Started by upstream project "BIOFORMATS-test-repo" build number 93
originally caused by:
Started by upstream project "Trigger" build number 104
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8
[BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins1051193598174140400.sh
+ '[' olympus-oir = slidebook ']'
++ date +%u
+ '[' 6 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_14252_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] WARNING: An illegal reflective access operation has occurred
[testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket
[testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener
[testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
[testng] WARNING: All illegal access operations will be denied in a future release
[testng] File leak detector installed
[testng] 01:21:06,202 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 01:21:06,205 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - No custom configurators were discovered as a service.
[testng] 01:21:06,205 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:21:06,207 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:21:06,208 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 01:21:06,209 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 01:21:06,210 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 3 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 01:21:06,210 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:21:06,211 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:21:06,212 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 01:21:06,213 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 01:21:06,213 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 01:21:06,480 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 01:21:06,480 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 01:21:06,515 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 01:21:06,515 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 01:21:06,524 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 01:21:06,524 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 01:21:06,524 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 01:21:06,525 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 01:21:06,525 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2794eab6 - End of configuration.
[testng] 01:21:06,527 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6c1a5b54 - Registering current configuration as safe fallback point
[testng] 01:21:06,527 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 316 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-06-15 01:21:06,542] [main] java.version = 11.0.16
[testng] 01:21:06,547 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 01:21:06,547 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:21:06,617 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-15_01-21-06.log]
[testng] 01:21:06,621 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642a7222 - End of configuration.
[testng] [2024-06-15 01:21:06,625] [main] testng.directory = /data
[testng] [2024-06-15 01:21:06,626] [main] testng.configDirectory = /config
[testng] [2024-06-15 01:21:06,644] [main] testng.multiplier = 1.0
[testng] [2024-06-15 01:21:06,646] [main] testng.in-memory = false
[testng] [2024-06-15 01:21:06,647] [main] testng.allow-missing = false
[testng] [2024-06-15 01:21:06,647] [main] user.language = en
[testng] [2024-06-15 01:21:06,647] [main] user.country = ${user.country}
[testng] [2024-06-15 01:21:06,647] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-06-15 01:21:20,807] [main] ----------------------------------------
[testng] [2024-06-15 01:21:20,808] [main] Total files: 283
[testng] [2024-06-15 01:21:20,808] [main] Scan time: 14.16 s (50 ms/file)
[testng] [2024-06-15 01:21:20,808] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 186 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-06-15 01:30:14,977] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir:
[testng] 01:30:14,978 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 01:30:14,979 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:30:14,981 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-15_01-30-14.log]
[testng] 01:30:14,981 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5b787753 - End of configuration.
[testng] [2024-06-15 01:30:15,356] [pool-1-thread-12] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.ome.tif:
[testng] 01:30:15,356 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 01:30:15,356 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:30:15,357 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-06-15_01-30-15.log]
[testng] 01:30:15,357 |-INFO in ch.qos.logback.core.sift.SiftProcessor@580a52c2 - End of configuration.
[testng] [2024-06-15 01:30:15,448] [pool-1-thread-11] Initializing /data/qa-16881/P10-50 D2_0019.oir:
[testng] 01:30:15,448 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 01:30:15,448 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:30:15,449 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-15_01-30-15.log]
[testng] 01:30:15,449 |-INFO in ch.qos.logback.core.sift.SiftProcessor@d5f692c - End of configuration.
[testng] [2024-06-15 01:30:15,667] [pool-1-thread-10] Initializing /data/qa-16881/P10D1 20150729.ome.tif:
[testng] 01:30:15,667 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 01:30:15,667 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:30:15,668 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-15_01-30-15.log]
[testng] 01:30:15,668 |-INFO in ch.qos.logback.core.sift.SiftProcessor@d24c5c6 - End of configuration.
[testng] [2024-06-15 01:30:15,767] [pool-1-thread-9] Initializing /data/olympus/_stitched 4x4 zstack 10X_XYZ_/stack1/frame_t_0.ets:
[testng] 01:30:15,767 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 01:30:15,767 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:30:15,768 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-15_01-30-15.log]
[testng] 01:30:15,768 |-INFO in ch.qos.logback.core.sift.SiftProcessor@42745132 - End of configuration.
[testng] [2024-06-15 01:30:15,796] [pool-1-thread-8] Initializing /data/olympus/Clipboard-calcium sparks_XYt.tif:
[testng] 01:30:15,797 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 01:30:15,797 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:30:15,797 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-15_01-30-15.log]
[testng] 01:30:15,798 |-INFO in ch.qos.logback.core.sift.SiftProcessor@298c59bd - End of configuration.
[testng] [2024-06-15 01:30:15,868] [pool-1-thread-7] Initializing /data/qa-16881/W11-180 D3 20151021_0024.oir:
[testng] 01:30:15,868 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 01:30:15,868 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:30:15,869 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-15_01-30-15.log]
[testng] 01:30:15,870 |-INFO in ch.qos.logback.core.sift.SiftProcessor@17678e86 - End of configuration.
[testng] [2024-06-15 01:30:16,046] [pool-1-thread-6] Initializing /data/qa-17270/alexa488.ome.tif:
[testng] 01:30:16,046 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 01:30:16,046 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:30:16,047 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-15_01-30-16.log]
[testng] 01:30:16,047 |-INFO in ch.qos.logback.core.sift.SiftProcessor@561a9cd6 - End of configuration.
[testng] [2024-06-15 01:30:16,106] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif:
[testng] 01:30:16,106 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 01:30:16,106 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:30:16,107 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-15_01-30-16.log]
[testng] 01:30:16,107 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6652759a - End of configuration.
[testng] [2024-06-15 01:30:16,171] [pool-1-thread-4] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info:
[testng] 01:30:16,171 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 01:30:16,171 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:30:16,172 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-15_01-30-16.log]
[testng] 01:30:16,172 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4284c8f7 - End of configuration.
[testng] [2024-06-15 01:30:20,470] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir:
[testng] 01:30:20,471 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 01:30:20,471 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:30:20,472 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-15_01-30-20.log]
[testng] 01:30:20,473 |-INFO in ch.qos.logback.core.sift.SiftProcessor@490c0237 - End of configuration.
[testng] [2024-06-15 01:30:20,614] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif:
[testng] 01:30:20,615 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 01:30:20,615 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:30:20,616 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-15_01-30-20.log]
[testng] 01:30:20,617 |-INFO in ch.qos.logback.core.sift.SiftProcessor@277c7b21 - End of configuration.
[testng] [2024-06-15 01:30:25,753] [pool-1-thread-5] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif:
[testng] [2024-06-15 01:30:26,184] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-Caged Glu-3 point.tif:
[testng] [2024-06-15 01:30:26,854] [pool-1-thread-2] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir:
[testng] [2024-06-15 01:30:27,908] [pool-1-thread-8] Initializing /data/olympus/2017-04-20/mito_0006_0001.oir:
[testng] [2024-06-15 01:30:28,072] [pool-1-thread-3] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir:
[testng] [2024-06-15 01:30:28,295] [pool-1-thread-10] Initializing /data/public/etienne/venus stack.ome.tif:
[testng] [2024-06-15 01:30:28,499] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0024.tif:
[testng] [2024-06-15 01:30:28,592] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif:
[testng] [2024-06-15 01:30:28,824] [pool-1-thread-11] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir:
[testng] [2024-06-15 01:30:29,153] [pool-1-thread-9] Initializing /data/public/etienne/amy slice z stack_0001.oir:
[testng] [2024-06-15 01:30:30,422] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir:
[testng] [2024-06-15 01:30:31,213] [pool-1-thread-8] Initializing /data/olympus/calcium sparks_XYt.ome.tif:
[testng] [2024-06-15 01:30:31,770] [pool-1-thread-7] Initializing /data/qa-17919/f10187.oir:
[testng] [2024-06-15 01:30:50,090] [pool-1-thread-5] Initializing /data/public/etienne/venus stack.oir:
[testng] [2024-06-15 01:30:50,488] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif:
[testng] [2024-06-15 01:30:50,556] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Clipboard-Image_0033_0001.tif:
[testng] [2024-06-15 01:30:50,654] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif:
[testng] [2024-06-15 01:30:50,791] [pool-1-thread-10] Initializing /data/qa-17331/60x zstack RS.oir:
[testng] [2024-06-15 01:30:51,056] [pool-1-thread-12] Initializing /data/qa-17331/60x zstack RS.ome.tif:
[testng] [2024-06-15 01:30:51,672] [pool-1-thread-1] Initializing /data/olympus/XYZt.vsi:
[testng] [2024-06-15 01:30:52,329] [pool-1-thread-9] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi:
[testng] [2024-06-15 01:30:52,577] [pool-1-thread-6] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi:
[testng] [2024-06-15 01:30:52,862] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.oir:
[testng] [2024-06-15 01:30:53,395] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif:
[testng] [2024-06-15 01:30:53,636] [pool-1-thread-10] Initializing /data/qa-17270/stack1.oir:
[testng] [2024-06-15 01:30:55,703] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif:
[testng] [2024-06-15 01:30:56,018] [pool-1-thread-2] Initializing /data/qa-16881/P10D1 20150729.oir:
[testng] [2024-06-15 01:30:56,397] [pool-1-thread-5] Initializing /data/cudmore/20190401__0005.oir:
[testng] [2024-06-15 01:31:01,472] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-W4-0 D14 New 20150828_0007.tif:
[testng] [2024-06-15 01:31:01,517] [pool-1-thread-6] Initializing /data/qa-16881/W11-180 D3 20151021_0006.oir:
[testng] [2024-06-15 01:31:02,256] [pool-1-thread-9] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0001.tif:
[testng] [2024-06-15 01:31:02,520] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir:
[testng] [2024-06-15 01:31:02,737] [pool-1-thread-11] Initializing /data/qa-17270/stack1.ome.tif:
[testng] [2024-06-15 01:31:03,227] [pool-1-thread-1] Initializing /data/qa-17331/Clipboard.tif:
[testng] [2024-06-15 01:31:03,301] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif:
[testng] [2024-06-15 01:31:03,350] [pool-1-thread-8] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi:
[testng] [2024-06-15 01:31:03,502] [pool-1-thread-6] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir:
[testng] [2024-06-15 01:31:03,756] [pool-1-thread-2] Initializing /data/qa-16881/W11-180 D3 20151021_0024.ome.tif:
[testng] [2024-06-15 01:31:04,799] [pool-1-thread-9] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif:
[testng] [2024-06-15 01:31:04,939] [pool-1-thread-1] Initializing /data/qa-16881/P10-50 D2.oir:
[testng] [2024-06-15 01:31:05,238] [pool-1-thread-12] Initializing /data/olympus/XYZt.ome.tif:
[testng] [2024-06-15 01:31:05,472] [pool-1-thread-11] Initializing /data/olympus/2021-04-20/overview 2 x_Cycle_01/matl.omp2info:
[testng] [2024-06-15 01:31:05,887] [pool-1-thread-2] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/matl.omp2info:
[testng] [2024-06-15 01:31:07,875] [pool-1-thread-8] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.ome.tif:
[testng] [2024-06-15 01:31:07,958] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.ome.tif:
[testng] [2024-06-15 01:31:08,323] [pool-1-thread-9] Initializing /data/olympus/XYZt.oir:
[testng] [2024-06-15 01:31:09,475] [pool-1-thread-1] Initializing /data/qa-17335/Clipboard-1.tif:
[testng] [2024-06-15 01:31:09,711] [pool-1-thread-6] Initializing /data/qa-16871/XY_0003.oir:
[testng] [2024-06-15 01:31:10,845] [pool-1-thread-10] Initializing /data/olympus/40X_4CH_XY.oir:
[testng] [2024-06-15 01:31:11,038] [pool-1-thread-8] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0019.tif:
[testng] [2024-06-15 01:31:11,123] [pool-1-thread-6] Initializing /data/qa-17270/alexa488.oir:
[testng] [2024-06-15 01:31:11,342] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.ome.tif:
[testng] [2024-06-15 01:31:11,539] [pool-1-thread-1] Initializing /data/qa-16881/Clipboard-P10-50 D2_0019.tif:
[testng] [2024-06-15 01:31:11,819] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-W1-135 D6 New 20150818_0010.tif:
[testng] [2024-06-15 01:31:11,894] [pool-1-thread-3] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.ome.tif:
[testng] [2024-06-15 01:31:12,783] [pool-1-thread-8] Initializing /data/qa-17270/image1.ome.tif:
[testng] [2024-06-15 01:31:12,839] [pool-1-thread-11] Initializing /data/olympus/_calcium sparks_XYt_/stack1/frame_t_0.ets:
[testng] [2024-06-15 01:31:13,310] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.oir:
[testng] [2024-06-15 01:31:13,446] [pool-1-thread-12] Initializing /data/qa-17335/1.ome.tif:
[testng] [2024-06-15 01:31:13,506] [pool-1-thread-6] Initializing /data/qa-16881/P10-50 D2.ome.tif:
[testng] [2024-06-15 01:31:13,829] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif:
[testng] [2024-06-15 01:31:13,923] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/zebra shg.oir:
[testng] [2024-06-15 01:31:16,037] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.ome.tif:
[testng] [2024-06-15 01:31:16,125] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.oir:
[testng] [2024-06-15 01:31:16,617] [pool-1-thread-12] Initializing /data/qa-17335/OSR-Z.ome.tif:
[testng] [2024-06-15 01:31:16,698] [pool-1-thread-1] Initializing /data/qa-16881/P10D1 20150729_0024.ome.tif:
[testng] [2024-06-15 01:31:16,943] [pool-1-thread-10] Initializing /data/qa-16881/P10D1 20150729_0019.oir:
[testng] [2024-06-15 01:31:17,147] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.oir:
[testng] [2024-06-15 01:31:17,382] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif:
[testng] [2024-06-15 01:31:17,696] [pool-1-thread-8] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif:
[testng] [2024-06-15 01:31:18,193] [pool-1-thread-12] Initializing /data/qa-17270/Clipboard-stack1.tif:
[testng] [2024-06-15 01:31:18,596] [pool-1-thread-9] Initializing /data/qa-16881/Clipboard-W1-75 D11 New 20150825_0004.tif:
[testng] [2024-06-15 01:31:18,677] [pool-1-thread-11] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir:
[testng] [2024-06-15 01:31:18,856] [pool-1-thread-6] Initializing /data/olympus/Clipboard-40X_4CH_XY.tif:
[testng] [2024-06-15 01:31:18,917] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.oir:
[testng] [2024-06-15 01:31:19,450] [pool-1-thread-10] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif:
[testng] [2024-06-15 01:31:19,852] [pool-1-thread-8] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir:
[testng] [2024-06-15 01:31:20,399] [pool-1-thread-12] Initializing /data/olympus/2017-11-20/xytz_golgi/xytz_golgi.oir:
[testng] [2024-06-15 01:31:21,561] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Clipboard-Image_0001_0001.tif:
[testng] [2024-06-15 01:31:21,967] [pool-1-thread-6] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir:
[testng] [2024-06-15 01:31:22,312] [pool-1-thread-10] Initializing /data/qa-17409/Stitch_A01_G001-exported.ome.tif:
[testng] [2024-06-15 01:31:23,024] [pool-1-thread-11] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir:
[testng] [2024-06-15 01:31:26,544] [pool-1-thread-8] Initializing /data/qa-16881/Clipboard-P10-50 D2_0006.tif:
[testng] [2024-06-15 01:31:26,914] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Clipboard-Image_0091_0001.tif:
[testng] [2024-06-15 01:31:27,140] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Clipboard-Image_0079_0001.tif:
[testng] [2024-06-15 01:31:27,218] [pool-1-thread-6] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.oir:
[testng] [2024-06-15 01:31:28,429] [pool-1-thread-9] Initializing /data/qa-16881/P10D1 20150729_0019.ome.tif:
[testng] [2024-06-15 01:31:28,527] [pool-1-thread-8] Initializing /data/qa-17270/image1.oir:
[testng] [2024-06-15 01:31:28,602] [pool-1-thread-6] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/image_Cycle_02.oir:
[testng] [2024-06-15 01:31:28,896] [pool-1-thread-1] Initializing /data/qa-16881/P10-50 D2_0019.ome.tif:
[testng] [2024-06-15 01:31:29,632] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-LILY POLLEN.tif:
[testng] [2024-06-15 01:31:30,029] [pool-1-thread-9] Initializing /data/olympus/calcium sparks_XYt.oir:
[testng] [2024-06-15 01:31:30,925] [pool-1-thread-6] Initializing /data/olympus/Stitched_XYZ.ome.tif:
[testng] [2024-06-15 01:31:31,049] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.oir:
[testng] [2024-06-15 01:31:31,253] [pool-1-thread-1] Initializing /data/public/etienne/Clipboard-venus stack.tif:
[testng] [2024-06-15 01:31:32,037] [pool-1-thread-8] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0024.tif:
[testng] [2024-06-15 01:31:32,392] [pool-1-thread-10] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/matl.omp2info:
[testng] [2024-06-15 01:31:35,221] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.oir:
[testng] [2024-06-15 01:31:35,771] [pool-1-thread-8] Initializing /data/martin/20170824_JupGFP_HisRFP_wL3_30xSI_4xzoom_0p5z_A01_G001_0001.oir:
[testng] [2024-06-15 01:32:29,282] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x-1.oir.vsi:
[testng] [2024-06-15 01:32:29,468] [pool-1-thread-12] Initializing /data/qa-17335/Clipboard-stimulation_0001_LSM.tif:
[testng] [2024-06-15 01:32:29,554] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Clipboard-Image_0050_0001.tif:
[testng] [2024-06-15 01:32:29,619] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.oir:
[testng] [2024-06-15 01:32:30,442] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-PA-GFPv-2.tif:
[testng] [2024-06-15 01:32:30,580] [pool-1-thread-9] Initializing /data/qa-17922/example_multipart.oir:
[testng] [2024-06-15 01:32:51,517] [pool-1-thread-1] Initializing /data/olympus/Stitched_XYZ.vsi:
[testng] [2024-06-15 01:32:51,712] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.ome.tif:
[testng] [2024-06-15 01:32:51,919] [pool-1-thread-5] Initializing /data/olympus/Clipboard-stitched 4x4 zstack 10X_XYZ.tif:
[testng] [2024-06-15 01:32:52,130] [pool-1-thread-3] Initializing /data/qa-16881/P10-50 D2_0006.ome.tif:
[testng] [2024-06-15 01:32:52,870] [pool-1-thread-1] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.ome.tif:
[testng] [2024-06-15 01:32:52,948] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.oir:
[testng] [2024-06-15 01:32:53,053] [pool-1-thread-6] Initializing /data/qa-16881/P10D1 20150729_0024.oir:
[testng] [2024-06-15 01:32:53,419] [pool-1-thread-5] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z_CONTROL.oir:
[testng] [2024-06-15 01:32:53,910] [pool-1-thread-3] Initializing /data/qa-17335/stimulation_0001_LSM.oir:
[testng] [2024-06-15 01:32:54,443] [pool-1-thread-12] Initializing /data/olympus/40X_4CH_XY.ome.tif:
[testng] [2024-06-15 01:32:55,249] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Clipboard-Image_0099_0001.tif:
[testng] [2024-06-15 01:32:55,358] [pool-1-thread-4] Initializing /data/qa-17917/f10010.oir:
[testng] [2024-06-15 01:33:20,747] [pool-1-thread-6] Initializing /data/qa-21508/Stitch_A01_G008.oir:
[testng] [2024-06-15 01:33:21,081] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.oir:
[testng] [2024-06-15 01:33:21,626] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif:
[testng] [2024-06-15 01:33:21,802] [pool-1-thread-1] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif:
[testng] [2024-06-15 01:33:22,435] [pool-1-thread-3] Initializing /data/olympus/calcium sparks.jpg:
[testng] [2024-06-15 01:33:23,080] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/Clipboard.tif:
[testng] [2024-06-15 01:33:23,149] [pool-1-thread-5] Initializing /data/olympus/Stitched_XYZ.oir:
[testng] [2024-06-15 01:33:24,410] [pool-1-thread-1] Initializing /data/public/etienne/coupe shg stack_0001.ome.tif:
[testng] [2024-06-15 01:33:24,996] [pool-1-thread-12] Initializing /data/qa-17293/2-z-t_0001_LSM.oir:
[testng] [2024-06-15 01:33:25,616] [pool-1-thread-3] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir:
[testng] [2024-06-15 01:33:26,466] [pool-1-thread-1] Initializing /data/qa-16871/Clipboard.tif:
[testng] [2024-06-15 01:33:26,523] [pool-1-thread-12] Initializing /data/qa-17409/Clipboard.tif:
[testng] [2024-06-15 01:33:26,808] [pool-1-thread-5] Initializing /data/qa-17409/Stitch_A01_G001.oir:
[testng] [2024-06-15 01:33:28,195] [pool-1-thread-1] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png:
[testng] [2024-06-15 01:33:28,326] [pool-1-thread-12] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif:
[testng] [2024-06-15 01:33:28,504] [pool-1-thread-1] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir:
[testng] [2024-06-15 01:33:29,182] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif:
[testng] [2024-06-15 01:33:29,238] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-P10D1 20150729.tif:
[testng] [2024-06-15 01:33:30,166] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif:
[testng] [2024-06-15 01:33:30,240] [pool-1-thread-11] Initializing /data/qa-17335/OSR-Z.oir:
[testng] [2024-06-15 01:33:30,438] [pool-1-thread-3] Initializing /data/qa-17270/Clipboard-image1.tif:
[testng] [2024-06-15 01:33:31,458] [pool-1-thread-11] Initializing /data/qa-17293/Clipboard.tif:
[testng] [2024-06-15 01:33:31,512] [pool-1-thread-12] Initializing /data/qa-18802/20171020_JupGFPHisRFP_L3_30xSI_galvo_p5z_p1xy_better_than_nyquist.oir:
[testng] [2024-06-15 01:33:32,212] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir:
[testng] [2024-06-15 01:33:32,494] [pool-1-thread-3] Initializing /data/public/etienne/coupe shg stack_0001.oir:
[testng] [2024-06-15 01:33:33,171] [pool-1-thread-5] Initializing /data/qa-17335/1.oir:
[testng] [2024-06-15 01:33:33,565] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.oir:
[testng] [2024-06-15 01:33:34,348] [pool-1-thread-11] Initializing /data/qa-16881/P10-50 D2_0006.oir:
[testng] [2024-06-15 01:33:34,538] [pool-1-thread-5] Initializing /data/qa-17293/2-z-t_0001_LSM.ome.tif:
[testng] [2024-06-15 01:33:34,749] [pool-1-thread-1] Initializing /data/olympus/40X_4CH_XY.vsi:
[testng] [2024-06-15 01:33:35,484] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.ome.tif:
[testng] [2024-06-15 01:33:35,896] [pool-1-thread-11] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif:
[testng] [2024-06-15 01:33:36,182] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.oir:
[testng] [2024-06-15 01:33:36,706] [pool-1-thread-2] Initializing /data/olympus/Clipboard-XYZt.tif:
[testng] [2024-06-15 01:33:37,144] [pool-1-thread-3] Initializing /data/qa-16871/XY_0003.ome.tif:
[testng] [2024-06-15 01:33:37,345] [pool-1-thread-1] Initializing /data/qa-17270/Clipboard-alexa488.tif:
[testng] [2024-06-15 01:33:37,389] [pool-1-thread-5] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif:
[testng] [2024-06-15 01:33:38,149] [pool-1-thread-2] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif:
[testng] [2024-06-15 01:33:38,455] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-P10-50 D2.tif:
[testng] [2024-06-15 01:33:38,644] [pool-1-thread-1] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir:
[testng] [2024-06-15 01:33:38,880] [pool-1-thread-5] Initializing /data/olympus/spectral_scan_XYL.ome.tif:
[testng] [2024-06-15 01:33:39,714] [pool-1-thread-2] Initializing /data/olympus/2017-04-20/Clipboard.tif:
[testng] [2024-06-15 01:33:39,981] [pool-1-thread-3] Initializing /data/olympus/2017-04-20/mito_0006_0001.ome.tif:
[testng] [2024-06-15 01:33:40,495] [pool-1-thread-11] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif:
[testng] [2024-06-15 01:33:40,612] [pool-1-thread-5] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir:
[testng] [2024-06-15 01:33:41,470] [pool-1-thread-3] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif:
[testng] [2024-06-15 01:33:41,618] [pool-1-thread-2] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif:
[testng] [2024-06-15 01:33:42,183] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif:
[testng] [2024-06-15 01:33:43,112] [pool-1-thread-11] Initializing /data/qa-17335/Clipboard-OSR-Z.tif:
[testng] [2024-06-15 01:33:43,390] [pool-1-thread-3] Initializing /data/public/etienne/amy slice z stack_0001.ome.tif:
[testng] [2024-06-15 01:33:43,619] [pool-1-thread-5] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir:
[testng] [2024-06-15 01:33:43,817] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.ome.tif:
[testng] [2024-06-15 01:33:44,749] [pool-1-thread-11] Initializing /data/olympus/2017-11-20/fish_overview/fish-overview-night.oir:
[testng] [2024-06-15 01:33:49,975] [pool-1-thread-2] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif:
[testng] [2024-06-15 01:33:50,310] [pool-1-thread-3] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif:
[testng] [2024-06-15 01:33:50,566] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif:
[testng] [2024-06-15 01:33:50,712] [pool-1-thread-5] Initializing /data/olympus/spectral_scan_XYL.oir:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 9858, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 52 minutes 33 seconds
Finished: SUCCESS