Started by upstream project "BIOFORMATS-test-repo" build number 92
originally caused by:
 Started by upstream project "Trigger" build number 103
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@9
[BIOFORMATS-test-folder@9] $ /bin/bash -xe /tmp/jenkins10483256119209240271.sh
+ '[' analyze = slidebook ']'
++ date +%u
+ '[' 5 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_14190_merge_ci -v /uod/idr/repos/curated/analyze:/data -v /uod/idr-scratch/merge-ci/curated/analyze:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test

test-automated:
   [testng] File leak detector installed
   [testng] 02:20:48,659 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 02:20:48,661 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service.
   [testng] 02:20:48,661 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 02:20:48,662 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 02:20:48,662 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 02:20:48,662 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 02:20:48,663 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 02:20:48,663 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 02:20:48,663 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 02:20:48,663 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 02:20:48,663 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 02:20:48,664 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 02:20:48,927 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 02:20:48,927 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 02:20:48,958 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 02:20:48,958 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 02:20:48,966 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 02:20:48,966 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 02:20:48,967 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 02:20:48,967 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 02:20:48,967 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration.
   [testng] 02:20:48,968 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point
   [testng] 02:20:48,968 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 305 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-06-14 02:20:48,978] [main] java.version = 1.8.0_342
   [testng] 02:20:48,982 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 02:20:48,982 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:20:49,028 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-14_02-20-48.log]
   [testng] 02:20:49,030 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
   [testng] [2024-06-14 02:20:49,032] [main] testng.directory = /data
   [testng] [2024-06-14 02:20:49,032] [main] testng.configDirectory = /config
   [testng] [2024-06-14 02:20:49,045] [main] testng.multiplier = 1.0
   [testng] [2024-06-14 02:20:49,046] [main] testng.in-memory = false
   [testng] [2024-06-14 02:20:49,046] [main] testng.allow-missing = false
   [testng] [2024-06-14 02:20:49,046] [main] user.language = en
   [testng] [2024-06-14 02:20:49,046] [main] user.country = ${user.country}
   [testng] [2024-06-14 02:20:49,046] [main] Maximum heap size = 13653 MB
   [testng] Scanning for files...
   [testng] [2024-06-14 02:20:49,730] [main] ----------------------------------------
   [testng] [2024-06-14 02:20:49,730] [main] Total files: 21
   [testng] [2024-06-14 02:20:49,730] [main] Scan time: 0.684 s (32 ms/file)
   [testng] [2024-06-14 02:20:49,730] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 21 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-06-14 02:20:50,958] [pool-1-thread-1] Initializing /data/frans/Test Files for Frans/PLA-zm2-16mm_1002_MF_V1.hdr: 
   [testng] 02:20:50,959 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 02:20:50,959 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:20:50,960 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-14_02-20-50.log]
   [testng] 02:20:50,960 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2112cba0 - End of configuration.
   [testng] [2024-06-14 02:20:51,020] [pool-1-thread-12] Initializing /data/frans/CT_HAND.hdr: 
   [testng] 02:20:51,021 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 02:20:51,021 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:20:51,022 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-06-14_02-20-51.log]
   [testng] 02:20:51,023 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6f45a939 - End of configuration.
   [testng] [2024-06-14 02:20:51,074] [pool-1-thread-11] Initializing /data/frans/brodmann.hdr: 
   [testng] 02:20:51,075 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 02:20:51,075 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:20:51,076 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-14_02-20-51.log]
   [testng] 02:20:51,076 |-INFO in ch.qos.logback.core.sift.SiftProcessor@26b09b2 - End of configuration.
   [testng] [2024-06-14 02:20:51,111] [pool-1-thread-10] Initializing /data/frans/aal.hdr: 
   [testng] 02:20:51,111 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 02:20:51,111 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:20:51,113 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-14_02-20-51.log]
   [testng] 02:20:51,113 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7717f9e4 - End of configuration.
   [testng] [2024-06-14 02:20:51,132] [pool-1-thread-9] Initializing /data/frans/Test Files for Frans/06-101-mask-40pc2dil.hdr: 
   [testng] 02:20:51,133 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 02:20:51,133 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:20:51,134 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-14_02-20-51.log]
   [testng] 02:20:51,135 |-INFO in ch.qos.logback.core.sift.SiftProcessor@755508aa - End of configuration.
   [testng] [2024-06-14 02:20:51,155] [pool-1-thread-8] Initializing /data/frans/Test Files for Frans/200-PLA_sansBD_spmT_0005.hdr: 
   [testng] 02:20:51,156 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 02:20:51,156 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:20:51,157 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-14_02-20-51.log]
   [testng] 02:20:51,157 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1bed4884 - End of configuration.
   [testng] [2024-06-14 02:20:51,177] [pool-1-thread-7] Initializing /data/frans/betmask.hdr: 
   [testng] 02:20:51,178 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 02:20:51,178 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:20:51,184 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-14_02-20-51.log]
   [testng] 02:20:51,185 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13db8294 - End of configuration.
   [testng] [2024-06-14 02:20:51,201] [pool-1-thread-6] Initializing /data/frans/CT_WHOLE.hdr: 
   [testng] 02:20:51,201 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 02:20:51,201 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:20:51,202 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-14_02-20-51.log]
   [testng] 02:20:51,203 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5a06bfa4 - End of configuration.
   [testng] [2024-06-14 02:20:51,220] [pool-1-thread-5] Initializing /data/frans/MR_SEGBRAIN.hdr: 
   [testng] 02:20:51,221 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 02:20:51,221 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:20:51,222 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-14_02-20-51.log]
   [testng] 02:20:51,222 |-INFO in ch.qos.logback.core.sift.SiftProcessor@60a8d175 - End of configuration.
   [testng] [2024-06-14 02:20:51,239] [pool-1-thread-4] Initializing /data/frans/CT_FOOT.hdr: 
   [testng] 02:20:51,239 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 02:20:51,239 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:20:51,240 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-14_02-20-51.log]
   [testng] 02:20:51,241 |-INFO in ch.qos.logback.core.sift.SiftProcessor@568c8ef5 - End of configuration.
   [testng] [2024-06-14 02:20:51,258] [pool-1-thread-3] Initializing /data/frans/ch2bet.hdr: 
   [testng] 02:20:51,258 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 02:20:51,258 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:20:51,259 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-14_02-20-51.log]
   [testng] 02:20:51,260 |-INFO in ch.qos.logback.core.sift.SiftProcessor@530eb4ff - End of configuration.
   [testng] [2024-06-14 02:20:51,305] [pool-1-thread-2] Initializing /data/frans/MR_CHEST.hdr: 
   [testng] 02:20:51,305 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 02:20:51,305 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:20:51,306 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-14_02-20-51.log]
   [testng] 02:20:51,307 |-INFO in ch.qos.logback.core.sift.SiftProcessor@58f5c944 - End of configuration.
   [testng] [2024-06-14 02:20:53,182] [pool-1-thread-8] Initializing /data/frans/CT_CRANI.hdr: 
   [testng] [2024-06-14 02:20:53,192] [pool-1-thread-6] Initializing /data/frans/eNlf-02-05-08-rats25-28_v1.img.hdr: 
   [testng] [2024-06-14 02:20:53,203] [pool-1-thread-5] Initializing /data/frans/CT_KNEE.hdr: 
   [testng] [2024-06-14 02:20:53,215] [pool-1-thread-3] Initializing /data/frans/m000-MR_CHEST.gif: 
   [testng] [2024-06-14 02:20:53,252] [pool-1-thread-11] Initializing /data/frans/CT_APERT.hdr: 
   [testng] [2024-06-14 02:20:53,265] [pool-1-thread-12] Initializing /data/frans/CT_CHEST.hdr: 
   [testng] [2024-06-14 02:20:53,274] [pool-1-thread-10] Initializing /data/frans/Test Files for Frans/F005_1002_MF_SCAN1_stat_brain_fdg_JJ_Volume_Corrected.hdr: 
   [testng] [2024-06-14 02:20:53,288] [pool-1-thread-2] Initializing /data/frans/ch2.hdr: 
   [testng] [2024-06-14 02:20:53,301] [pool-1-thread-4] Initializing /data/frans/Test Files for Frans/1002-sag-transform-box-est_flip-ord.hdr: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 1113, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 8 seconds
Finished: SUCCESS