Started by upstream project "BIOFORMATS-test-repo" build number 95
originally caused by:
Started by upstream project "Trigger" build number 106
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@9
[BIOFORMATS-test-folder@9] $ /bin/bash -xe /tmp/jenkins13928915856808801722.sh
+ '[' targa = slidebook ']'
++ date +%u
+ '[' 1 -le 1 ']'
+ DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR'
+ sudo docker run --rm --name BIOFORMATS-test-folder_14607_merge_ci -v /uod/idr/repos/curated/targa:/data -v /uod/idr-scratch/merge-ci/curated/targa:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 01:29:36,753 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 01:29:36,755 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service.
[testng] 01:29:36,755 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:29:36,757 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:29:36,757 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 01:29:36,757 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 01:29:36,757 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 01:29:36,757 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:29:36,758 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:29:36,758 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 01:29:36,758 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 01:29:36,758 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 01:29:37,052 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 01:29:37,052 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 01:29:37,084 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 01:29:37,085 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 01:29:37,096 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 01:29:37,096 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 01:29:37,096 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 01:29:37,096 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 01:29:37,097 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration.
[testng] 01:29:37,098 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point
[testng] 01:29:37,098 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 340 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-06-17 01:29:37,111] [main] java.version = 1.8.0_342
[testng] 01:29:37,116 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 01:29:37,116 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:37,180 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-17_01-29-37.log]
[testng] 01:29:37,182 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
[testng] [2024-06-17 01:29:37,186] [main] testng.directory = /data
[testng] [2024-06-17 01:29:37,186] [main] testng.configDirectory = /config
[testng] [2024-06-17 01:29:37,204] [main] testng.multiplier = 1.0
[testng] [2024-06-17 01:29:37,204] [main] testng.in-memory = false
[testng] [2024-06-17 01:29:37,204] [main] testng.allow-missing = false
[testng] [2024-06-17 01:29:37,204] [main] user.language = fr
[testng] [2024-06-17 01:29:37,204] [main] user.country = FR
[testng] [2024-06-17 01:29:37,205] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2024-06-17 01:29:37,723] [main] ----------------------------------------
[testng] [2024-06-17 01:29:37,723] [main] Total files: 21
[testng] [2024-06-17 01:29:37,724] [main] Scan time: 0.518 s (24 ms/file)
[testng] [2024-06-17 01:29:37,724] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 21 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-06-17 01:29:39,342] [pool-1-thread-1] Initializing /data/samples/UTC16.TGA:
[testng] 01:29:39,342 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 01:29:39,342 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:39,344 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-17_01-29-39.log]
[testng] 01:29:39,344 |-INFO in ch.qos.logback.core.sift.SiftProcessor@77733770 - End of configuration.
[testng] [2024-06-17 01:29:39,365] [pool-1-thread-12] Initializing /data/samples/UBW8.TGA:
[testng] 01:29:39,365 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 01:29:39,365 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:39,366 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-06-17_01-29-39.log]
[testng] 01:29:39,366 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1663b109 - End of configuration.
[testng] [2024-06-17 01:29:39,404] [pool-1-thread-11] Initializing /data/samples/XING_T24.TGA:
[testng] 01:29:39,404 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 01:29:39,404 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:39,405 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-17_01-29-39.log]
[testng] 01:29:39,406 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4eabb488 - End of configuration.
[testng] [2024-06-17 01:29:39,417] [pool-1-thread-10] Initializing /data/samples/FLAG_T32.TGA:
[testng] 01:29:39,417 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 01:29:39,417 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:39,418 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-17_01-29-39.log]
[testng] 01:29:39,419 |-INFO in ch.qos.logback.core.sift.SiftProcessor@191961cb - End of configuration.
[testng] [2024-06-17 01:29:39,436] [pool-1-thread-9] Initializing /data/samples/FLAG_B32.TGA:
[testng] 01:29:39,439 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 01:29:39,439 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:39,439 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-17_01-29-39.log]
[testng] 01:29:39,440 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7648c1a7 - End of configuration.
[testng] [2024-06-17 01:29:39,449] [pool-1-thread-8] Initializing /data/samples/CTC24.TGA:
[testng] 01:29:39,449 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 01:29:39,449 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:39,450 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-17_01-29-39.log]
[testng] 01:29:39,450 |-INFO in ch.qos.logback.core.sift.SiftProcessor@ce62f48 - End of configuration.
[testng] [2024-06-17 01:29:39,458] [pool-1-thread-7] Initializing /data/samples/XING_B24.TGA:
[testng] 01:29:39,459 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 01:29:39,459 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:39,459 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-17_01-29-39.log]
[testng] 01:29:39,460 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6fbf300b - End of configuration.
[testng] [2024-06-17 01:29:39,467] [pool-1-thread-6] Initializing /data/samples/CTC16.TGA:
[testng] 01:29:39,468 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 01:29:39,468 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:39,468 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-17_01-29-39.log]
[testng] 01:29:39,469 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5c25e79d - End of configuration.
[testng] [2024-06-17 01:29:39,475] [pool-1-thread-5] Initializing /data/samples/FLAG_T16.TGA:
[testng] 01:29:39,475 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 01:29:39,475 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:39,476 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-17_01-29-39.log]
[testng] 01:29:39,476 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5127b3af - End of configuration.
[testng] [2024-06-17 01:29:39,483] [pool-1-thread-4] Initializing /data/samples/FLAG_B24.TGA:
[testng] 01:29:39,484 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 01:29:39,484 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:39,484 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-17_01-29-39.log]
[testng] 01:29:39,485 |-INFO in ch.qos.logback.core.sift.SiftProcessor@cf769f6 - End of configuration.
[testng] [2024-06-17 01:29:39,492] [pool-1-thread-3] Initializing /data/samples/XING_T32.TGA:
[testng] 01:29:39,492 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 01:29:39,492 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:39,492 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-17_01-29-39.log]
[testng] 01:29:39,493 |-INFO in ch.qos.logback.core.sift.SiftProcessor@518ce96e - End of configuration.
[testng] [2024-06-17 01:29:39,501] [pool-1-thread-2] Initializing /data/samples/CBW8.TGA:
[testng] 01:29:39,501 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 01:29:39,501 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:39,501 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-17_01-29-39.log]
[testng] 01:29:39,502 |-INFO in ch.qos.logback.core.sift.SiftProcessor@69adbe65 - End of configuration.
[testng] [2024-06-17 01:29:41,265] [pool-1-thread-4] Initializing /data/samples/XING_B32.TGA:
[testng] [2024-06-17 01:29:41,273] [pool-1-thread-8] Initializing /data/samples/MARBLES.TGA:
[testng] [2024-06-17 01:29:41,286] [pool-1-thread-6] Initializing /data/samples/CCM8.TGA:
[testng] [2024-06-17 01:29:41,292] [pool-1-thread-5] Initializing /data/samples/XING_T16.TGA:
[testng] [2024-06-17 01:29:41,299] [pool-1-thread-1] Initializing /data/samples/UTC32.TGA:
[testng] [2024-06-17 01:29:41,308] [pool-1-thread-9] Initializing /data/samples/XING_B16.TGA:
[testng] [2024-06-17 01:29:41,316] [pool-1-thread-7] Initializing /data/samples/UCM8.TGA:
[testng] [2024-06-17 01:29:41,322] [pool-1-thread-11] Initializing /data/samples/UTC24.TGA:
[testng] [2024-06-17 01:29:41,330] [pool-1-thread-3] Initializing /data/samples/FLAG_B16.TGA:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 1113, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 9 seconds
Finished: SUCCESS