Started by upstream project "<a href='/jenkins/job/BIOFORMATS-test-repo/' class='jenkins-table__link model-link model-link--float'>BIOFORMATS-test-repo</a>" build number <a href='/jenkins/job/BIOFORMATS-test-repo/99' class='jenkins-table__link model-link model-link--float'>99</a>
originally caused by:
 Started by upstream project "<a href='/jenkins/job/Trigger/' class='jenkins-table__link model-link model-link--float'>Trigger</a>" build number <a href='/jenkins/job/Trigger/110' class='jenkins-table__link model-link model-link--float'>110</a>
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on <a href='/jenkins/computer/docker' class='jenkins-table__link model-link model-link--float'>docker</a> (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5
[BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins5817236284104287258.sh
+ '[' amira = slidebook ']'
++ date +%u
+ '[' 5 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_15249_merge_ci -v /uod/idr/repos/curated/amira:/data -v /uod/idr-scratch/merge-ci/curated/amira:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test

test-automated:
   [testng] File leak detector installed
   [testng] 01:25:30,049 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 01:25:30,051 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service.
   [testng] 01:25:30,051 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:25:30,052 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:25:30,052 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 01:25:30,052 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 01:25:30,053 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 01:25:30,053 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:25:30,053 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:25:30,053 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 01:25:30,053 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 01:25:30,053 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 01:25:30,332 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 01:25:30,332 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 01:25:30,361 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 01:25:30,361 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 01:25:30,369 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 01:25:30,370 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 01:25:30,370 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 01:25:30,370 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 01:25:30,370 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration.
   [testng] 01:25:30,371 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point
   [testng] 01:25:30,371 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 318 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-06-21 01:25:30,384] [main] java.version = 1.8.0_342
   [testng] 01:25:30,388 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 01:25:30,388 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:30,466 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-21_01-25-30.log]
   [testng] 01:25:30,469 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
   [testng] [2024-06-21 01:25:30,471] [main] testng.directory = /data
   [testng] [2024-06-21 01:25:30,472] [main] testng.configDirectory = /config
   [testng] [2024-06-21 01:25:30,490] [main] testng.multiplier = 1.0
   [testng] [2024-06-21 01:25:30,490] [main] testng.in-memory = false
   [testng] [2024-06-21 01:25:30,491] [main] testng.allow-missing = false
   [testng] [2024-06-21 01:25:30,491] [main] user.language = en
   [testng] [2024-06-21 01:25:30,491] [main] user.country = ${user.country}
   [testng] [2024-06-21 01:25:30,491] [main] Maximum heap size = 13653 MB
   [testng] Scanning for files...
   [testng] [2024-06-21 01:25:31,519] [main] ----------------------------------------
   [testng] [2024-06-21 01:25:31,520] [main] Total files: 15
   [testng] [2024-06-21 01:25:31,520] [main] Scan time: 1.028 s (68 ms/file)
   [testng] [2024-06-21 01:25:31,520] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 12 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-06-21 01:25:32,862] [pool-1-thread-1] Initializing /data/samples/emptykey/test.am: 
   [testng] 01:25:32,862 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 01:25:32,863 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:32,864 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-21_01-25-32.log]
   [testng] 01:25:32,864 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6a168049 - End of configuration.
   [testng] [2024-06-21 01:25:32,896] [pool-1-thread-12] Initializing /data/public/ignacio/test.am: 
   [testng] 01:25:32,896 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 01:25:32,896 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:32,898 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-06-21_01-25-32.log]
   [testng] 01:25:32,898 |-INFO in ch.qos.logback.core.sift.SiftProcessor@14c1bcfe - End of configuration.
   [testng] [2024-06-21 01:25:32,911] [pool-1-thread-11] Initializing /data/jeremy/Virus_Membrane7-screenshot.PNG: 
   [testng] 01:25:32,911 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 01:25:32,911 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:32,912 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-21_01-25-32.log]
   [testng] 01:25:32,912 |-INFO in ch.qos.logback.core.sift.SiftProcessor@86b3af6 - End of configuration.
   [testng] [2024-06-21 01:25:32,917] [pool-1-thread-10] Initializing /data/public/imagesc-50585/BF_CheckMIB.am: 
   [testng] 01:25:32,917 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 01:25:32,917 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:32,918 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-21_01-25-32.log]
   [testng] 01:25:32,918 |-INFO in ch.qos.logback.core.sift.SiftProcessor@59237763 - End of configuration.
   [testng] [2024-06-21 01:25:32,931] [pool-1-thread-9] Initializing /data/jcb/201108088/Haberman-Fig4A-original.am: 
   [testng] 01:25:32,931 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 01:25:32,932 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:32,932 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-21_01-25-32.log]
   [testng] 01:25:32,933 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4c05b148 - End of configuration.
   [testng] [2024-06-21 01:25:32,976] [pool-1-thread-8] Initializing /data/johannes/template.labels: 
   [testng] 01:25:32,976 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 01:25:32,976 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:32,977 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-21_01-25-32.log]
   [testng] 01:25:32,978 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13080500 - End of configuration.
   [testng] [2024-06-21 01:25:32,992] [pool-1-thread-7] Initializing /data/johannes/template.grey: 
   [testng] 01:25:32,992 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 01:25:32,992 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:32,993 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-21_01-25-32.log]
   [testng] 01:25:32,993 |-INFO in ch.qos.logback.core.sift.SiftProcessor@278bc19 - End of configuration.
   [testng] [2024-06-21 01:25:33,029] [pool-1-thread-6] Initializing /data/public/imagesc-50585/BF_Check.tif: 
   [testng] 01:25:33,029 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 01:25:33,029 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:33,030 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-21_01-25-33.log]
   [testng] 01:25:33,030 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7d5f595e - End of configuration.
   [testng] [2024-06-21 01:25:33,057] [pool-1-thread-5] Initializing /data/jeremy/Virus_Membrane7.am: 
   [testng] 01:25:33,057 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 01:25:33,058 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:33,058 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-21_01-25-33.log]
   [testng] 01:25:33,059 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7f41ada2 - End of configuration.
   [testng] [2024-06-21 01:25:33,092] [pool-1-thread-4] Initializing /data/public/imagesc-50585/BF_CheckAmira.am: 
   [testng] 01:25:33,092 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 01:25:33,092 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:33,093 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-21_01-25-33.log]
   [testng] 01:25:33,093 |-INFO in ch.qos.logback.core.sift.SiftProcessor@854dc10 - End of configuration.
   [testng] [2024-06-21 01:25:33,106] [pool-1-thread-3] Initializing /data/jeremy/Hiv_spikes.am: 
   [testng] 01:25:33,106 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 01:25:33,106 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:33,107 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-21_01-25-33.log]
   [testng] 01:25:33,108 |-INFO in ch.qos.logback.core.sift.SiftProcessor@62af8dcb - End of configuration.
   [testng] [2024-06-21 01:25:33,127] [pool-1-thread-2] Initializing /data/ilya/test.am: 
   [testng] 01:25:33,127 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 01:25:33,127 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:25:33,128 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-21_01-25-33.log]
   [testng] 01:25:33,128 |-INFO in ch.qos.logback.core.sift.SiftProcessor@171bf1a6 - End of configuration.
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 636, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 11 seconds
Finished: SUCCESS