Started by upstream project "BIOFORMATS-test-repo" build number 97
originally caused by:
 Started by upstream project "Trigger" build number 108
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5
[BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins653891134087947245.sh
+ '[' specs = slidebook ']'
++ date +%u
+ '[' 3 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_14924_merge_ci -v /uod/idr/repos/curated/specs:/data -v /uod/idr-scratch/merge-ci/curated/specs:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
   [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
   [testng] File leak detector installed
   [testng] 01:23:56,416 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 01:23:56,417 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service.
   [testng] 01:23:56,417 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:23:56,418 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:23:56,419 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 01:23:56,419 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 01:23:56,419 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 01:23:56,419 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:23:56,420 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:23:56,421 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 01:23:56,421 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 01:23:56,421 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 01:23:56,675 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 01:23:56,676 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 01:23:56,705 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 01:23:56,705 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 01:23:56,717 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 01:23:56,718 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 01:23:56,718 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 01:23:56,719 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 01:23:56,719 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration.
   [testng] 01:23:56,719 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point
   [testng] 01:23:56,720 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 300 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-06-19 01:23:56,753] [main] java.version = 17.0.2
   [testng] 01:23:56,759 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 01:23:56,759 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:23:56,829 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-19_01-23-56.log]
   [testng] 01:23:56,831 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration.
   [testng] [2024-06-19 01:23:56,834] [main] testng.directory = /data
   [testng] [2024-06-19 01:23:56,834] [main] testng.configDirectory = /config
   [testng] [2024-06-19 01:23:56,846] [main] testng.multiplier = 1.0
   [testng] [2024-06-19 01:23:56,848] [main] testng.in-memory = false
   [testng] [2024-06-19 01:23:56,848] [main] testng.allow-missing = false
   [testng] [2024-06-19 01:23:56,848] [main] user.language = en
   [testng] [2024-06-19 01:23:56,848] [main] user.country = ${user.country}
   [testng] [2024-06-19 01:23:56,848] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-06-19 01:24:09,848] [main] ----------------------------------------
   [testng] [2024-06-19 01:24:09,848] [main] Total files: 226
   [testng] [2024-06-19 01:24:09,848] [main] Scan time: 12.999 s (57 ms/file)
   [testng] [2024-06-19 01:24:09,848] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 28 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-06-19 01:24:16,793] [pool-1-thread-1] Initializing /data/iplab/Blend_DIC.IPL: 
   [testng] 01:24:16,794 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 01:24:16,794 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:24:16,796 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-19_01-24-16.log]
   [testng] 01:24:16,797 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6ea5ba2f - End of configuration.
   [testng] [2024-06-19 01:24:16,820] [pool-1-thread-12] Initializing /data/fluoview/Sample_TwoCH.TIF: 
   [testng] 01:24:16,820 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 01:24:16,820 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:24:16,822 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-06-19_01-24-16.log]
   [testng] 01:24:16,822 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1e5e8341 - End of configuration.
   [testng] [2024-06-19 01:24:16,882] [pool-1-thread-11] Initializing /data/zeiss_lsm/X-Y-Z-T-Ch-Tile-2.lsm: 
   [testng] 01:24:16,882 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 01:24:16,882 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:24:16,883 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-19_01-24-16.log]
   [testng] 01:24:16,884 |-INFO in ch.qos.logback.core.sift.SiftProcessor@8049b60 - End of configuration.
   [testng] [2024-06-19 01:24:17,000] [pool-1-thread-10] Initializing /data/iplab/3t3 Cell.IPL: 
   [testng] 01:24:17,001 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 01:24:17,001 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:24:17,002 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-19_01-24-17.log]
   [testng] 01:24:17,003 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4dacb45d - End of configuration.
   [testng] [2024-06-19 01:24:17,013] [pool-1-thread-9] Initializing /data/fluoview/sample_labled_XYTCh.tif: 
   [testng] 01:24:17,014 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 01:24:17,014 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:24:17,015 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-19_01-24-17.log]
   [testng] 01:24:17,015 |-INFO in ch.qos.logback.core.sift.SiftProcessor@d9df37 - End of configuration.
   [testng] [2024-06-19 01:24:17,040] [pool-1-thread-8] Initializing /data/fluoview/SpineAnimation.tif: 
   [testng] 01:24:17,040 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 01:24:17,040 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:24:17,041 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-19_01-24-17.log]
   [testng] 01:24:17,041 |-INFO in ch.qos.logback.core.sift.SiftProcessor@22e571ae - End of configuration.
   [testng] [2024-06-19 01:24:17,083] [pool-1-thread-7] Initializing /data/iplab/Chromosomes.IPL: 
   [testng] 01:24:17,083 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 01:24:17,083 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:24:17,084 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-19_01-24-17.log]
   [testng] 01:24:17,085 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2ad6c9be - End of configuration.
   [testng] [2024-06-19 01:24:17,093] [pool-1-thread-6] Initializing /data/fluoview/sample_labled_XYZTCh.tif: 
   [testng] 01:24:17,093 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 01:24:17,094 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:24:17,095 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-19_01-24-17.log]
   [testng] 01:24:17,095 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1469858c - End of configuration.
   [testng] [2024-06-19 01:24:17,143] [pool-1-thread-5] Initializing /data/fluoview/SpineAnimation.avi: 
   [testng] 01:24:17,143 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 01:24:17,143 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:24:17,144 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-19_01-24-17.log]
   [testng] 01:24:17,145 |-INFO in ch.qos.logback.core.sift.SiftProcessor@52a734d1 - End of configuration.
   [testng] [2024-06-19 01:24:17,177] [pool-1-thread-4] Initializing /data/iplab/10x Blood and Bacteria.IPL: 
   [testng] 01:24:17,178 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 01:24:17,178 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:24:17,179 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-19_01-24-17.log]
   [testng] 01:24:17,179 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6ce942fc - End of configuration.
   [testng] [2024-06-19 01:24:17,205] [pool-1-thread-3] Initializing /data/iplab/Blend_Dapi.IPL: 
   [testng] 01:24:17,205 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 01:24:17,205 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:24:17,206 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-19_01-24-17.log]
   [testng] 01:24:17,207 |-INFO in ch.qos.logback.core.sift.SiftProcessor@736f2edb - End of configuration.
   [testng] [2024-06-19 01:24:17,227] [pool-1-thread-2] Initializing /data/zeiss_lsm/X-Y-Z-T-Ch-Tile--MultiTrack-1.lsm: 
   [testng] 01:24:17,227 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 01:24:17,227 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:24:17,229 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-19_01-24-17.log]
   [testng] 01:24:17,229 |-INFO in ch.qos.logback.core.sift.SiftProcessor@27761594 - End of configuration.
   [testng] [2024-06-19 01:24:19,978] [pool-1-thread-1] Initializing /data/iplab/Color Histology.IPL: 
   [testng] [2024-06-19 01:24:19,987] [pool-1-thread-7] Initializing /data/fluoview/Sample_ThreeCH.TIF: 
   [testng] [2024-06-19 01:24:20,044] [pool-1-thread-10] Initializing /data/iplab/Color Image.IPL: 
   [testng] [2024-06-19 01:24:20,050] [pool-1-thread-9] Initializing /data/gatan/ImageReader2003/ImageReaderTest/TestFiles/test3.dm3: 
   [testng] [2024-06-19 01:24:20,059] [pool-1-thread-4] Initializing /data/fluoview/Sample_XYT.TIF: 
   [testng] [2024-06-19 01:24:20,093] [pool-1-thread-3] Initializing /data/iplab/16Bit XRay.IPL: 
   [testng] [2024-06-19 01:24:20,100] [pool-1-thread-6] Initializing /data/fluoview/sample_labled_XYZCh.tif: 
   [testng] [2024-06-19 01:24:20,124] [pool-1-thread-5] Initializing /data/zeiss_lsm/X-Y-Z-T-Ch-Tile-1.lsm: 
   [testng] [2024-06-19 01:24:20,261] [pool-1-thread-8] Initializing /data/iplab/Actin.IPL: 
   [testng] [2024-06-19 01:24:20,268] [pool-1-thread-12] Initializing /data/fluoview/Sample_XT.tif: 
   [testng] [2024-06-19 01:24:20,757] [pool-1-thread-8] Initializing /data/iplab/Blend_Fitc.IPL: 
   [testng] [2024-06-19 01:24:20,793] [pool-1-thread-1] Initializing /data/gatan/ImageReader2003/ImageReaderTest/TestFiles/Test.dm3: 
   [testng] [2024-06-19 01:24:20,809] [pool-1-thread-10] Initializing /data/fluoview/Sample_XYZ.TIF: 
   [testng] [2024-06-19 01:24:21,012] [pool-1-thread-3] Initializing /data/gatan/ImageReader2003/ImageReaderTest/TestFiles/Test2.dm3: 
   [testng] [2024-06-19 01:24:21,042] [pool-1-thread-9] Initializing /data/iplab/Blend_Final.IPL: 
   [testng] [2024-06-19 01:24:22,271] [pool-1-thread-1] Initializing /data/iplab/Blend_Tritc.IPL: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 1484, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 32 seconds
Finished: SUCCESS