Started by upstream project "BIOFORMATS-test-repo" build number 99
originally caused by:
 Started by upstream project "Trigger" build number 110
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@4
[BIOFORMATS-test-folder@4] $ /bin/bash -xe /tmp/jenkins14038135900123293139.sh
+ '[' scanr = slidebook ']'
++ date +%u
+ '[' 5 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_15351_merge_ci -v /uod/idr/repos/curated/scanr:/data -v /uod/idr-scratch/merge-ci/curated/scanr:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test

test-automated:
   [testng] File leak detector installed
   [testng] 02:24:57,530 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 02:24:57,572 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 02:24:57,604 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 02:24:57,604 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 02:24:57,618 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 02:24:57,620 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 02:24:57,620 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 02:24:57,624 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 02:24:57,625 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5c30a9b0 - End of configuration.
   [testng] 02:24:57,632 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@7a69b07 - Registering current configuration as safe fallback point
   [testng] 02:24:57,633 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5e82df6a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 429 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-06-21 02:24:57,698] [main] java.version = 1.8.0_342
   [testng] 02:24:57,725 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 02:24:57,726 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:24:57,798 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-21_02-24-57.log]
   [testng] 02:24:57,800 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
   [testng] [2024-06-21 02:24:57,803] [main] testng.directory = /data
   [testng] [2024-06-21 02:24:57,804] [main] testng.configDirectory = /config
   [testng] [2024-06-21 02:24:57,820] [main] testng.multiplier = 1.0
   [testng] [2024-06-21 02:24:57,821] [main] testng.in-memory = false
   [testng] [2024-06-21 02:24:57,821] [main] testng.allow-missing = false
   [testng] [2024-06-21 02:24:57,821] [main] user.language = en
   [testng] [2024-06-21 02:24:57,821] [main] user.country = ${user.country}
   [testng] [2024-06-21 02:24:57,822] [main] Maximum heap size = 13653 MB
   [testng] Scanning for files...
   [testng] [2024-06-21 02:30:18,718] [main] ----------------------------------------
   [testng] [2024-06-21 02:30:18,718] [main] Total files: 2169
   [testng] [2024-06-21 02:30:18,719] [main] Scan time: 320.896 s (147 ms/file)
   [testng] [2024-06-21 02:30:18,719] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 17 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-06-21 02:48:06,279] [pool-1-thread-1] Initializing /data/juergen/Experiment/experiment_descriptor.xml: 
   [testng] 02:48:06,280 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 02:48:06,280 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:48:06,281 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-21_02-48-06.log]
   [testng] 02:48:06,281 |-INFO in ch.qos.logback.core.sift.SiftProcessor@53356c70 - End of configuration.
   [testng] [2024-06-21 02:48:06,503] [pool-1-thread-12] Initializing /data/ruben/161009test2/151009_002/experiment_descriptor.xml: 
   [testng] 02:48:06,503 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 02:48:06,504 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:48:06,505 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-06-21_02-48-06.log]
   [testng] 02:48:06,505 |-INFO in ch.qos.logback.core.sift.SiftProcessor@45d3c43d - End of configuration.
   [testng] [2024-06-21 02:51:01,714] [pool-1-thread-11] Initializing /data/ruben/TestPlate_Mock_01_001/experiment_descriptor.xml: 
   [testng] 02:51:01,714 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 02:51:01,714 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:51:01,715 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-21_02-51-01.log]
   [testng] 02:51:01,716 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2d491346 - End of configuration.
   [testng] [2024-06-21 02:51:02,114] [pool-1-thread-10] Initializing /data/ruben/280809_8wellLT_008/experiment_descriptor.xml: 
   [testng] 02:51:02,115 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 02:51:02,115 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:51:02,116 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-21_02-51-02.log]
   [testng] 02:51:02,116 |-INFO in ch.qos.logback.core.sift.SiftProcessor@ddf004f - End of configuration.
   [testng] [2024-06-21 02:51:02,270] [pool-1-thread-9] Initializing /data/ruben/plate_002/experiment_descriptor.xml: 
   [testng] 02:51:02,270 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 02:51:02,270 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:51:02,271 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-21_02-51-02.log]
   [testng] 02:51:02,271 |-INFO in ch.qos.logback.core.sift.SiftProcessor@159c9152 - End of configuration.
   [testng] [2024-06-21 02:51:02,344] [pool-1-thread-8] Initializing /data/jcb/201301120/p17/experiment_descriptor.xml: 
   [testng] 02:51:02,344 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 02:51:02,344 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:51:02,345 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-21_02-51-02.log]
   [testng] 02:51:02,345 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2dbe3bc4 - End of configuration.
   [testng] [2024-06-21 02:52:51,720] [pool-1-thread-7] Initializing /data/embl/Maik_001/experiment_descriptor.xml: 
   [testng] 02:52:51,720 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 02:52:51,720 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:52:51,722 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-21_02-52-51.log]
   [testng] 02:52:51,722 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4be3a213 - End of configuration.
   [testng] [2024-06-21 02:53:00,814] [pool-1-thread-6] Initializing /data/ruben/scanr_no_labels/Peter/experiment_descriptor.xml: 
   [testng] 02:53:00,815 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 02:53:00,815 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:53:00,816 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-21_02-53-00.log]
   [testng] 02:53:00,817 |-INFO in ch.qos.logback.core.sift.SiftProcessor@54200571 - End of configuration.
   [testng] [2024-06-21 02:53:01,917] [pool-1-thread-5] Initializing /data/gideon/experiment_descriptor.xml: 
   [testng] 02:53:01,917 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 02:53:01,917 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:53:01,918 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-21_02-53-01.log]
   [testng] 02:53:01,936 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6449ee0c - End of configuration.
   [testng] [2024-06-21 02:53:38,506] [pool-1-thread-4] Initializing /data/embl/170309_Sec13_GM130m_001/experiment_descriptor.xml: 
   [testng] 02:53:38,507 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 02:53:38,507 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:53:38,508 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-21_02-53-38.log]
   [testng] 02:53:38,508 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6dc08185 - End of configuration.
   [testng] [2024-06-21 02:54:50,989] [pool-1-thread-3] Initializing /data/ruben/12-05-25_009/experiment_descriptor.xml: 
   [testng] 02:54:50,990 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 02:54:50,990 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:54:50,991 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-21_02-54-50.log]
   [testng] 02:54:50,991 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6b1426d2 - End of configuration.
   [testng] [2024-06-21 02:55:11,845] [pool-1-thread-2] Initializing /data/ruben/20100827_004/experiment_descriptor.xml: 
   [testng] 02:55:11,845 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 02:55:11,845 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:55:11,846 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-21_02-55-11.log]
   [testng] 02:55:11,847 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7dcf42bb - End of configuration.
   [testng] [2024-06-21 02:56:53,864] [pool-1-thread-1] Initializing /data/nadine/experiment_descriptor.xml: 
   [testng] [2024-06-21 02:56:58,160] [pool-1-thread-1] Initializing /data/public/idr0009/0307-10--2007-05-30/experiment_descriptor.xml: 
   [testng] [2024-06-21 02:58:18,437] [pool-1-thread-10] Initializing /data/jcb/201301120/p2/experiment_descriptor.xml: 
   [testng] [2024-06-21 03:00:15,273] [pool-1-thread-7] Initializing /data/christian/example/experiment_descriptor.xml: 
   [testng] [2024-06-21 03:00:15,806] [pool-1-thread-9] Initializing /data/ruben/161009test2/151009_001/experiment_descriptor.xml: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 901, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 42 minutes 25 seconds
Finished: SUCCESS