Started by upstream project "BIOFORMATS-test-repo" build number 2
originally caused by:
Started by upstream project "Trigger" build number 3
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5
[BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins8935339539319192996.sh
+ '[' lim = slidebook ']'
++ date +%u
+ '[' 5 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_149_merge_ci -v /uod/idr/repos/curated/lim:/data -v /uod/idr-scratch/merge-ci/curated/lim:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 00:20:37,868 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 00:20:37,869 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service.
[testng] 00:20:37,869 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 00:20:37,870 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 00:20:37,871 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 00:20:37,871 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 00:20:37,871 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 00:20:37,871 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 00:20:37,872 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 00:20:37,872 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 00:20:37,872 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 00:20:37,872 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 00:20:38,100 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 00:20:38,100 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 00:20:38,128 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 00:20:38,128 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 00:20:38,136 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 00:20:38,136 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 00:20:38,136 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 00:20:38,137 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 00:20:38,137 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration.
[testng] 00:20:38,137 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point
[testng] 00:20:38,137 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 265 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-03-15 00:20:38,147] [main] java.version = 1.8.0_342
[testng] 00:20:38,151 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 00:20:38,151 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:20:38,197 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-03-15_00-20-38.log]
[testng] 00:20:38,199 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
[testng] [2024-03-15 00:20:38,201] [main] testng.directory = /data
[testng] [2024-03-15 00:20:38,201] [main] testng.configDirectory = /config
[testng] [2024-03-15 00:20:38,214] [main] testng.multiplier = 1.0
[testng] [2024-03-15 00:20:38,215] [main] testng.in-memory = false
[testng] [2024-03-15 00:20:38,215] [main] testng.allow-missing = false
[testng] [2024-03-15 00:20:38,215] [main] user.language = en
[testng] [2024-03-15 00:20:38,215] [main] user.country = ${user.country}
[testng] [2024-03-15 00:20:38,215] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2024-03-15 00:20:38,669] [main] ----------------------------------------
[testng] [2024-03-15 00:20:38,669] [main] Total files: 21
[testng] [2024-03-15 00:20:38,669] [main] Scan time: 0.454 s (21 ms/file)
[testng] [2024-03-15 00:20:38,670] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 20 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-03-15 00:20:41,384] [pool-1-thread-1] Initializing /data/venu/Kontrolle0015.lim:
[testng] 00:20:41,385 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 00:20:41,385 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:20:41,386 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-03-15_00-20-41.log]
[testng] 00:20:41,386 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1cde2721 - End of configuration.
[testng] [2024-03-15 00:20:41,505] [pool-1-thread-12] Initializing /data/venu/Kontrolle0020.lim:
[testng] 00:20:41,506 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 00:20:41,506 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:20:41,507 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-03-15_00-20-41.log]
[testng] 00:20:41,507 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4a3f7b29 - End of configuration.
[testng] [2024-03-15 00:20:41,590] [pool-1-thread-11] Initializing /data/venu/Kontrolle0019.lim:
[testng] 00:20:41,590 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 00:20:41,590 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:20:41,591 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-03-15_00-20-41.log]
[testng] 00:20:41,591 |-INFO in ch.qos.logback.core.sift.SiftProcessor@79cc60a8 - End of configuration.
[testng] [2024-03-15 00:20:41,665] [pool-1-thread-10] Initializing /data/venu/Kontrolle0017.lim:
[testng] 00:20:41,666 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 00:20:41,666 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:20:41,666 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-03-15_00-20-41.log]
[testng] 00:20:41,667 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6b7af3b5 - End of configuration.
[testng] [2024-03-15 00:20:41,743] [pool-1-thread-9] Initializing /data/venu/Kontrolle0016.lim:
[testng] 00:20:41,743 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 00:20:41,743 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:20:41,744 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-03-15_00-20-41.log]
[testng] 00:20:41,744 |-INFO in ch.qos.logback.core.sift.SiftProcessor@74a0e4b8 - End of configuration.
[testng] [2024-03-15 00:20:41,841] [pool-1-thread-8] Initializing /data/venu/Kontrolle0008.lim:
[testng] 00:20:41,841 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 00:20:41,841 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:20:41,842 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-03-15_00-20-41.log]
[testng] 00:20:41,842 |-INFO in ch.qos.logback.core.sift.SiftProcessor@b6e8c80 - End of configuration.
[testng] [2024-03-15 00:20:41,937] [pool-1-thread-7] Initializing /data/venu/Kontrolle0001.lim:
[testng] 00:20:41,937 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 00:20:41,937 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:20:41,938 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-03-15_00-20-41.log]
[testng] 00:20:41,939 |-INFO in ch.qos.logback.core.sift.SiftProcessor@54249d81 - End of configuration.
[testng] [2024-03-15 00:20:42,008] [pool-1-thread-6] Initializing /data/venu/Kontrolle0003.lim:
[testng] 00:20:42,008 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 00:20:42,008 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:20:42,009 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-03-15_00-20-42.log]
[testng] 00:20:42,009 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7940257c - End of configuration.
[testng] [2024-03-15 00:20:42,080] [pool-1-thread-5] Initializing /data/venu/Kontrolle0012.lim:
[testng] 00:20:42,080 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 00:20:42,080 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:20:42,081 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-03-15_00-20-42.log]
[testng] 00:20:42,081 |-INFO in ch.qos.logback.core.sift.SiftProcessor@40dfd862 - End of configuration.
[testng] [2024-03-15 00:20:42,178] [pool-1-thread-4] Initializing /data/venu/Kontrolle0009.lim:
[testng] 00:20:42,178 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 00:20:42,178 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:20:42,179 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-03-15_00-20-42.log]
[testng] 00:20:42,179 |-INFO in ch.qos.logback.core.sift.SiftProcessor@16948589 - End of configuration.
[testng] [2024-03-15 00:20:42,254] [pool-1-thread-3] Initializing /data/venu/Kontrolle0013.lim:
[testng] 00:20:42,254 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 00:20:42,254 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:20:42,255 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-03-15_00-20-42.log]
[testng] 00:20:42,255 |-INFO in ch.qos.logback.core.sift.SiftProcessor@38862b1e - End of configuration.
[testng] [2024-03-15 00:20:42,330] [pool-1-thread-2] Initializing /data/venu/Kontrolle0005.lim:
[testng] 00:20:42,331 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 00:20:42,331 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:20:42,331 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-03-15_00-20-42.log]
[testng] 00:20:42,332 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5c27e753 - End of configuration.
[testng] [2024-03-15 00:20:45,457] [pool-1-thread-7] Initializing /data/venu/Kontrolle0018.lim:
[testng] [2024-03-15 00:20:45,616] [pool-1-thread-1] Initializing /data/venu/Kontrolle0002.lim:
[testng] [2024-03-15 00:20:45,695] [pool-1-thread-3] Initializing /data/venu/Kontrolle0010.lim:
[testng] [2024-03-15 00:20:45,774] [pool-1-thread-8] Initializing /data/venu/Kontrolle0004.lim:
[testng] [2024-03-15 00:20:45,857] [pool-1-thread-12] Initializing /data/venu/Kontrolle0014.lim:
[testng] [2024-03-15 00:20:46,018] [pool-1-thread-6] Initializing /data/venu/Kontrolle0011.lim:
[testng] [2024-03-15 00:20:46,167] [pool-1-thread-11] Initializing /data/venu/Kontrolle0007.lim:
[testng] [2024-03-15 00:20:46,317] [pool-1-thread-2] Initializing /data/venu/Kontrolle0021.lim:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 1060, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 12 seconds
Finished: SUCCESS