Started by upstream project "BIOFORMATS-test-repo" build number 94
originally caused by:
 Started by upstream project "Trigger" build number 105
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3
[BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins18168311746141305361.sh
+ '[' specs = slidebook ']'
++ date +%u
+ '[' 7 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_14432_merge_ci -v /uod/idr/repos/curated/specs:/data -v /uod/idr-scratch/merge-ci/curated/specs:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
   [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
   [testng] File leak detector installed
   [testng] 01:24:43,767 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 01:24:43,769 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service.
   [testng] 01:24:43,769 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:24:43,769 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:24:43,770 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 01:24:43,770 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 01:24:43,771 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 01:24:43,771 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:24:43,771 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:24:43,772 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 01:24:43,772 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 01:24:43,772 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 01:24:43,976 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 01:24:43,976 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 01:24:44,000 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 01:24:44,000 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 01:24:44,006 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 01:24:44,006 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 01:24:44,007 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 01:24:44,007 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 01:24:44,007 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration.
   [testng] 01:24:44,008 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point
   [testng] 01:24:44,008 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 237 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-06-16 01:24:44,017] [main] java.version = 17.0.2
   [testng] 01:24:44,021 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 01:24:44,021 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:24:44,082 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-16_01-24-44.log]
   [testng] 01:24:44,084 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration.
   [testng] [2024-06-16 01:24:44,087] [main] testng.directory = /data
   [testng] [2024-06-16 01:24:44,087] [main] testng.configDirectory = /config
   [testng] [2024-06-16 01:24:44,101] [main] testng.multiplier = 1.0
   [testng] [2024-06-16 01:24:44,102] [main] testng.in-memory = false
   [testng] [2024-06-16 01:24:44,103] [main] testng.allow-missing = false
   [testng] [2024-06-16 01:24:44,103] [main] user.language = en
   [testng] [2024-06-16 01:24:44,103] [main] user.country = ${user.country}
   [testng] [2024-06-16 01:24:44,103] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-06-16 01:24:54,989] [main] ----------------------------------------
   [testng] [2024-06-16 01:24:54,989] [main] Total files: 226
   [testng] [2024-06-16 01:24:54,990] [main] Scan time: 10.885 s (48 ms/file)
   [testng] [2024-06-16 01:24:54,990] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 28 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-06-16 01:25:01,791] [pool-1-thread-1] Initializing /data/iplab/Blend_DIC.IPL: 
   [testng] 01:25:01,791 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 01:25:01,792 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:01,793 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-16_01-25-01.log]
   [testng] 01:25:01,793 |-INFO in ch.qos.logback.core.sift.SiftProcessor@305e604b - End of configuration.
   [testng] [2024-06-16 01:25:01,817] [pool-1-thread-12] Initializing /data/fluoview/Sample_TwoCH.TIF: 
   [testng] 01:25:01,818 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 01:25:01,818 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:01,819 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-06-16_01-25-01.log]
   [testng] 01:25:01,820 |-INFO in ch.qos.logback.core.sift.SiftProcessor@8049b60 - End of configuration.
   [testng] [2024-06-16 01:25:01,878] [pool-1-thread-11] Initializing /data/zeiss_lsm/X-Y-Z-T-Ch-Tile-2.lsm: 
   [testng] 01:25:01,878 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 01:25:01,879 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:01,880 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-16_01-25-01.log]
   [testng] 01:25:01,880 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2f4df108 - End of configuration.
   [testng] [2024-06-16 01:25:01,998] [pool-1-thread-10] Initializing /data/iplab/3t3 Cell.IPL: 
   [testng] 01:25:01,998 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 01:25:01,998 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:01,999 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-16_01-25-01.log]
   [testng] 01:25:02,000 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4c028613 - End of configuration.
   [testng] [2024-06-16 01:25:02,008] [pool-1-thread-9] Initializing /data/fluoview/sample_labled_XYTCh.tif: 
   [testng] 01:25:02,009 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 01:25:02,009 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:02,009 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-16_01-25-02.log]
   [testng] 01:25:02,010 |-INFO in ch.qos.logback.core.sift.SiftProcessor@567fb3f1 - End of configuration.
   [testng] [2024-06-16 01:25:02,039] [pool-1-thread-8] Initializing /data/fluoview/SpineAnimation.tif: 
   [testng] 01:25:02,039 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 01:25:02,039 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:02,040 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-16_01-25-02.log]
   [testng] 01:25:02,041 |-INFO in ch.qos.logback.core.sift.SiftProcessor@736f2edb - End of configuration.
   [testng] [2024-06-16 01:25:02,106] [pool-1-thread-7] Initializing /data/iplab/Chromosomes.IPL: 
   [testng] 01:25:02,106 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 01:25:02,107 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:02,107 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-16_01-25-02.log]
   [testng] 01:25:02,108 |-INFO in ch.qos.logback.core.sift.SiftProcessor@134e6961 - End of configuration.
   [testng] [2024-06-16 01:25:02,114] [pool-1-thread-6] Initializing /data/fluoview/sample_labled_XYZTCh.tif: 
   [testng] 01:25:02,114 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 01:25:02,114 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:02,115 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-16_01-25-02.log]
   [testng] 01:25:02,115 |-INFO in ch.qos.logback.core.sift.SiftProcessor@259294a0 - End of configuration.
   [testng] [2024-06-16 01:25:02,140] [pool-1-thread-5] Initializing /data/fluoview/SpineAnimation.avi: 
   [testng] 01:25:02,140 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 01:25:02,140 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:02,141 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-16_01-25-02.log]
   [testng] 01:25:02,141 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3f7ac6fa - End of configuration.
   [testng] [2024-06-16 01:25:02,155] [pool-1-thread-4] Initializing /data/iplab/10x Blood and Bacteria.IPL: 
   [testng] 01:25:02,155 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 01:25:02,155 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:02,156 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-16_01-25-02.log]
   [testng] 01:25:02,157 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4a25cb77 - End of configuration.
   [testng] [2024-06-16 01:25:02,176] [pool-1-thread-3] Initializing /data/iplab/Blend_Dapi.IPL: 
   [testng] 01:25:02,176 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 01:25:02,176 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:02,177 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-16_01-25-02.log]
   [testng] 01:25:02,177 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4e9f6443 - End of configuration.
   [testng] [2024-06-16 01:25:02,186] [pool-1-thread-2] Initializing /data/zeiss_lsm/X-Y-Z-T-Ch-Tile--MultiTrack-1.lsm: 
   [testng] 01:25:02,186 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 01:25:02,187 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:02,188 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-16_01-25-02.log]
   [testng] 01:25:02,188 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2070a583 - End of configuration.
   [testng] [2024-06-16 01:25:04,145] [pool-1-thread-10] Initializing /data/iplab/Color Histology.IPL: 
   [testng] [2024-06-16 01:25:04,152] [pool-1-thread-7] Initializing /data/fluoview/Sample_ThreeCH.TIF: 
   [testng] [2024-06-16 01:25:04,214] [pool-1-thread-9] Initializing /data/iplab/Color Image.IPL: 
   [testng] [2024-06-16 01:25:04,221] [pool-1-thread-5] Initializing /data/gatan/ImageReader2003/ImageReaderTest/TestFiles/test3.dm3: 
   [testng] [2024-06-16 01:25:04,232] [pool-1-thread-3] Initializing /data/fluoview/Sample_XYT.TIF: 
   [testng] [2024-06-16 01:25:04,289] [pool-1-thread-1] Initializing /data/iplab/16Bit XRay.IPL: 
   [testng] [2024-06-16 01:25:04,296] [pool-1-thread-6] Initializing /data/fluoview/sample_labled_XYZCh.tif: 
   [testng] [2024-06-16 01:25:04,337] [pool-1-thread-4] Initializing /data/zeiss_lsm/X-Y-Z-T-Ch-Tile-1.lsm: 
   [testng] [2024-06-16 01:25:04,422] [pool-1-thread-8] Initializing /data/iplab/Actin.IPL: 
   [testng] [2024-06-16 01:25:04,430] [pool-1-thread-12] Initializing /data/fluoview/Sample_XT.tif: 
   [testng] [2024-06-16 01:25:04,707] [pool-1-thread-9] Initializing /data/iplab/Blend_Fitc.IPL: 
   [testng] [2024-06-16 01:25:04,716] [pool-1-thread-8] Initializing /data/fluoview/Sample_XYZ.TIF: 
   [testng] [2024-06-16 01:25:04,821] [pool-1-thread-10] Initializing /data/gatan/ImageReader2003/ImageReaderTest/TestFiles/Test.dm3: 
   [testng] [2024-06-16 01:25:04,837] [pool-1-thread-1] Initializing /data/gatan/ImageReader2003/ImageReaderTest/TestFiles/Test2.dm3: 
   [testng] [2024-06-16 01:25:04,883] [pool-1-thread-5] Initializing /data/iplab/Blend_Final.IPL: 
   [testng] [2024-06-16 01:25:05,068] [pool-1-thread-6] Initializing /data/iplab/Blend_Tritc.IPL: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 1484, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 27 seconds
Finished: SUCCESS