Started by upstream project "BIOFORMATS-test-repo" build number 102
originally caused by:
 Started by upstream project "Trigger" build number 113
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5
[BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins5283619057160291860.sh
+ '[' obf = slidebook ']'
++ date +%u
+ '[' 1 -le 1 ']'
+ DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR'
+ sudo docker run --rm --name BIOFORMATS-test-folder_15869_merge_ci -v /uod/idr/repos/curated/obf:/data -v /uod/idr-scratch/merge-ci/curated/obf:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test

test-automated:
   [testng] File leak detector installed
   [testng] 02:48:39,409 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 02:48:39,411 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service.
   [testng] 02:48:39,411 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 02:48:39,412 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 02:48:39,412 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 02:48:39,412 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 02:48:39,413 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 02:48:39,413 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 02:48:39,413 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 02:48:39,413 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 02:48:39,413 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 02:48:39,413 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 02:48:39,643 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 02:48:39,643 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 02:48:39,669 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 02:48:39,669 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 02:48:39,677 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 02:48:39,677 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 02:48:39,677 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 02:48:39,677 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 02:48:39,677 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration.
   [testng] 02:48:39,678 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point
   [testng] 02:48:39,678 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 265 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-06-24 02:48:39,688] [main] java.version = 1.8.0_342
   [testng] 02:48:39,691 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 02:48:39,691 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:48:39,735 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-24_02-48-39.log]
   [testng] 02:48:39,736 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
   [testng] [2024-06-24 02:48:39,738] [main] testng.directory = /data
   [testng] [2024-06-24 02:48:39,738] [main] testng.configDirectory = /config
   [testng] [2024-06-24 02:48:39,750] [main] testng.multiplier = 1.0
   [testng] [2024-06-24 02:48:39,750] [main] testng.in-memory = false
   [testng] [2024-06-24 02:48:39,750] [main] testng.allow-missing = false
   [testng] [2024-06-24 02:48:39,750] [main] user.language = fr
   [testng] [2024-06-24 02:48:39,750] [main] user.country = FR
   [testng] [2024-06-24 02:48:39,750] [main] Maximum heap size = 13653 MB
   [testng] Scanning for files...
   [testng] [2024-06-24 02:48:41,523] [main] ----------------------------------------
   [testng] [2024-06-24 02:48:41,523] [main] Total files: 12
   [testng] [2024-06-24 02:48:41,523] [main] Scan time: 1.773 s (147 ms/file)
   [testng] [2024-06-24 02:48:41,523] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 11 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-06-24 02:48:46,289] [pool-1-thread-1] Initializing /data/public/ngladitz/v4/test-v4.obf: 
   [testng] 02:48:46,290 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 02:48:46,290 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:48:46,291 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-24_02-48-46.log]
   [testng] 02:48:46,292 |-INFO in ch.qos.logback.core.sift.SiftProcessor@79f0f15c - End of configuration.
   [testng] [2024-06-24 02:48:46,487] [pool-1-thread-11] Initializing /data/qa-16895/Measurement1.msr: 
   [testng] 02:48:46,487 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 02:48:46,487 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:48:46,488 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-24_02-48-46.log]
   [testng] 02:48:46,488 |-INFO in ch.qos.logback.core.sift.SiftProcessor@24dd7cd9 - End of configuration.
   [testng] [2024-06-24 02:48:46,550] [pool-1-thread-10] Initializing /data/public/ngladitz/v4/test-v4-uncompressed.obf: 
   [testng] 02:48:46,551 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 02:48:46,551 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:48:46,551 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-24_02-48-46.log]
   [testng] 02:48:46,552 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71293cd6 - End of configuration.
   [testng] [2024-06-24 02:48:46,754] [pool-1-thread-9] Initializing /data/tristan/Example_Chrimson_Beads_40nm.msr: 
   [testng] 02:48:46,754 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 02:48:46,754 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:48:46,755 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-24_02-48-46.log]
   [testng] 02:48:46,755 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4570a430 - End of configuration.
   [testng] [2024-06-24 02:48:46,797] [pool-1-thread-8] Initializing /data/zoltan/3D-CONFOCAL-PSF-235nm.msr: 
   [testng] 02:48:46,797 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 02:48:46,797 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:48:46,798 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-24_02-48-46.log]
   [testng] 02:48:46,798 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6b481263 - End of configuration.
   [testng] [2024-06-24 02:48:46,857] [pool-1-thread-7] Initializing /data/qa-17111/before 1.msr: 
   [testng] 02:48:46,857 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 02:48:46,857 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:48:46,858 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-24_02-48-46.log]
   [testng] 02:48:46,858 |-INFO in ch.qos.logback.core.sift.SiftProcessor@752ebb14 - End of configuration.
   [testng] [2024-06-24 02:48:47,809] [pool-1-thread-6] Initializing /data/public/ngladitz/v6/test-v6-short-write.obf: 
   [testng] 02:48:47,809 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 02:48:47,809 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:48:47,810 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-24_02-48-47.log]
   [testng] 02:48:47,810 |-INFO in ch.qos.logback.core.sift.SiftProcessor@73449eed - End of configuration.
   [testng] [2024-06-24 02:48:47,889] [pool-1-thread-5] Initializing /data/bjoernthiel/20191106__zstack.msr: 
   [testng] 02:48:47,889 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 02:48:47,889 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:48:47,889 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-24_02-48-47.log]
   [testng] 02:48:47,890 |-INFO in ch.qos.logback.core.sift.SiftProcessor@240f8861 - End of configuration.
   [testng] [2024-06-24 02:48:48,012] [pool-1-thread-4] Initializing /data/public/ngladitz/v6/test-v6-uncompressed.obf: 
   [testng] 02:48:48,012 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 02:48:48,012 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:48:48,012 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-24_02-48-48.log]
   [testng] 02:48:48,013 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5dcfaaa8 - End of configuration.
   [testng] [2024-06-24 02:48:48,559] [pool-1-thread-3] Initializing /data/qa-27923/test.obf: 
   [testng] 02:48:48,559 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 02:48:48,559 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:48:48,560 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-24_02-48-48.log]
   [testng] 02:48:48,560 |-INFO in ch.qos.logback.core.sift.SiftProcessor@77364389 - End of configuration.
   [testng] [2024-06-24 02:48:48,606] [pool-1-thread-2] Initializing /data/public/ngladitz/v6/test-v6.obf: 
   [testng] 02:48:48,606 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 02:48:48,606 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:48:48,607 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-24_02-48-48.log]
   [testng] 02:48:48,608 |-INFO in ch.qos.logback.core.sift.SiftProcessor@ece6003 - End of configuration.
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 583, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 38 seconds
Finished: SUCCESS