Started by upstream project "BIOFORMATS-test-repo" build number 94
originally caused by:
Started by upstream project "Trigger" build number 105
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder
[BIOFORMATS-test-folder] $ /bin/bash -xe /tmp/jenkins16818948942826725623.sh
+ '[' leica-lif = slidebook ']'
++ date +%u
+ '[' 7 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_14564_merge_ci -v /uod/idr/repos/curated/leica-lif:/data -v /uod/idr-scratch/merge-ci/curated/leica-lif:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
[testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
[testng] File leak detector installed
[testng] 02:45:48,133 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 02:45:48,134 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service.
[testng] 02:45:48,134 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 02:45:48,135 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 02:45:48,135 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 02:45:48,136 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 02:45:48,136 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 02:45:48,136 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 02:45:48,137 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 02:45:48,137 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 02:45:48,137 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 02:45:48,138 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 02:45:48,313 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 02:45:48,313 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 02:45:48,337 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 02:45:48,337 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 02:45:48,343 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 02:45:48,343 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 02:45:48,343 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 02:45:48,344 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 02:45:48,344 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration.
[testng] 02:45:48,345 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point
[testng] 02:45:48,345 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 208 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-06-16 02:45:48,355] [main] java.version = 17.0.2
[testng] 02:45:48,359 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 02:45:48,359 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:45:48,401 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-16_02-45-48.log]
[testng] 02:45:48,403 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration.
[testng] [2024-06-16 02:45:48,405] [main] testng.directory = /data
[testng] [2024-06-16 02:45:48,406] [main] testng.configDirectory = /config
[testng] [2024-06-16 02:45:48,415] [main] testng.multiplier = 1.0
[testng] [2024-06-16 02:45:48,416] [main] testng.in-memory = false
[testng] [2024-06-16 02:45:48,416] [main] testng.allow-missing = false
[testng] [2024-06-16 02:45:48,416] [main] user.language = en
[testng] [2024-06-16 02:45:48,416] [main] user.country = ${user.country}
[testng] [2024-06-16 02:45:48,416] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-06-16 02:50:14,377] [main] ----------------------------------------
[testng] [2024-06-16 02:50:14,377] [main] Total files: 402
[testng] [2024-06-16 02:50:14,377] [main] Scan time: 265.96 s (661 ms/file)
[testng] [2024-06-16 02:50:14,377] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 266 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-06-16 02:51:41,955] [pool-1-thread-1] Initializing /data/vytas/Image002_ch00.tif:
[testng] 02:51:41,956 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 02:51:41,956 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:51:41,957 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-16_02-51-41.log]
[testng] 02:51:41,957 |-INFO in ch.qos.logback.core.sift.SiftProcessor@d408f91 - End of configuration.
[testng] [2024-06-16 02:51:41,993] [pool-1-thread-12] Initializing /data/matthias/ms-beats.lif:
[testng] 02:51:41,993 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 02:51:41,993 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:51:41,994 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-06-16_02-51-41.log]
[testng] 02:51:41,994 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6cd8776d - End of configuration.
[testng] [2024-06-16 02:51:42,018] [pool-1-thread-11] Initializing /data/andrew/New XZY LIF Upload/Wrong Order/XZY Stacks Wrong Order.tif:
[testng] 02:51:42,018 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 02:51:42,019 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:51:42,019 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-16_02-51-42.log]
[testng] 02:51:42,020 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2236ab5e - End of configuration.
[testng] [2024-06-16 02:51:42,087] [pool-1-thread-10] Initializing /data/andrew/Series 68 TIFFs/Series068_t3_y4.tif:
[testng] 02:51:42,088 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 02:51:42,088 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:51:42,088 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-16_02-51-42.log]
[testng] 02:51:42,089 |-INFO in ch.qos.logback.core.sift.SiftProcessor@302c96f2 - End of configuration.
[testng] [2024-06-16 02:51:42,126] [pool-1-thread-9] Initializing /data/jcb/201003021_Fig8B.lif:
[testng] 02:51:42,127 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 02:51:42,127 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:51:42,127 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-16_02-51-42.log]
[testng] 02:51:42,128 |-INFO in ch.qos.logback.core.sift.SiftProcessor@150d6414 - End of configuration.
[testng] [2024-06-16 02:51:42,193] [pool-1-thread-8] Initializing /data/andrew/Series 68 TIFFs/Series068_t6_y1.tif:
[testng] 02:51:42,193 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 02:51:42,193 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:51:42,194 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-16_02-51-42.log]
[testng] 02:51:42,194 |-INFO in ch.qos.logback.core.sift.SiftProcessor@a3e809b - End of configuration.
[testng] [2024-06-16 02:51:42,254] [pool-1-thread-7] Initializing /data/andrew/New XZY LIF Upload/Right Order/Right Order Montage.tif:
[testng] 02:51:42,254 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 02:51:42,254 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:51:42,256 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-16_02-51-42.log]
[testng] 02:51:42,256 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2ed9e0cd - End of configuration.
[testng] [2024-06-16 02:51:42,322] [pool-1-thread-6] Initializing /data/andrew/Series 68 TIFFs/Series068_t3_y8.tif:
[testng] 02:51:42,322 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 02:51:42,322 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:51:42,323 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-16_02-51-42.log]
[testng] 02:51:42,323 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2f64bdb9 - End of configuration.
[testng] [2024-06-16 02:51:42,370] [pool-1-thread-5] Initializing /data/andrew/LIF Lambda/Lambda 1.lif:
[testng] 02:51:42,370 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 02:51:42,370 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:51:42,371 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-16_02-51-42.log]
[testng] 02:51:42,371 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7a040bc0 - End of configuration.
[testng] [2024-06-16 02:51:42,418] [pool-1-thread-4] Initializing /data/andrew/Series 68 TIFFs/Series068_t9_y6.tif:
[testng] 02:51:42,418 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 02:51:42,418 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:51:42,419 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-16_02-51-42.log]
[testng] 02:51:42,419 |-INFO in ch.qos.logback.core.sift.SiftProcessor@23a992ba - End of configuration.
[testng] [2024-06-16 02:51:42,448] [pool-1-thread-3] Initializing /data/andrew/Series 68 TIFFs/Series068_t7_y7.tif:
[testng] 02:51:42,448 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 02:51:42,448 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:51:42,449 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-16_02-51-42.log]
[testng] 02:51:42,449 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6c49bfe6 - End of configuration.
[testng] [2024-06-16 02:51:42,494] [pool-1-thread-2] Initializing /data/andrew/Series 68 TIFFs/Series068_t0_y6.tif:
[testng] 02:51:42,495 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 02:51:42,495 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:51:42,495 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-16_02-51-42.log]
[testng] 02:51:42,496 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1d1684aa - End of configuration.
[testng] [2024-06-16 02:51:44,089] [pool-1-thread-12] Initializing /data/ian/TGN647sh-GM130-532_10mMEA_03.lif:
[testng] [2024-06-16 02:51:44,177] [pool-1-thread-1] Initializing /data/andrew/Series 68 TIFFs/Series068_t4_y2.tif:
[testng] [2024-06-16 02:51:44,224] [pool-1-thread-11] Initializing /data/andrew/Series 68 TIFFs/Series068_t3_y5.tif:
[testng] [2024-06-16 02:51:44,262] [pool-1-thread-6] Initializing /data/martin/stack dapi-Alx568-reflectiveSnapshot All2.jpg:
[testng] [2024-06-16 02:51:44,442] [pool-1-thread-4] Initializing /data/public/seanwarren/150519_FRAP_test_ROIs_chromagreen/FRAP000_1um.png:
[testng] [2024-06-16 02:51:44,447] [pool-1-thread-8] Initializing /data/public/seanwarren/150519_FRAP_test_ROIs_chromagreen/FRAP002_5um.png:
[testng] [2024-06-16 02:51:44,453] [pool-1-thread-10] Initializing /data/fabrice/new/UL66 bicolore stacks + merge.lif:
[testng] [2024-06-16 02:51:44,567] [pool-1-thread-3] Initializing /data/andrew/Series 68 TIFFs/Series068_t8_y1.tif:
[testng] [2024-06-16 02:51:44,607] [pool-1-thread-2] Initializing /data/alexander/20120224.lif:
[testng] [2024-06-16 02:51:44,916] [pool-1-thread-9] Initializing /data/ville/single_channel.lif:
[testng] [2024-06-16 02:51:44,985] [pool-1-thread-7] Initializing /data/andrew/Series 68 TIFFs/Series068_t5_y7.tif:
[testng] [2024-06-16 02:51:45,110] [pool-1-thread-5] Initializing /data/chris/free edge 6.lif:
[testng] [2024-06-16 02:51:45,609] [pool-1-thread-3] Initializing /data/olivier/120404_Li011_200V.lif:
[testng] [2024-06-16 02:51:45,643] [pool-1-thread-11] Initializing /data/christian/20090323fluoresceinRPMI.lif:
[testng] [2024-06-16 02:51:45,721] [pool-1-thread-9] Initializing /data/qa-4791/TestFlorianDescription2.lif:
[testng] [2024-06-16 02:51:45,730] [pool-1-thread-1] Initializing /data/qa-10917/P2P-MS2-lacZ.lif:
[testng] [2024-06-16 02:51:45,867] [pool-1-thread-8] Initializing /data/andrew/Series 68 TIFFs/Series068_t2_y5.tif:
[testng] [2024-06-16 02:51:45,929] [pool-1-thread-4] Initializing /data/lance/Beta Catenin.lif:
[testng] [2024-06-16 02:51:45,951] [pool-1-thread-6] Initializing /data/peter/20110916D.lif:
[testng] [2024-06-16 02:51:47,395] [pool-1-thread-7] Initializing /data/andrew/Series 68 TIFFs/Series068_t7_y2.tif:
[testng] [2024-06-16 02:51:47,571] [pool-1-thread-9] Initializing /data/andrew/Series 68 TIFFs/Series068_t9_y8.tif:
[testng] [2024-06-16 02:51:48,565] [pool-1-thread-12] Initializing /data/qa-6635/2013_03_01_MLH1_SYCP3_HSPA2_16dpc_SC.lif:
[testng] [2024-06-16 02:51:48,616] [pool-1-thread-3] Initializing /data/jcb/JCB 201203109/FIG2D STAT3-EYFP BDNF.lif:
[testng] [2024-06-16 02:51:48,669] [pool-1-thread-4] Initializing /data/andrew/Series 68 TIFFs/Series068_t3_y6.tif:
[testng] [2024-06-16 02:51:48,704] [pool-1-thread-2] Initializing /data/matthias/ms-first tests.lif:
[testng] [2024-06-16 02:51:48,874] [pool-1-thread-11] Initializing /data/melissa/roi-test-1.xml:
[testng] [2024-06-16 02:51:48,887] [pool-1-thread-9] Initializing /data/leon/leon002.lif:
[testng] [2024-06-16 02:51:48,903] [pool-1-thread-7] Initializing /data/tony/Scanerror-nested.lif:
[testng] [2024-06-16 02:51:48,940] [pool-1-thread-8] Initializing /data/andrew/Series 68 TIFFs/Series068_t6_y5.tif:
[testng] [2024-06-16 02:51:49,214] [pool-1-thread-1] Initializing /data/schek/Experiment_001.lif:
[testng] [2024-06-16 02:51:49,581] [pool-1-thread-9] Initializing /data/andrew/Par6 GFP delaminating cells.lif:
[testng] [2024-06-16 02:51:49,716] [pool-1-thread-11] Initializing /data/andrew/Series 68 TIFFs/Series068_t1_y7.tif:
[testng] [2024-06-16 02:51:49,841] [pool-1-thread-12] Initializing /data/christophe/test_greys_with_roi.lif:
[testng] [2024-06-16 02:51:49,939] [pool-1-thread-8] Initializing /data/christophe/test_greys.lif:
[testng] [2024-06-16 02:51:50,154] [pool-1-thread-4] Initializing /data/mario/2007-11-12_L15_AF001.lif:
[testng] [2024-06-16 02:51:50,262] [pool-1-thread-3] Initializing /data/public/imagesc-30856/20191025 Test FRET 585. 423, 426.lif:
[testng] [2024-06-16 02:51:50,466] [pool-1-thread-8] Initializing /data/alex/2010-11-29-test-for-OME.lif:
[testng] [2024-06-16 02:51:50,599] [pool-1-thread-12] Initializing /data/chris/kees_friday2.lif:
[testng] [2024-06-16 02:51:50,704] [pool-1-thread-7] Initializing /data/andrew/Series 68 TIFFs/Series068_t5_y3.tif:
[testng] [2024-06-16 02:51:51,009] [pool-1-thread-10] Initializing /data/andrew/Series 68 TIFFs/Series068_t5_y2.tif:
[testng] [2024-06-16 02:51:51,039] [pool-1-thread-11] Initializing /data/andrew/Series 68 TIFFs/Series068_t0_y2.tif:
[testng] [2024-06-16 02:51:51,219] [pool-1-thread-8] Initializing /data/andrew/Series 68 TIFFs/Series068_t2_y4.tif:
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[testng] [2024-06-16 02:51:53,833] [pool-1-thread-8] Initializing /data/andrew/FRAP_Test_250708.lif:
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[testng] [2024-06-16 02:51:54,564] [pool-1-thread-7] Initializing /data/stefan/p24b-v1240.lif:
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[testng] [2024-06-16 02:51:55,834] [pool-1-thread-10] Initializing /data/christophe/01_4C1Z.lif:
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[testng] [2024-06-16 02:51:59,382] [pool-1-thread-5] Initializing /data/andrew/New XZY LIF Upload/Right Order/XZY Stacks Right Order Ch3.avi:
[testng] [2024-06-16 02:51:59,437] [pool-1-thread-12] Initializing /data/qa-21092/1-GBP1-CaaX+LLoMe.lif:
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[testng] [2024-06-16 02:52:02,047] [pool-1-thread-1] Initializing /data/andrew/Snapshots_150908.lif:
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[testng] [2024-06-16 02:52:02,485] [pool-1-thread-12] Initializing /data/stefan/Rx3GFP280907.lif:
[testng] [2024-06-16 02:52:02,932] [pool-1-thread-5] Initializing /data/vytas/2014/2nd MeBl30 200MEA plus bkpmp end.lif:
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[testng] [2024-06-16 02:52:03,460] [pool-1-thread-10] Initializing /data/tommaso/Midollo GFAP 27.10.10 OXA+PEA 40x.lif:
[testng] [2024-06-16 02:52:04,049] [pool-1-thread-10] Initializing /data/qa-7273/5-17 Hypoxia.lif:
[testng] [2024-06-16 02:52:04,355] [pool-1-thread-9] Initializing /data/pascal/test.lif:
[testng] [2024-06-16 02:52:04,416] [pool-1-thread-8] Initializing /data/jean-marie/20100827G1.lif:
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[testng] [2024-06-16 02:52:07,174] [pool-1-thread-8] Initializing /data/andrew/Series 68 TIFFs/Series068_t6_y9.tif:
[testng] [2024-06-16 02:52:07,223] [pool-1-thread-9] Initializing /data/vytas/030510-esxA-mCherry 3.lif:
[testng] [2024-06-16 02:52:07,874] [pool-1-thread-1] Initializing /data/stefan/Experiment.lif:
[testng] [2024-06-16 02:52:07,900] [pool-1-thread-12] Initializing /data/andrew/LIF Lambda/Lambda 1 file grab.bmp:
[testng] [2024-06-16 02:52:07,904] [pool-1-thread-7] Initializing /data/martin-hoehne/Niere-Schnitt-GFP-dTomato.lif:
[testng] [2024-06-16 02:52:08,579] [pool-1-thread-5] Initializing /data/jcb/JCB 201203109/FIG 2D STAT3-EYFP CNTF.lif:
[testng] [2024-06-16 02:52:09,074] [pool-1-thread-3] Initializing /data/qa-10980/Day 2 Chitin Kan.lif:
[testng] [2024-06-16 02:52:09,128] [pool-1-thread-8] Initializing /data/andrew/New XZY LIF Upload/Wrong Order/XZY Wrong Order Merge.avi:
[testng] [2024-06-16 02:52:09,143] [pool-1-thread-12] Initializing /data/andrew/New XZY LIF Upload/Wrong Order/XZY Stacks Wrong Order Ch3.avi:
[testng] [2024-06-16 02:52:09,323] [pool-1-thread-1] Initializing /data/jcb/Figure 1A.lif:
[testng] [2024-06-16 02:52:09,454] [pool-1-thread-8] Initializing /data/andrew/Series 68 TIFFs/Series068_t3_y0.tif:
[testng] [2024-06-16 02:52:09,499] [pool-1-thread-5] Initializing /data/andrew/Series 68 TIFFs/Series068_t8_y9.tif:
[testng] [2024-06-16 02:52:09,573] [pool-1-thread-12] Initializing /data/jcb/JCB 201112145/Figure 3A.lif:
[testng] [2024-06-16 02:52:09,727] [pool-1-thread-1] Initializing /data/andrew/Series 68 Multi from Importer.tif:
[testng] [2024-06-16 02:52:10,804] [pool-1-thread-12] Initializing /data/fabrice/Clipboard.jpg:
[testng] [2024-06-16 02:52:10,949] [pool-1-thread-8] Initializing /data/stephen/Timelapse of RG An embryos.lif:
[testng] [2024-06-16 02:52:11,000] [pool-1-thread-5] Initializing /data/public/seanwarren/150519_FRAP_test_ROIs_chromagreen/150519_FRAP_test_ROIs_chromagreen.lif:
[testng] [2024-06-16 02:52:11,301] [pool-1-thread-12] Initializing /data/tony/OPN_cy3_dapi_trab.lif:
[testng] [2024-06-16 02:52:11,840] [pool-1-thread-2] Initializing /data/fabrice/test 2.lif:
[testng] [2024-06-16 02:52:12,058] [pool-1-thread-7] Initializing /data/andrew/LIF Lambda/Montage of Alexa 488 Lambda.tif:
[testng] [2024-06-16 02:52:12,404] [pool-1-thread-7] Initializing /data/andrew/Snapshots_1kx1k_150908.lif:
[testng] [2024-06-16 02:52:12,745] [pool-1-thread-8] Initializing /data/nicolas/Experiment.lif:
[testng] [2024-06-16 02:52:14,785] [pool-1-thread-5] Initializing /data/oliver/Multi-channel Measurements.lif:
[testng] [2024-06-16 02:52:14,838] [pool-1-thread-12] Initializing /data/jcb/201007044/Figure 4C - F505.lif:
[testng] [2024-06-16 02:52:14,897] [pool-1-thread-2] Initializing /data/melissa/Series001_z1.tif:
[testng] [2024-06-16 02:52:15,014] [pool-1-thread-12] Initializing /data/andrew/Series 68 TIFFs/Series068_t9_y2.tif:
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[testng] [2024-06-16 02:52:15,560] [pool-1-thread-12] Initializing /data/andrew/Series 68 TIFFs/Series068_t7_y4.tif:
[testng] [2024-06-16 02:52:16,140] [pool-1-thread-2] Initializing /data/vytas/20x deconvol demo.lif:
[testng] [2024-06-16 02:52:16,436] [pool-1-thread-12] Initializing /data/andrew/Series 68 TIFFs/Series068_t8_y0.tif:
[testng] [2024-06-16 02:52:16,865] [pool-1-thread-10] Initializing /data/andrew/Series 68 TIFFs/Series068_t0_y9.tif:
[testng] [2024-06-16 02:52:17,178] [pool-1-thread-12] Initializing /data/andrew/Series 68 TIFFs/Series068_t3_y7.tif:
[testng] [2024-06-16 02:52:17,336] [pool-1-thread-7] Initializing /data/andrew/Series 68 TIFFs/Series068_t9_y5.tif:
[testng] [2024-06-16 02:52:17,459] [pool-1-thread-3] Initializing /data/andrew/Series 68 TIFFs/Series068_t6_y8.tif:
[testng] [2024-06-16 02:52:17,601] [pool-1-thread-10] Initializing /data/public/michael/PR2729_frameOrderCombinedScanTypes.lif:
[testng] [2024-06-16 02:52:17,737] [pool-1-thread-10] Initializing /data/dirk/Mag-test.lif:
[testng] [2024-06-16 02:52:17,816] [pool-1-thread-1] Initializing /data/jerome/E346_268_cutceaf.lif:
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[testng] [2024-06-16 02:52:18,218] [pool-1-thread-3] Initializing /data/kristine/Kristine.lif:
[testng] [2024-06-16 02:52:18,804] [pool-1-thread-2] Initializing /data/vytas/data samples.lif:
[testng] [2024-06-16 02:52:19,023] [pool-1-thread-10] Initializing /data/andrew/Series 68 TIFFs/Series068_t0_y3.tif:
[testng] [2024-06-16 02:52:19,109] [pool-1-thread-7] Initializing /data/andrew/Series 68 TIFFs/Series068_t1_y1.tif:
[testng] [2024-06-16 02:52:19,947] [pool-1-thread-10] Initializing /data/stefan/3D_Prionium_thick_stack.lif:
[testng] [2024-06-16 02:52:19,983] [pool-1-thread-7] Initializing /data/andrew/LIF Lambda/Image J Grab.tiff:
[testng] [2024-06-16 02:52:20,336] [pool-1-thread-10] Initializing /data/andrew/New XZY LIF Upload/Right Order/XZY Stacks Right Order Ch1.avi:
[testng] [2024-06-16 02:52:20,611] [pool-1-thread-10] Initializing /data/sagar/c55 scatter stage 14.lif:
[testng] [2024-06-16 02:52:20,959] [pool-1-thread-2] Initializing /data/andrew/Series 68 TIFFs/Series068_t9_y3.tif:
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[testng] [2024-06-16 02:52:22,068] [pool-1-thread-12] Initializing /data/qa-3859/LSItoday.lif:
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[testng] [2024-06-16 02:52:22,548] [pool-1-thread-3] Initializing /data/stefan/exp02.lif:
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[testng] [2024-06-16 02:52:22,899] [pool-1-thread-7] Initializing /data/mario/2007-11-13_DMEM_GFPcells.lif:
[testng] [2024-06-16 02:52:23,156] [pool-1-thread-3] Initializing /data/vytas/Experiment2.lif:
[testng] [2024-06-16 02:52:23,172] [pool-1-thread-9] Initializing /data/andrew/Series 68 TIFFs/Series068_t2_y6.tif:
[testng] [2024-06-16 02:52:23,202] [pool-1-thread-10] Initializing /data/public/seanwarren/150519_FRAP_test_ROIs_chromagreen/FRAP001_2_5um.png:
[testng] [2024-06-16 02:52:23,494] [pool-1-thread-2] Initializing /data/andrew/Series 68 TIFFs/Series068_t8_y3.tif:
[testng] [2024-06-16 02:52:23,647] [pool-1-thread-3] Initializing /data/sebastian/sebHaase2.lif:
[testng] [2024-06-16 02:52:23,913] [pool-1-thread-9] Initializing /data/stefan/Rx3GFP280907pos003.lif:
[testng] [2024-06-16 02:52:24,185] [pool-1-thread-7] Initializing /data/andrew/Series 68 TIFFs/Series068_t5_y5.tif:
[testng] [2024-06-16 02:52:24,230] [pool-1-thread-10] Initializing /data/vytas/B6 mo2 g9c8 act tc DiD 20mil 24hrs after inj rbc DiI.lif:
[testng] [2024-06-16 02:52:25,611] [pool-1-thread-2] Initializing /data/andrew/Series 68 TIFFs/Series068_t9_y4.tif:
[testng] [2024-06-16 02:52:25,665] [pool-1-thread-3] Initializing /data/public/seanwarren/150519_FRAP_test_ROIs_chromagreen/FRAP003_10um.png:
[testng] [2024-06-16 02:52:26,181] [pool-1-thread-2] Initializing /data/martin-hoehne/Niere-Schnitt5.lif:
[testng] [2024-06-16 02:52:26,297] [pool-1-thread-7] Initializing /data/andrew/Series 68 TIFFs/Series068_t1_y3.tif:
[testng] [2024-06-16 02:52:26,519] [pool-1-thread-9] Initializing /data/stefan/spe.lif:
[testng] [2024-06-16 02:52:26,539] [pool-1-thread-1] Initializing /data/matthias/directory_tree.jpg:
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[testng] [2024-06-16 02:52:26,860] [pool-1-thread-1] Initializing /data/tony/Celegeansexp01.lif:
[testng] [2024-06-16 02:52:27,169] [pool-1-thread-7] Initializing /data/andrew/Series 68 TIFFs/Series068_t5_y4.tif:
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[testng] [2024-06-16 02:52:27,513] [pool-1-thread-3] Initializing /data/jerome/E345_312.lif:
[testng] [2024-06-16 02:52:27,601] [pool-1-thread-2] Initializing /data/claude/1A.lif:
[testng] [2024-06-16 02:52:27,997] [pool-1-thread-12] Initializing /data/andrew/Series 68 TIFFs/Series068_t7_y6.tif:
[testng] [2024-06-16 02:52:28,325] [pool-1-thread-7] Initializing /data/mark/Leica_FRAP_1channel_noZ-stack.lif:
[testng] [2024-06-16 02:52:28,481] [pool-1-thread-9] Initializing /data/andrew/Series 68 TIFFs/Series068_t8_y8.tif:
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[testng] [2024-06-16 02:52:28,974] [pool-1-thread-12] Initializing /data/rich/TEST.lif:
[testng] [2024-06-16 02:52:29,241] [pool-1-thread-12] Initializing /data/andrew/Series 68 TIFFs/Series068_t3_y1.tif:
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[testng] [2024-06-16 02:52:29,378] [pool-1-thread-7] Initializing /data/sagar/forMelissa.lif:
[testng] [2024-06-16 02:52:29,456] [pool-1-thread-5] Initializing /data/andrew/New XZY LIF Upload/XZY Stacks.lif:
[testng] [2024-06-16 02:52:29,775] [pool-1-thread-7] Initializing /data/andrew/Series 68 TIFFs/Series068_t1_y8.tif:
[testng] [2024-06-16 02:52:29,981] [pool-1-thread-5] Initializing /data/melissa/roi-test-1.lif:
[testng] [2024-06-16 02:52:30,034] [pool-1-thread-9] Initializing /data/andrew/Series 68 TIFFs/Series068_t1_y2.tif:
[testng] [2024-06-16 02:52:30,068] [pool-1-thread-12] Initializing /data/andrew/Series 68 TIFFs/Series068_t8_y5.tif:
[testng] [2024-06-16 02:52:30,495] [pool-1-thread-5] Initializing /data/schek/LIF2_test.lif:
[testng] [2024-06-16 02:52:30,699] [pool-1-thread-7] Initializing /data/vytas/LIFtest.lif:
[testng] [2024-06-16 02:52:30,810] [pool-1-thread-5] Initializing /data/melissa/Series001_z0.tif:
[testng] [2024-06-16 02:52:30,901] [pool-1-thread-9] Initializing /data/vytas/Experimenttest2.lif:
[testng] [2024-06-16 02:52:31,032] [pool-1-thread-12] Initializing /data/jcb/201007044/Figure 4C - F761.lif:
[testng] [2024-06-16 02:52:31,157] [pool-1-thread-7] Initializing /data/andrew/Series 68 TIFFs/Series068_t4_y8.tif:
[testng] [2024-06-16 02:52:31,203] [pool-1-thread-12] Initializing /data/jcb/201007044/Figure 4D - F761.lif:
[testng] [2024-06-16 02:52:31,414] [pool-1-thread-1] Initializing /data/andrew/FRAP_Test_12-0808.lif:
[testng] [2024-06-16 02:52:31,508] [pool-1-thread-12] Initializing /data/andrew/New XZY LIF Upload/Right Order/XZY Stacks Right Order Merge.avi:
[testng] [2024-06-16 02:52:31,540] [pool-1-thread-5] Initializing /data/andrew/Series 68 TIFFs/Series068_t6_y2.tif:
[testng] [2024-06-16 02:52:31,827] [pool-1-thread-12] Initializing /data/christophe/070921_HN_Nav.lif:
[testng] [2024-06-16 02:52:31,998] [pool-1-thread-9] Initializing /data/andrew/Series 68 TIFFs/Series068_t6_y0.tif:
[testng] [2024-06-16 02:52:32,117] [pool-1-thread-7] Initializing /data/olivier/tiled/Mike.lif:
[testng] [2024-06-16 02:52:32,133] [pool-1-thread-3] Initializing /data/andrew/Series 68 TIFFs/Series068_t9_y9.tif:
[testng] [2024-06-16 02:52:32,706] [pool-1-thread-5] Initializing /data/vytas/Series008_t000_ch00.tif:
[testng] [2024-06-16 02:52:33,172] [pool-1-thread-3] Initializing /data/schek/Experiment_001_2010.lif:
[testng] [2024-06-16 02:52:33,407] [pool-1-thread-9] Initializing /data/vytas/Experiment not horrid.lif:
[testng] [2024-06-16 02:52:33,803] [pool-1-thread-3] Initializing /data/andrew/Series 68 TIFFs/Series068_t1_y6.tif:
[testng] [2024-06-16 02:52:33,948] [pool-1-thread-1] Initializing /data/andrew/Series 68 TIFFs/Series068_t0_y4.tif:
[testng] [2024-06-16 02:52:34,907] [pool-1-thread-3] Initializing /data/andrew/Series 68 TIFFs/Series068_t6_y6.tif:
[testng] [2024-06-16 02:52:34,963] [pool-1-thread-1] Initializing /data/fabrice/test 1.lif:
[testng] [2024-06-16 02:52:35,482] [pool-1-thread-1] Initializing /data/christian/20090323illutest_BFmisaligned.lif:
[testng] [2024-06-16 02:52:35,653] [pool-1-thread-3] Initializing /data/jcb/JCB 201112145/Figure 5B.lif:
[testng] [2024-06-16 02:52:35,698] [pool-1-thread-12] Initializing /data/oliver/Single Channel Measurements.lif:
[testng] [2024-06-16 02:52:35,927] [pool-1-thread-1] Initializing /data/qa-16911/DM6000_colour-camera-12bit.lif:
[testng] [2024-06-16 02:52:36,161] [pool-1-thread-3] Initializing /data/andrew/New XZY LIF Upload/Right Order/XZY Stacks Right Order Ch2.avi:
[testng] [2024-06-16 02:52:36,527] [pool-1-thread-3] Initializing /data/richard/resolution check.lif:
[testng] [2024-06-16 02:52:36,623] [pool-1-thread-7] Initializing /data/kota/int_ok.lif:
[testng] [2024-06-16 02:52:36,961] [pool-1-thread-3] Initializing /data/melissa/LIF2_test-with-ROIs.lif:
[testng] [2024-06-16 02:52:43,715] [pool-1-thread-10] Initializing /data/garcion/testOne.lif:
[testng] [2024-06-16 02:52:43,777] [pool-1-thread-3] Initializing /data/andrew/Series 68 TIFFs/Series068_t2_y2.tif:
[testng] [2024-06-16 02:52:43,805] [pool-1-thread-5] Initializing /data/andrew/Series 68 TIFFs/Series068_t8_y6.tif:
[testng] [2024-06-16 02:52:43,847] [pool-1-thread-9] Initializing /data/andrew/New XZY LIF Upload/Wrong Order/XZY Stacks Wrong Order Ch2.avi:
[testng] [2024-06-16 02:52:43,870] [pool-1-thread-7] Initializing /data/andrew/Series 68 TIFFs/Series068_t7_y0.tif:
[testng] [2024-06-16 02:52:43,904] [pool-1-thread-8] Initializing /data/andrew/Series 68 TIFFs/Series068_t0_y5.tif:
[testng] [2024-06-16 02:52:43,936] [pool-1-thread-12] Initializing /data/andrew/New XZY LIF Upload/Right Order/XZY Stacks Right Order.tif:
[testng] [2024-06-16 02:52:44,261] [pool-1-thread-9] Initializing /data/andrew/Series 68 TIFFs/Series068_t3_y9.tif:
[testng] [2024-06-16 02:52:44,497] [pool-1-thread-12] Initializing /data/sebastian/sebHaase.lif:
[testng] [2024-06-16 02:52:44,558] [pool-1-thread-10] Initializing /data/andrew/Series 68 TIFFs/Series068_t0_y7.tif:
[testng] [2024-06-16 02:52:44,732] [pool-1-thread-8] Initializing /data/claus/080118_group3.lif:
[testng] [2024-06-16 02:52:44,753] [pool-1-thread-5] Initializing /data/pki/RA4 P3 x63.lif:
[testng] [2024-06-16 02:52:44,765] [pool-1-thread-7] Initializing /data/jcb/201007044/Figure 4D - F505.lif:
[testng] [2024-06-16 02:52:44,775] [pool-1-thread-3] Initializing /data/olivier/STAGE CONFIG1.lif:
[testng] [2024-06-16 02:52:44,830] [pool-1-thread-1] Initializing /data/martin/110921 Goedele.lif:
[testng] [2024-06-16 02:52:45,551] [pool-1-thread-7] Initializing /data/andrew/Series 68 TIFFs/Series068_t0_y8.tif:
[testng] [2024-06-16 02:52:45,610] [pool-1-thread-9] Initializing /data/andrew/SP5 FRAP/220311 FRAP YFP test.lif:
[testng] [2024-06-16 02:52:45,743] [pool-1-thread-12] Initializing /data/andrew/Series 68 TIFFs/Series068_t6_y4.tif:
[testng] [2024-06-16 02:52:45,941] [pool-1-thread-8] Initializing /data/andrew/Series 68 TIFFs/Series068_t5_y9.tif:
[testng] [2024-06-16 02:52:45,994] [pool-1-thread-3] Initializing /data/tony/20070413FLIMtest.lif:
[testng] [2024-06-16 02:52:46,061] [pool-1-thread-10] Initializing /data/andrew/Series 68 TIFFs/Series068_t7_y5.tif:
[testng] [2024-06-16 02:52:46,334] [pool-1-thread-5] Initializing /data/andrew/SP5 FRAP/ROI data.jpg:
[testng] [2024-06-16 02:52:46,504] [pool-1-thread-7] Initializing /data/andrew/Series 68 TIFFs/Series068_t2_y8.tif:
[testng] [2024-06-16 02:52:46,604] [pool-1-thread-3] Initializing /data/andrew/Series 68 TIFFs/Series068_t9_y7.tif:
[testng] [2024-06-16 02:52:46,649] [pool-1-thread-12] Initializing /data/claude/4B.lif:
[testng] [2024-06-16 02:52:46,978] [pool-1-thread-10] Initializing /data/andrew/Series 68 TIFFs/Series068_t4_y5.tif:
[testng] [2024-06-16 02:52:47,024] [pool-1-thread-8] Initializing /data/ville/expected output.png:
[testng] [2024-06-16 02:52:47,329] [pool-1-thread-3] Initializing /data/fabrice/Clipboard-1.jpg:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 14098, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 8 minutes 47 seconds
Finished: SUCCESS