Started by upstream project "BIOFORMATS-test-repo" build number 99
originally caused by:
 Started by upstream project "Trigger" build number 110
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder
[BIOFORMATS-test-folder] $ /bin/bash -xe /tmp/jenkins8043356748088691472.sh
+ '[' cellr = slidebook ']'
++ date +%u
+ '[' 5 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_15375_merge_ci -v /uod/idr/repos/curated/cellr:/data -v /uod/idr-scratch/merge-ci/curated/cellr:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test

test-automated:
   [testng] File leak detector installed
   [testng] 02:47:58,782 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 02:47:58,784 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service.
   [testng] 02:47:58,784 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 02:47:58,785 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 02:47:58,785 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 02:47:58,785 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 02:47:58,785 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 02:47:58,785 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 02:47:58,786 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 02:47:58,786 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 02:47:58,786 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 02:47:58,786 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 02:47:59,012 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 02:47:59,012 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 02:47:59,043 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 02:47:59,043 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 02:47:59,051 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 02:47:59,052 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 02:47:59,052 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 02:47:59,052 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 02:47:59,052 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration.
   [testng] 02:47:59,053 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point
   [testng] 02:47:59,053 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 267 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-06-21 02:47:59,064] [main] java.version = 1.8.0_342
   [testng] 02:47:59,067 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 02:47:59,068 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:47:59,113 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-21_02-47-59.log]
   [testng] 02:47:59,115 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
   [testng] [2024-06-21 02:47:59,117] [main] testng.directory = /data
   [testng] [2024-06-21 02:47:59,117] [main] testng.configDirectory = /config
   [testng] [2024-06-21 02:47:59,137] [main] testng.multiplier = 1.0
   [testng] [2024-06-21 02:47:59,137] [main] testng.in-memory = false
   [testng] [2024-06-21 02:47:59,137] [main] testng.allow-missing = false
   [testng] [2024-06-21 02:47:59,137] [main] user.language = en
   [testng] [2024-06-21 02:47:59,137] [main] user.country = ${user.country}
   [testng] [2024-06-21 02:47:59,137] [main] Maximum heap size = 13653 MB
   [testng] Scanning for files...
   [testng] [2024-06-21 02:48:23,742] [main] ----------------------------------------
   [testng] [2024-06-21 02:48:23,742] [main] Total files: 256
   [testng] [2024-06-21 02:48:23,742] [main] Scan time: 24.604 s (96 ms/file)
   [testng] [2024-06-21 02:48:23,742] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 13 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-06-21 02:48:55,905] [pool-1-thread-1] Initializing /data/colin/08-10-09/08-10-09_d.mtb: 
   [testng] 02:48:55,905 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 02:48:55,906 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:48:55,907 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-21_02-48-55.log]
   [testng] 02:48:55,907 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5d3bf75d - End of configuration.
   [testng] [2024-06-21 02:49:00,212] [pool-1-thread-12] Initializing /data/viktorie/Structure.jpg: 
   [testng] 02:49:00,213 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 02:49:00,213 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:49:00,213 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-06-21_02-49-00.log]
   [testng] 02:49:00,214 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5608b281 - End of configuration.
   [testng] [2024-06-21 02:49:00,244] [pool-1-thread-11] Initializing /data/qa-17107/MaterialsDemo/MaterialsDemo_d.mtb: 
   [testng] 02:49:00,245 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 02:49:00,245 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:49:00,245 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-21_02-49-00.log]
   [testng] 02:49:00,246 |-INFO in ch.qos.logback.core.sift.SiftProcessor@26753d99 - End of configuration.
   [testng] [2024-06-21 02:49:00,285] [pool-1-thread-10] Initializing /data/qa-17107/LifeScienceDemo/LifeScienceDemoSTAR_d.mtb: 
   [testng] 02:49:00,285 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 02:49:00,285 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:49:00,286 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-21_02-49-00.log]
   [testng] 02:49:00,286 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2f69ffab - End of configuration.
   [testng] [2024-06-21 02:49:00,306] [pool-1-thread-9] Initializing /data/qa-17107/example2/example2_d.mtb: 
   [testng] 02:49:00,307 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 02:49:00,307 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:49:00,308 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-21_02-49-00.log]
   [testng] 02:49:00,308 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3c478559 - End of configuration.
   [testng] [2024-06-21 02:49:00,351] [pool-1-thread-8] Initializing /data/viktorie/090902/090902_d.mtb: 
   [testng] 02:49:00,352 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 02:49:00,352 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:49:00,352 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-21_02-49-00.log]
   [testng] 02:49:00,353 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6f9292f8 - End of configuration.
   [testng] [2024-06-21 02:49:00,384] [pool-1-thread-7] Initializing /data/qa-6659/12-07-05/12-07-05_d.mtb: 
   [testng] 02:49:00,384 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 02:49:00,384 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:49:00,385 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-21_02-49-00.log]
   [testng] 02:49:00,386 |-INFO in ch.qos.logback.core.sift.SiftProcessor@30acc693 - End of configuration.
   [testng] [2024-06-21 02:49:01,744] [pool-1-thread-6] Initializing /data/viktorie/2Channels.tif: 
   [testng] 02:49:01,744 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 02:49:01,744 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:49:01,745 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-21_02-49-01.log]
   [testng] 02:49:01,745 |-INFO in ch.qos.logback.core.sift.SiftProcessor@349f6388 - End of configuration.
   [testng] [2024-06-21 02:49:01,791] [pool-1-thread-5] Initializing /data/viktorie/test/test_d.mtb: 
   [testng] 02:49:01,791 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 02:49:01,791 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:49:01,792 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-21_02-49-01.log]
   [testng] 02:49:01,792 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3a984faa - End of configuration.
   [testng] [2024-06-21 02:49:01,834] [pool-1-thread-4] Initializing /data/colin/07-06-21/07-06-21_d.mtb: 
   [testng] 02:49:01,834 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 02:49:01,835 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:49:01,835 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-21_02-49-01.log]
   [testng] 02:49:01,835 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3538b535 - End of configuration.
   [testng] [2024-06-21 02:49:01,955] [pool-1-thread-3] Initializing /data/clare/set_27_on_d.mtb: 
   [testng] 02:49:01,955 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 02:49:01,955 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:49:01,955 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-21_02-49-01.log]
   [testng] 02:49:01,956 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4f5e98f9 - End of configuration.
   [testng] [2024-06-21 02:49:02,477] [pool-1-thread-2] Initializing /data/kees/Mariaelena_d.mtb: 
   [testng] 02:49:02,477 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 02:49:02,477 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:49:02,478 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-21_02-49-02.log]
   [testng] 02:49:02,478 |-INFO in ch.qos.logback.core.sift.SiftProcessor@17137f77 - End of configuration.
   [testng] [2024-06-21 02:49:04,753] [pool-1-thread-12] Initializing /data/qa-17107/plain/Plain_d.mtb: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 689, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 1 minute 46 seconds
Finished: SUCCESS