Started by upstream project "BIOFORMATS-test-repo" build number 99
originally caused by:
Started by upstream project "Trigger" build number 110
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@4
[BIOFORMATS-test-folder@4] $ /bin/bash -xe /tmp/jenkins11731841520539094280.sh
+ '[' noaa-hrd = slidebook ']'
++ date +%u
+ '[' 5 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_15335_merge_ci -v /uod/idr/repos/curated/noaa-hrd:/data -v /uod/idr-scratch/merge-ci/curated/noaa-hrd:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 02:18:45,070 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 02:18:45,127 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 02:18:45,184 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 02:18:45,184 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 02:18:45,203 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 02:18:45,203 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 02:18:45,203 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 02:18:45,204 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 02:18:45,205 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5c30a9b0 - End of configuration.
[testng] 02:18:45,207 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@7a69b07 - Registering current configuration as safe fallback point
[testng] 02:18:45,208 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5e82df6a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 485 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-06-21 02:18:45,227] [main] java.version = 1.8.0_342
[testng] 02:18:45,233 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 02:18:45,233 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:18:45,297 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-21_02-18-45.log]
[testng] 02:18:45,299 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
[testng] [2024-06-21 02:18:45,303] [main] testng.directory = /data
[testng] [2024-06-21 02:18:45,303] [main] testng.configDirectory = /config
[testng] [2024-06-21 02:18:45,319] [main] testng.multiplier = 1.0
[testng] [2024-06-21 02:18:45,319] [main] testng.in-memory = false
[testng] [2024-06-21 02:18:45,319] [main] testng.allow-missing = false
[testng] [2024-06-21 02:18:45,320] [main] user.language = en
[testng] [2024-06-21 02:18:45,320] [main] user.country = ${user.country}
[testng] [2024-06-21 02:18:45,320] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2024-06-21 02:18:46,813] [main] ----------------------------------------
[testng] [2024-06-21 02:18:46,813] [main] Total files: 9
[testng] [2024-06-21 02:18:46,814] [main] Scan time: 1.493 s (165 ms/file)
[testng] [2024-06-21 02:18:46,814] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 9 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-06-21 02:18:48,186] [pool-1-thread-1] Initializing /data/andrew/AL021992_0824_0900:
[testng] 02:18:48,187 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 02:18:48,187 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:18:48,188 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-21_02-18-48.log]
[testng] 02:18:48,188 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7e9989a3 - End of configuration.
[testng] [2024-06-21 02:18:48,319] [pool-1-thread-9] Initializing /data/andrew/AL021992_0824_1502marine:
[testng] 02:18:48,320 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 02:18:48,320 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:18:48,321 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-21_02-18-48.log]
[testng] 02:18:48,321 |-INFO in ch.qos.logback.core.sift.SiftProcessor@ff8f358 - End of configuration.
[testng] [2024-06-21 02:18:48,498] [pool-1-thread-8] Initializing /data/andrew/AL021992_0824_1502:
[testng] 02:18:48,498 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 02:18:48,498 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:18:48,499 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-21_02-18-48.log]
[testng] 02:18:48,499 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2c17ee9b - End of configuration.
[testng] [2024-06-21 02:18:48,598] [pool-1-thread-7] Initializing /data/andrew/AL021992_0824_1100:
[testng] 02:18:48,598 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 02:18:48,598 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:18:48,599 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-21_02-18-48.log]
[testng] 02:18:48,599 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7ecf3d5a - End of configuration.
[testng] [2024-06-21 02:18:48,683] [pool-1-thread-6] Initializing /data/andrew/AL021992_0824_0900marine:
[testng] 02:18:48,684 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 02:18:48,684 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:18:48,685 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-21_02-18-48.log]
[testng] 02:18:48,687 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4c7e5916 - End of configuration.
[testng] [2024-06-21 02:18:48,788] [pool-1-thread-5] Initializing /data/andrew/AL021992_0824_1100marine:
[testng] 02:18:48,789 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 02:18:48,789 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:18:48,789 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-21_02-18-48.log]
[testng] 02:18:48,790 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2e6e0cf - End of configuration.
[testng] [2024-06-21 02:18:48,873] [pool-1-thread-4] Initializing /data/iris/AL112001_1009_0130:
[testng] 02:18:48,873 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 02:18:48,873 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:18:48,874 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-21_02-18-48.log]
[testng] 02:18:48,875 |-INFO in ch.qos.logback.core.sift.SiftProcessor@32e119aa - End of configuration.
[testng] [2024-06-21 02:18:49,011] [pool-1-thread-3] Initializing /data/andrew/AL021992_0824_0400marine:
[testng] 02:18:49,011 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 02:18:49,011 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:18:49,012 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-21_02-18-49.log]
[testng] 02:18:49,013 |-INFO in ch.qos.logback.core.sift.SiftProcessor@962e084 - End of configuration.
[testng] [2024-06-21 02:18:49,184] [pool-1-thread-2] Initializing /data/andrew/AL021992_0824_0400:
[testng] 02:18:49,184 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 02:18:49,185 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:18:49,185 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-21_02-18-49.log]
[testng] 02:18:49,186 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4d02a39a - End of configuration.
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 477, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 10 seconds
Finished: SUCCESS