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 02:19:27,336 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:19:27,337 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-11_02-19-27.log]
[testng] 02:19:27,338 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1778f7e0 - End of configuration.
[testng] [2024-06-11 02:19:27,346] [pool-1-thread-4] Initializing /data/samples/daniel_coltri_two.png:
[testng] 02:19:27,346 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 02:19:27,346 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:19:27,347 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-11_02-19-27.log]
[testng] 02:19:27,347 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4c3fdfa4 - End of configuration.
[testng] [2024-06-11 02:19:27,352] [pool-1-thread-3] Initializing /data/samples/chompy2.png:
[testng] 02:19:27,352 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 02:19:27,352 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:19:27,353 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-11_02-19-27.log]
[testng] 02:19:27,353 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7fdba07f - End of configuration.
[testng] [2024-06-11 02:19:27,359] [pool-1-thread-2] Initializing /data/samples/spinfox.png:
[testng] 02:19:27,360 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 02:19:27,360 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:19:27,361 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-11_02-19-27.log]
[testng] 02:19:27,361 |-INFO in ch.qos.logback.core.sift.SiftProcessor@15c5039c - End of configuration.
[testng] [2024-06-11 02:19:28,441] [pool-1-thread-7] Initializing /data/qa-7473/n.tif:
[testng] [2024-06-11 02:19:28,477] [pool-1-thread-4] Initializing /data/samples/Matrix.png:
[testng] [2024-06-11 02:19:28,481] [pool-1-thread-12] Initializing /data/samples/daniel_coltri_one.png:
[testng] [2024-06-11 02:19:28,976] [pool-1-thread-3] Initializing /data/qa-7473/x.png:
[testng] [2024-06-11 02:19:28,980] [pool-1-thread-2] Initializing /data/samples/monkey_apng.png:
[testng] [2024-06-11 02:19:28,987] [pool-1-thread-1] Initializing /data/samples/atom.png:
[testng] [2024-06-11 02:19:28,990] [pool-1-thread-5] Initializing /data/samples/william_wong05.png:
[testng] [2024-06-11 02:19:28,995] [pool-1-thread-8] Initializing /data/samples/william_wong04.png:
[testng] [2024-06-11 02:19:29,001] [pool-1-thread-6] Initializing /data/samples/william_wong01.png:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 1113, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 7 seconds
Finished: SUCCESS