Started by upstream project "BIOFORMATS-test-repo" build number 95
originally caused by:
Started by upstream project "Trigger" build number 106
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6
[BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins16644208056458638506.sh
+ '[' olympus-oir = slidebook ']'
++ date +%u
+ '[' 1 -le 1 ']'
+ DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR'
+ sudo docker run --rm --name BIOFORMATS-test-folder_14580_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 01:22:41,397 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 01:22:41,400 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service.
[testng] 01:22:41,400 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:22:41,402 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:22:41,402 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 01:22:41,403 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 01:22:41,403 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 01:22:41,403 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:22:41,404 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:22:41,405 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 01:22:41,405 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 01:22:41,405 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 01:22:41,723 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 01:22:41,723 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 01:22:41,756 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 01:22:41,756 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 01:22:41,765 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 01:22:41,765 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 01:22:41,765 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 01:22:41,766 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 01:22:41,766 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration.
[testng] 01:22:41,767 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point
[testng] 01:22:41,767 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 363 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-06-17 01:22:41,779] [main] java.version = 1.8.0_342
[testng] 01:22:41,784 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 01:22:41,784 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:22:41,833 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-17_01-22-41.log]
[testng] 01:22:41,835 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
[testng] [2024-06-17 01:22:41,837] [main] testng.directory = /data
[testng] [2024-06-17 01:22:41,838] [main] testng.configDirectory = /config
[testng] [2024-06-17 01:22:41,851] [main] testng.multiplier = 1.0
[testng] [2024-06-17 01:22:41,852] [main] testng.in-memory = false
[testng] [2024-06-17 01:22:41,852] [main] testng.allow-missing = false
[testng] [2024-06-17 01:22:41,852] [main] user.language = fr
[testng] [2024-06-17 01:22:41,852] [main] user.country = FR
[testng] [2024-06-17 01:22:41,852] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2024-06-17 01:23:02,215] [main] ----------------------------------------
[testng] [2024-06-17 01:23:02,215] [main] Total files: 283
[testng] [2024-06-17 01:23:02,215] [main] Scan time: 20.363 s (71 ms/file)
[testng] [2024-06-17 01:23:02,215] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 186 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-06-17 01:32:05,412] [pool-1-thread-1] Initializing /data/olympus/_stitched 4x4 zstack 10X_XYZ_/stack1/frame_t_0.ets:
[testng] 01:32:05,412 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 01:32:05,412 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:32:05,413 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-17_01-32-05.log]
[testng] 01:32:05,414 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4fc9c8b8 - End of configuration.
[testng] [2024-06-17 01:32:05,437] [pool-1-thread-12] Initializing /data/qa-17409/Stitch_A01_G001-exported.ome.tif:
[testng] 01:32:05,438 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 01:32:05,438 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:32:05,438 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-06-17_01-32-05.log]
[testng] 01:32:05,439 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7439c9d8 - End of configuration.
[testng] [2024-06-17 01:32:05,561] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif:
[testng] 01:32:05,561 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 01:32:05,561 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:32:05,562 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-17_01-32-05.log]
[testng] 01:32:05,562 |-INFO in ch.qos.logback.core.sift.SiftProcessor@65172510 - End of configuration.
[testng] [2024-06-17 01:32:05,720] [pool-1-thread-10] Initializing /data/qa-17270/stack1.ome.tif:
[testng] 01:32:05,721 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 01:32:05,721 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:32:05,721 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-17_01-32-05.log]
[testng] 01:32:05,722 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7c284f92 - End of configuration.
[testng] [2024-06-17 01:32:05,854] [pool-1-thread-9] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir:
[testng] 01:32:05,854 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 01:32:05,855 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:32:05,855 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-17_01-32-05.log]
[testng] 01:32:05,856 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1ee3cabf - End of configuration.
[testng] [2024-06-17 01:32:05,984] [pool-1-thread-8] Initializing /data/public/etienne/coupe shg stack_0001.oir:
[testng] 01:32:05,984 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 01:32:05,984 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:32:05,985 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-17_01-32-05.log]
[testng] 01:32:05,986 |-INFO in ch.qos.logback.core.sift.SiftProcessor@63c992dd - End of configuration.
[testng] [2024-06-17 01:32:06,404] [pool-1-thread-7] Initializing /data/qa-16881/P10D1 20150729_0019.oir:
[testng] 01:32:06,405 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 01:32:06,405 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:32:06,405 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-17_01-32-06.log]
[testng] 01:32:06,406 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1fff641b - End of configuration.
[testng] [2024-06-17 01:32:06,671] [pool-1-thread-6] Initializing /data/qa-16881/P10D1 20150729.oir:
[testng] 01:32:06,671 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 01:32:06,671 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:32:06,672 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-17_01-32-06.log]
[testng] 01:32:06,672 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4d408e51 - End of configuration.
[testng] [2024-06-17 01:32:07,025] [pool-1-thread-5] Initializing /data/olympus/spectral_scan_XYL.oir:
[testng] 01:32:07,025 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 01:32:07,025 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:32:07,026 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-17_01-32-07.log]
[testng] 01:32:07,026 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5c9788b4 - End of configuration.
[testng] [2024-06-17 01:32:07,555] [pool-1-thread-4] Initializing /data/qa-16881/Clipboard-W1-135 D6 New 20150818_0010.tif:
[testng] 01:32:07,555 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 01:32:07,555 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:32:07,556 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-17_01-32-07.log]
[testng] 01:32:07,557 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6620bb14 - End of configuration.
[testng] [2024-06-17 01:32:07,632] [pool-1-thread-3] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif:
[testng] 01:32:07,633 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 01:32:07,633 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:32:07,633 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-17_01-32-07.log]
[testng] 01:32:07,634 |-INFO in ch.qos.logback.core.sift.SiftProcessor@41fc1d62 - End of configuration.
[testng] [2024-06-17 01:32:07,678] [pool-1-thread-2] Initializing /data/qa-17270/alexa488.oir:
[testng] 01:32:07,678 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 01:32:07,678 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:32:07,679 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-17_01-32-07.log]
[testng] 01:32:07,680 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6508fa29 - End of configuration.
[testng] [2024-06-17 01:32:10,131] [pool-1-thread-11] Initializing /data/olympus/2017-04-20/Clipboard.tif:
[testng] [2024-06-17 01:32:10,174] [pool-1-thread-4] Initializing /data/olympus/Clipboard-XYZt.tif:
[testng] [2024-06-17 01:32:10,221] [pool-1-thread-3] Initializing /data/qa-16881/P10-50 D2.ome.tif:
[testng] [2024-06-17 01:32:10,340] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif:
[testng] [2024-06-17 01:32:11,110] [pool-1-thread-2] Initializing /data/qa-17270/Clipboard-alexa488.tif:
[testng] [2024-06-17 01:32:11,154] [pool-1-thread-1] Initializing /data/public/etienne/Clipboard-venus stack.tif:
[testng] [2024-06-17 01:32:11,989] [pool-1-thread-4] Initializing /data/qa-17270/image1.oir:
[testng] [2024-06-17 01:32:12,139] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Clipboard-Image_0079_0001.tif:
[testng] [2024-06-17 01:32:12,277] [pool-1-thread-11] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir:
[testng] [2024-06-17 01:32:12,658] [pool-1-thread-10] Initializing /data/qa-18802/20171020_JupGFPHisRFP_L3_30xSI_galvo_p5z_p1xy_better_than_nyquist.oir:
[testng] [2024-06-17 01:32:14,498] [pool-1-thread-2] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif:
[testng] [2024-06-17 01:32:14,706] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif:
[testng] [2024-06-17 01:32:14,789] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif:
[testng] [2024-06-17 01:32:15,111] [pool-1-thread-7] Initializing /data/qa-16871/Clipboard.tif:
[testng] [2024-06-17 01:32:15,171] [pool-1-thread-4] Initializing /data/qa-16881/Clipboard-P10-50 D2_0019.tif:
[testng] [2024-06-17 01:32:15,295] [pool-1-thread-9] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.ome.tif:
[testng] [2024-06-17 01:32:15,846] [pool-1-thread-3] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif:
[testng] [2024-06-17 01:32:16,596] [pool-1-thread-1] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir:
[testng] [2024-06-17 01:32:16,835] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif:
[testng] [2024-06-17 01:32:17,040] [pool-1-thread-12] Initializing /data/qa-17270/alexa488.ome.tif:
[testng] [2024-06-17 01:32:17,220] [pool-1-thread-2] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/matl.omp2info:
[testng] [2024-06-17 01:32:20,817] [pool-1-thread-8] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi:
[testng] [2024-06-17 01:32:20,983] [pool-1-thread-11] Initializing /data/qa-17270/stack1.oir:
[testng] [2024-06-17 01:32:24,695] [pool-1-thread-4] Initializing /data/qa-17335/OSR-Z.oir:
[testng] [2024-06-17 01:32:24,811] [pool-1-thread-9] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir:
[testng] [2024-06-17 01:32:24,993] [pool-1-thread-7] Initializing /data/olympus/40X_4CH_XY.oir:
[testng] [2024-06-17 01:32:25,329] [pool-1-thread-3] Initializing /data/olympus/Stitched_XYZ.vsi:
[testng] [2024-06-17 01:32:26,187] [pool-1-thread-6] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info:
[testng] [2024-06-17 01:32:29,920] [pool-1-thread-5] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif:
[testng] [2024-06-17 01:32:30,476] [pool-1-thread-8] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif:
[testng] [2024-06-17 01:32:30,514] [pool-1-thread-12] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir:
[testng] [2024-06-17 01:32:39,701] [pool-1-thread-3] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif:
[testng] [2024-06-17 01:32:40,620] [pool-1-thread-7] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.oir:
[testng] [2024-06-17 01:32:40,988] [pool-1-thread-4] Initializing /data/qa-21508/Stitch_A01_G008.oir:
[testng] [2024-06-17 01:32:41,463] [pool-1-thread-8] Initializing /data/qa-16881/P10-50 D2_0019.ome.tif:
[testng] [2024-06-17 01:32:41,575] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.oir:
[testng] [2024-06-17 01:32:41,734] [pool-1-thread-3] Initializing /data/qa-17331/60x zstack RS.ome.tif:
[testng] [2024-06-17 01:32:41,824] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Clipboard-Image_0099_0001.tif:
[testng] [2024-06-17 01:32:44,048] [pool-1-thread-9] Initializing /data/olympus/2017-04-20/mito_0006_0001.ome.tif:
[testng] [2024-06-17 01:32:44,343] [pool-1-thread-8] Initializing /data/olympus/_calcium sparks_XYt_/stack1/frame_t_0.ets:
[testng] [2024-06-17 01:32:44,655] [pool-1-thread-7] Initializing /data/olympus/calcium sparks_XYt.ome.tif:
[testng] [2024-06-17 01:32:44,819] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Clipboard-Image_0091_0001.tif:
[testng] [2024-06-17 01:32:44,947] [pool-1-thread-5] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.ome.tif:
[testng] [2024-06-17 01:32:45,610] [pool-1-thread-9] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/matl.omp2info:
[testng] [2024-06-17 01:32:55,712] [pool-1-thread-8] Initializing /data/olympus/Clipboard-stitched 4x4 zstack 10X_XYZ.tif:
[testng] [2024-06-17 01:32:56,074] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif:
[testng] [2024-06-17 01:32:56,516] [pool-1-thread-5] Initializing /data/qa-16881/P10-50 D2_0019.oir:
[testng] [2024-06-17 01:32:57,652] [pool-1-thread-7] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir:
[testng] [2024-06-17 01:33:00,112] [pool-1-thread-1] Initializing /data/olympus/Stitched_XYZ.ome.tif:
[testng] [2024-06-17 01:33:00,717] [pool-1-thread-8] Initializing /data/qa-16881/W11-180 D3 20151021_0024.oir:
[testng] [2024-06-17 01:33:01,051] [pool-1-thread-3] Initializing /data/public/etienne/coupe shg stack_0001.ome.tif:
[testng] [2024-06-17 01:33:03,548] [pool-1-thread-3] Initializing /data/qa-17335/Clipboard-stimulation_0001_LSM.tif:
[testng] [2024-06-17 01:33:03,788] [pool-1-thread-8] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif:
[testng] [2024-06-17 01:33:03,839] [pool-1-thread-4] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir:
[testng] [2024-06-17 01:33:04,868] [pool-1-thread-10] Initializing /data/public/etienne/venus stack.ome.tif:
[testng] [2024-06-17 01:33:05,771] [pool-1-thread-1] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir:
[testng] [2024-06-17 01:33:08,586] [pool-1-thread-5] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.ome.tif:
[testng] [2024-06-17 01:33:09,154] [pool-1-thread-8] Initializing /data/qa-17293/2-z-t_0001_LSM.ome.tif:
[testng] [2024-06-17 01:33:09,227] [pool-1-thread-3] Initializing /data/qa-17331/60x zstack RS.oir:
[testng] [2024-06-17 01:33:10,532] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/Clipboard.tif:
[testng] [2024-06-17 01:33:11,286] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.oir:
[testng] [2024-06-17 01:33:12,103] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.oir:
[testng] [2024-06-17 01:33:12,352] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir:
[testng] [2024-06-17 01:33:16,484] [pool-1-thread-8] Initializing /data/qa-17335/1.ome.tif:
[testng] [2024-06-17 01:33:16,751] [pool-1-thread-5] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/image_Cycle_02.oir:
[testng] [2024-06-17 01:33:17,263] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Clipboard-Image_0050_0001.tif:
[testng] [2024-06-17 01:33:17,604] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.oir:
[testng] [2024-06-17 01:33:17,709] [pool-1-thread-8] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0024.tif:
[testng] [2024-06-17 01:33:18,386] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.oir:
[testng] [2024-06-17 01:33:18,694] [pool-1-thread-5] Initializing /data/olympus/40X_4CH_XY.ome.tif:
[testng] [2024-06-17 01:33:18,757] [pool-1-thread-4] Initializing /data/qa-17270/Clipboard-stack1.tif:
[testng] [2024-06-17 01:33:18,812] [pool-1-thread-3] Initializing /data/martin/20170824_JupGFP_HisRFP_wL3_30xSI_4xzoom_0p5z_A01_G001_0001.oir:
[testng] [2024-06-17 01:34:25,122] [pool-1-thread-8] Initializing /data/qa-17335/Clipboard-1.tif:
[testng] [2024-06-17 01:34:25,712] [pool-1-thread-7] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi:
[testng] [2024-06-17 01:34:25,970] [pool-1-thread-4] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.ome.tif:
[testng] [2024-06-17 01:34:26,656] [pool-1-thread-8] Initializing /data/olympus/Clipboard-40X_4CH_XY.tif:
[testng] [2024-06-17 01:34:27,240] [pool-1-thread-7] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0019.tif:
[testng] [2024-06-17 01:34:27,380] [pool-1-thread-4] Initializing /data/qa-16881/Clipboard-P10-50 D2.tif:
[testng] [2024-06-17 01:34:27,980] [pool-1-thread-8] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0024.tif:
[testng] [2024-06-17 01:34:28,537] [pool-1-thread-7] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif:
[testng] [2024-06-17 01:34:28,618] [pool-1-thread-5] Initializing /data/qa-16881/P10-50 D2_0006.oir:
[testng] [2024-06-17 01:34:29,443] [pool-1-thread-4] Initializing /data/qa-16881/P10-50 D2.oir:
[testng] [2024-06-17 01:34:30,871] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/zebra shg.oir:
[testng] [2024-06-17 01:34:40,280] [pool-1-thread-7] Initializing /data/qa-16881/Clipboard-W1-75 D11 New 20150825_0004.tif:
[testng] [2024-06-17 01:34:41,471] [pool-1-thread-7] Initializing /data/qa-16881/Clipboard-W4-0 D14 New 20150828_0007.tif:
[testng] [2024-06-17 01:34:42,677] [pool-1-thread-7] Initializing /data/olympus/2017-11-20/xytz_golgi/xytz_golgi.oir:
[testng] [2024-06-17 01:34:48,210] [pool-1-thread-11] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.oir:
[testng] [2024-06-17 01:34:50,210] [pool-1-thread-4] Initializing /data/qa-16881/W11-180 D3 20151021_0024.ome.tif:
[testng] [2024-06-17 01:34:50,286] [pool-1-thread-5] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif:
[testng] [2024-06-17 01:34:51,483] [pool-1-thread-4] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir:
[testng] [2024-06-17 01:34:56,289] [pool-1-thread-1] Initializing /data/olympus/XYZt.vsi:
[testng] [2024-06-17 01:34:57,065] [pool-1-thread-1] Initializing /data/qa-17409/Stitch_A01_G001.oir:
[testng] [2024-06-17 01:35:03,862] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.oir:
[testng] [2024-06-17 01:35:04,171] [pool-1-thread-10] Initializing /data/olympus/Stitched_XYZ.oir:
[testng] [2024-06-17 01:35:07,698] [pool-1-thread-6] Initializing /data/qa-17270/Clipboard-image1.tif:
[testng] [2024-06-17 01:35:08,477] [pool-1-thread-5] Initializing /data/qa-17293/Clipboard.tif:
[testng] [2024-06-17 01:35:08,869] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-LILY POLLEN.tif:
[testng] [2024-06-17 01:35:09,158] [pool-1-thread-11] Initializing /data/qa-16881/Clipboard-P10D1 20150729.tif:
[testng] [2024-06-17 01:35:09,777] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif:
[testng] [2024-06-17 01:35:10,316] [pool-1-thread-6] Initializing /data/qa-17922/example_multipart.oir:
[testng] [2024-06-17 01:35:52,842] [pool-1-thread-11] Initializing /data/qa-17335/OSR-Z.ome.tif:
[testng] [2024-06-17 01:35:52,898] [pool-1-thread-5] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z_CONTROL.oir:
[testng] [2024-06-17 01:35:55,860] [pool-1-thread-11] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi:
[testng] [2024-06-17 01:35:56,152] [pool-1-thread-11] Initializing /data/qa-16881/P10D1 20150729_0019.ome.tif:
[testng] [2024-06-17 01:35:57,377] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.oir:
[testng] [2024-06-17 01:36:11,403] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-P10-50 D2_0006.tif:
[testng] [2024-06-17 01:36:11,959] [pool-1-thread-4] Initializing /data/qa-17293/2-z-t_0001_LSM.oir:
[testng] [2024-06-17 01:36:12,728] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Clipboard-Image_0001_0001.tif:
[testng] [2024-06-17 01:36:13,372] [pool-1-thread-10] Initializing /data/qa-17335/Clipboard-OSR-Z.tif:
[testng] [2024-06-17 01:36:13,892] [pool-1-thread-5] Initializing /data/olympus/calcium sparks.jpg:
[testng] [2024-06-17 01:36:14,557] [pool-1-thread-10] Initializing /data/cudmore/20190401__0005.oir:
[testng] [2024-06-17 01:36:30,558] [pool-1-thread-1] Initializing /data/olympus/2017-11-20/fish_overview/fish-overview-night.oir:
[testng] [2024-06-17 01:36:39,669] [pool-1-thread-7] Initializing /data/qa-17270/image1.ome.tif:
[testng] [2024-06-17 01:36:40,724] [pool-1-thread-7] Initializing /data/public/etienne/amy slice z stack_0001.oir:
[testng] [2024-06-17 01:36:41,592] [pool-1-thread-4] Initializing /data/qa-17919/f10187.oir:
[testng] [2024-06-17 01:37:30,507] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif:
[testng] [2024-06-17 01:37:30,579] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif:
[testng] [2024-06-17 01:37:30,677] [pool-1-thread-5] Initializing /data/olympus/2021-04-20/overview 2 x_Cycle_01/matl.omp2info:
[testng] [2024-06-17 01:37:31,568] [pool-1-thread-8] Initializing /data/public/etienne/amy slice z stack_0001.ome.tif:
[testng] [2024-06-17 01:37:31,849] [pool-1-thread-11] Initializing /data/olympus/40X_4CH_XY.vsi:
[testng] [2024-06-17 01:37:32,847] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif:
[testng] [2024-06-17 01:37:33,090] [pool-1-thread-5] Initializing /data/olympus/2017-04-20/mito_0006_0001.oir:
[testng] [2024-06-17 01:37:34,039] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif:
[testng] [2024-06-17 01:37:34,244] [pool-1-thread-11] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.ome.tif:
[testng] [2024-06-17 01:37:34,452] [pool-1-thread-8] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir:
[testng] [2024-06-17 01:37:36,452] [pool-1-thread-11] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png:
[testng] [2024-06-17 01:37:36,594] [pool-1-thread-7] Initializing /data/qa-16881/W11-180 D3 20151021_0006.oir:
[testng] [2024-06-17 01:37:36,826] [pool-1-thread-5] Initializing /data/olympus/calcium sparks_XYt.oir:
[testng] [2024-06-17 01:37:41,880] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif:
[testng] [2024-06-17 01:37:42,973] [pool-1-thread-11] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif:
[testng] [2024-06-17 01:37:43,641] [pool-1-thread-7] Initializing /data/qa-16881/P10D1 20150729_0024.ome.tif:
[testng] [2024-06-17 01:37:44,236] [pool-1-thread-11] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir:
[testng] [2024-06-17 01:37:46,283] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.oir:
[testng] [2024-06-17 01:37:53,208] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-Caged Glu-3 point.tif:
[testng] [2024-06-17 01:37:54,521] [pool-1-thread-8] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir:
[testng] [2024-06-17 01:37:57,991] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.ome.tif:
[testng] [2024-06-17 01:37:58,809] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.ome.tif:
[testng] [2024-06-17 01:37:58,886] [pool-1-thread-8] Initializing /data/qa-17222/ps245 red tubulin green 60x-1.oir.vsi:
[testng] [2024-06-17 01:37:59,677] [pool-1-thread-11] Initializing /data/olympus/Clipboard-calcium sparks_XYt.tif:
[testng] [2024-06-17 01:38:00,288] [pool-1-thread-8] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif:
[testng] [2024-06-17 01:38:00,871] [pool-1-thread-11] Initializing /data/olympus/XYZt.ome.tif:
[testng] [2024-06-17 01:38:01,619] [pool-1-thread-8] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir:
[testng] [2024-06-17 01:38:03,589] [pool-1-thread-11] Initializing /data/qa-16881/P10D1 20150729_0024.oir:
[testng] [2024-06-17 01:38:09,139] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.ome.tif:
[testng] [2024-06-17 01:38:10,546] [pool-1-thread-8] Initializing /data/qa-16881/P10-50 D2_0006.ome.tif:
[testng] [2024-06-17 01:38:11,785] [pool-1-thread-8] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif:
[testng] [2024-06-17 01:38:12,980] [pool-1-thread-8] Initializing /data/qa-16881/P10D1 20150729.ome.tif:
[testng] [2024-06-17 01:38:14,330] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Clipboard-Image_0033_0001.tif:
[testng] [2024-06-17 01:38:15,289] [pool-1-thread-11] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.ome.tif:
[testng] [2024-06-17 01:38:15,592] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.oir:
[testng] [2024-06-17 01:38:24,636] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.oir:
[testng] [2024-06-17 01:38:25,560] [pool-1-thread-2] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0001.tif:
[testng] [2024-06-17 01:38:26,247] [pool-1-thread-11] Initializing /data/olympus/XYZt.oir:
[testng] [2024-06-17 01:38:45,000] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif:
[testng] [2024-06-17 01:38:45,039] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir:
[testng] [2024-06-17 01:38:45,400] [pool-1-thread-2] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif:
[testng] [2024-06-17 01:38:46,004] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.oir:
[testng] [2024-06-17 01:38:46,371] [pool-1-thread-7] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir:
[testng] [2024-06-17 01:38:46,927] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir:
[testng] [2024-06-17 01:38:47,430] [pool-1-thread-5] Initializing /data/olympus/spectral_scan_XYL.ome.tif:
[testng] [2024-06-17 01:38:48,206] [pool-1-thread-2] Initializing /data/qa-17335/stimulation_0001_LSM.oir:
[testng] [2024-06-17 01:38:52,005] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif:
[testng] [2024-06-17 01:38:52,109] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif:
[testng] [2024-06-17 01:38:53,014] [pool-1-thread-5] Initializing /data/qa-16871/XY_0003.oir:
[testng] [2024-06-17 01:38:53,114] [pool-1-thread-7] Initializing /data/qa-16871/XY_0003.ome.tif:
[testng] [2024-06-17 01:38:53,927] [pool-1-thread-5] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir:
[testng] [2024-06-17 01:38:57,210] [pool-1-thread-7] Initializing /data/qa-17409/Clipboard.tif:
[testng] [2024-06-17 01:38:58,404] [pool-1-thread-7] Initializing /data/qa-17917/f10010.oir:
[testng] [2024-06-17 01:40:31,810] [pool-1-thread-12] Initializing /data/qa-17335/1.oir:
[testng] [2024-06-17 01:40:32,646] [pool-1-thread-12] Initializing /data/qa-17331/Clipboard.tif:
[testng] [2024-06-17 01:40:33,875] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-PA-GFPv-2.tif:
[testng] [2024-06-17 01:40:35,130] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.ome.tif:
[testng] [2024-06-17 01:40:35,982] [pool-1-thread-12] Initializing /data/public/etienne/venus stack.oir:
[testng] [2024-06-17 01:40:49,785] [pool-1-thread-2] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 9858, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 66 minutes 5 seconds
Finished: SUCCESS