Started by upstream project "<a href='/jenkins/job/BIOFORMATS-test-repo/' class='jenkins-table__link model-link model-link--float'>BIOFORMATS-test-repo</a>" build number <a href='/jenkins/job/BIOFORMATS-test-repo/9' class='jenkins-table__link model-link model-link--float'>9</a>
originally caused by:
 Started by upstream project "<a href='/jenkins/job/Trigger/' class='jenkins-table__link model-link model-link--float'>Trigger</a>" build number <a href='/jenkins/job/Trigger/12' class='jenkins-table__link model-link model-link--float'>12</a>
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on <a href='/jenkins/computer/docker' class='jenkins-table__link model-link model-link--float'>docker</a> (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder
[BIOFORMATS-test-folder] $ /bin/bash -xe /tmp/jenkins13479586962610481557.sh
+ '[' nrrd = slidebook ']'
++ date +%u
+ '[' 6 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_1393_merge_ci -v /uod/idr/repos/curated/nrrd:/data -v /uod/idr-scratch/merge-ci/curated/nrrd:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] WARNING: An illegal reflective access operation has occurred
   [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket
   [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener
   [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
   [testng] WARNING: All illegal access operations will be denied in a future release
   [testng] File leak detector installed
   [testng] 01:34:47,135 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 01:34:47,137 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - No custom configurators were discovered as a service.
   [testng] 01:34:47,137 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:34:47,138 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:34:47,138 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 01:34:47,139 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 01:34:47,139 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 01:34:47,139 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:34:47,140 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:34:47,140 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 01:34:47,141 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 01:34:47,141 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 01:34:47,324 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 01:34:47,324 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 01:34:47,346 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 01:34:47,346 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 01:34:47,352 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 01:34:47,352 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 01:34:47,352 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 01:34:47,353 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 01:34:47,353 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2794eab6 - End of configuration.
   [testng] 01:34:47,353 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6c1a5b54 - Registering current configuration as safe fallback point
   [testng] 01:34:47,353 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 213 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-03-23 01:34:47,363] [main] java.version = 11.0.16
   [testng] 01:34:47,366 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 01:34:47,366 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:34:47,410 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-03-23_01-34-47.log]
   [testng] 01:34:47,411 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642a7222 - End of configuration.
   [testng] [2024-03-23 01:34:47,413] [main] testng.directory = /data
   [testng] [2024-03-23 01:34:47,414] [main] testng.configDirectory = /config
   [testng] [2024-03-23 01:34:47,424] [main] testng.multiplier = 1.0
   [testng] [2024-03-23 01:34:47,426] [main] testng.in-memory = false
   [testng] [2024-03-23 01:34:47,426] [main] testng.allow-missing = false
   [testng] [2024-03-23 01:34:47,426] [main] user.language = en
   [testng] [2024-03-23 01:34:47,426] [main] user.country = ${user.country}
   [testng] [2024-03-23 01:34:47,426] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-03-23 01:36:30,173] [main] ----------------------------------------
   [testng] [2024-03-23 01:36:30,173] [main] Total files: 14
   [testng] [2024-03-23 01:36:30,173] [main] Scan time: 102.747 s (7339 ms/file)
   [testng] [2024-03-23 01:36:30,174] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 10 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-03-23 01:36:32,501] [pool-1-thread-1] Initializing /data/public/glencoe/version4/dt-helix.nhdr: 
   [testng] 01:36:32,502 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 01:36:32,502 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:36:32,504 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-03-23_01-36-32.log]
   [testng] 01:36:32,504 |-INFO in ch.qos.logback.core.sift.SiftProcessor@59291280 - End of configuration.
   [testng] [2024-03-23 01:36:32,751] [pool-1-thread-10] Initializing /data/public/glencoe/gzip/dt-helix.nrrd.gz: 
   [testng] 01:36:32,751 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 01:36:32,752 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:36:32,753 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-03-23_01-36-32.log]
   [testng] 01:36:32,753 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3237e81a - End of configuration.
   [testng] [2024-03-23 01:36:32,971] [pool-1-thread-9] Initializing /data/public/gordon/dt-helix.nhdr: 
   [testng] 01:36:32,972 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 01:36:32,972 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:36:32,972 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-03-23_01-36-32.log]
   [testng] 01:36:32,973 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7d3dcf78 - End of configuration.
   [testng] [2024-03-23 01:36:33,047] [pool-1-thread-8] Initializing /data/public/gordon/gk2-rcc-mask.nhdr: 
   [testng] 01:36:33,047 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 01:36:33,047 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:36:33,048 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-03-23_01-36-33.log]
   [testng] 01:36:33,049 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2f25fab - End of configuration.
   [testng] [2024-03-23 01:36:33,128] [pool-1-thread-7] Initializing /data/public/gordon/gk2-rcc-mask2.nhdr: 
   [testng] 01:36:33,128 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 01:36:33,129 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:36:33,129 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-03-23_01-36-33.log]
   [testng] 01:36:33,130 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6a07f6ad - End of configuration.
   [testng] [2024-03-23 01:36:33,211] [pool-1-thread-6] Initializing /data/greg/average-goodbrains-warp40-5_e1e-2.PIC.gz.nhdr: 
   [testng] 01:36:33,211 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 01:36:33,211 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:36:33,212 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-03-23_01-36-33.log]
   [testng] 01:36:33,212 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2fb92bee - End of configuration.
   [testng] [2024-03-23 01:36:33,313] [pool-1-thread-5] Initializing /data/greg/average-goodbrains-warp40-5_e1e-2.am.nrrd: 
   [testng] 01:36:33,313 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 01:36:33,313 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:36:33,314 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-03-23_01-36-33.log]
   [testng] 01:36:33,314 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4cb033df - End of configuration.
   [testng] [2024-03-23 01:36:33,447] [pool-1-thread-4] Initializing /data/greg/average-goodbrains-warp40-5_e1e-2.PIC.nhdr: 
   [testng] 01:36:33,448 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 01:36:33,448 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:36:33,448 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-03-23_01-36-33.log]
   [testng] 01:36:33,449 |-INFO in ch.qos.logback.core.sift.SiftProcessor@75ede63e - End of configuration.
   [testng] [2024-03-23 01:36:33,525] [pool-1-thread-3] Initializing /data/carlos/big4DImage.nrrd: 
   [testng] 01:36:33,525 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 01:36:33,525 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:36:33,526 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-03-23_01-36-33.log]
   [testng] 01:36:33,526 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7147df0c - End of configuration.
   [testng] [2024-03-23 01:36:33,695] [pool-1-thread-2] Initializing /data/public/midas/01011-dwi.nhdr: 
   [testng] 01:36:33,696 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 01:36:33,696 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:36:33,696 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-03-23_01-36-33.log]
   [testng] 01:36:33,697 |-INFO in ch.qos.logback.core.sift.SiftProcessor@66e9d90d - End of configuration.
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 530, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 3 minutes 32 seconds
Finished: SUCCESS