Started by upstream project "BIOFORMATS-test-repo" build number 105
originally caused by:
Started by upstream project "Trigger" build number 117
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8
[BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins5943089020166434332.sh
+ '[' lim = slidebook ']'
++ date +%u
+ '[' 5 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_16224_merge_ci -v /uod/idr/repos/curated/lim:/data -v /uod/idr-scratch/merge-ci/curated/lim:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 01:28:23,265 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 01:28:23,268 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service.
[testng] 01:28:23,268 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:28:23,270 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:28:23,270 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 01:28:23,270 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 01:28:23,271 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 01:28:23,271 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:28:23,272 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:28:23,272 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 01:28:23,273 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 01:28:23,273 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 01:28:23,545 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 01:28:23,545 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 01:28:23,585 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 01:28:23,585 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 01:28:23,597 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 01:28:23,598 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 01:28:23,598 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 01:28:23,598 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 01:28:23,598 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration.
[testng] 01:28:23,599 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point
[testng] 01:28:23,599 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 327 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-06-28 01:28:23,613] [main] java.version = 1.8.0_342
[testng] 01:28:23,618 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 01:28:23,618 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:23,683 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-28_01-28-23.log]
[testng] 01:28:23,687 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
[testng] [2024-06-28 01:28:23,690] [main] testng.directory = /data
[testng] [2024-06-28 01:28:23,690] [main] testng.configDirectory = /config
[testng] [2024-06-28 01:28:23,708] [main] testng.multiplier = 1.0
[testng] [2024-06-28 01:28:23,708] [main] testng.in-memory = false
[testng] [2024-06-28 01:28:23,708] [main] testng.allow-missing = false
[testng] [2024-06-28 01:28:23,709] [main] user.language = en
[testng] [2024-06-28 01:28:23,709] [main] user.country = ${user.country}
[testng] [2024-06-28 01:28:23,709] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2024-06-28 01:28:24,235] [main] ----------------------------------------
[testng] [2024-06-28 01:28:24,235] [main] Total files: 21
[testng] [2024-06-28 01:28:24,235] [main] Scan time: 0.526 s (25 ms/file)
[testng] [2024-06-28 01:28:24,235] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 20 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-06-28 01:28:25,754] [pool-1-thread-1] Initializing /data/venu/Kontrolle0015.lim:
[testng] 01:28:25,754 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 01:28:25,754 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:25,755 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-28_01-28-25.log]
[testng] 01:28:25,756 |-INFO in ch.qos.logback.core.sift.SiftProcessor@400e2838 - End of configuration.
[testng] [2024-06-28 01:28:25,830] [pool-1-thread-12] Initializing /data/venu/Kontrolle0020.lim:
[testng] 01:28:25,830 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 01:28:25,830 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:25,831 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-06-28_01-28-25.log]
[testng] 01:28:25,832 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3da3face - End of configuration.
[testng] [2024-06-28 01:28:25,875] [pool-1-thread-11] Initializing /data/venu/Kontrolle0019.lim:
[testng] 01:28:25,876 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 01:28:25,876 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:25,877 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-28_01-28-25.log]
[testng] 01:28:25,877 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5b4f85e3 - End of configuration.
[testng] [2024-06-28 01:28:25,924] [pool-1-thread-10] Initializing /data/venu/Kontrolle0017.lim:
[testng] 01:28:25,924 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 01:28:25,925 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:25,926 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-28_01-28-25.log]
[testng] 01:28:25,926 |-INFO in ch.qos.logback.core.sift.SiftProcessor@45e71e9b - End of configuration.
[testng] [2024-06-28 01:28:25,956] [pool-1-thread-9] Initializing /data/venu/Kontrolle0016.lim:
[testng] 01:28:25,957 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 01:28:25,957 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:25,958 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-28_01-28-25.log]
[testng] 01:28:25,958 |-INFO in ch.qos.logback.core.sift.SiftProcessor@459a7a1f - End of configuration.
[testng] [2024-06-28 01:28:25,980] [pool-1-thread-8] Initializing /data/venu/Kontrolle0008.lim:
[testng] 01:28:25,981 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 01:28:25,981 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:25,982 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-28_01-28-25.log]
[testng] 01:28:25,982 |-INFO in ch.qos.logback.core.sift.SiftProcessor@252c5f49 - End of configuration.
[testng] [2024-06-28 01:28:26,003] [pool-1-thread-7] Initializing /data/venu/Kontrolle0001.lim:
[testng] 01:28:26,003 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 01:28:26,003 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:26,004 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-28_01-28-26.log]
[testng] 01:28:26,005 |-INFO in ch.qos.logback.core.sift.SiftProcessor@45a3324b - End of configuration.
[testng] [2024-06-28 01:28:26,028] [pool-1-thread-6] Initializing /data/venu/Kontrolle0003.lim:
[testng] 01:28:26,029 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 01:28:26,029 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:26,029 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-28_01-28-26.log]
[testng] 01:28:26,030 |-INFO in ch.qos.logback.core.sift.SiftProcessor@41a1f0d1 - End of configuration.
[testng] [2024-06-28 01:28:26,047] [pool-1-thread-5] Initializing /data/venu/Kontrolle0012.lim:
[testng] 01:28:26,047 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 01:28:26,047 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:26,048 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-28_01-28-26.log]
[testng] 01:28:26,048 |-INFO in ch.qos.logback.core.sift.SiftProcessor@76b4d23c - End of configuration.
[testng] [2024-06-28 01:28:26,068] [pool-1-thread-4] Initializing /data/venu/Kontrolle0009.lim:
[testng] 01:28:26,068 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 01:28:26,068 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:26,069 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-28_01-28-26.log]
[testng] 01:28:26,069 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3559699d - End of configuration.
[testng] [2024-06-28 01:28:26,084] [pool-1-thread-3] Initializing /data/venu/Kontrolle0013.lim:
[testng] 01:28:26,084 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 01:28:26,084 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:26,085 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-28_01-28-26.log]
[testng] 01:28:26,085 |-INFO in ch.qos.logback.core.sift.SiftProcessor@78dd0626 - End of configuration.
[testng] [2024-06-28 01:28:26,099] [pool-1-thread-2] Initializing /data/venu/Kontrolle0005.lim:
[testng] 01:28:26,100 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 01:28:26,100 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:28:26,101 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-28_01-28-26.log]
[testng] 01:28:26,101 |-INFO in ch.qos.logback.core.sift.SiftProcessor@b4c15c9 - End of configuration.
[testng] [2024-06-28 01:28:29,229] [pool-1-thread-3] Initializing /data/venu/Kontrolle0018.lim:
[testng] [2024-06-28 01:28:29,248] [pool-1-thread-2] Initializing /data/venu/Kontrolle0002.lim:
[testng] [2024-06-28 01:28:29,278] [pool-1-thread-11] Initializing /data/venu/Kontrolle0010.lim:
[testng] [2024-06-28 01:28:29,294] [pool-1-thread-5] Initializing /data/venu/Kontrolle0004.lim:
[testng] [2024-06-28 01:28:29,314] [pool-1-thread-12] Initializing /data/venu/Kontrolle0014.lim:
[testng] [2024-06-28 01:28:29,343] [pool-1-thread-4] Initializing /data/venu/Kontrolle0011.lim:
[testng] [2024-06-28 01:28:29,364] [pool-1-thread-1] Initializing /data/venu/Kontrolle0007.lim:
[testng] [2024-06-28 01:28:29,381] [pool-1-thread-6] Initializing /data/venu/Kontrolle0021.lim:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 1060, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 10 seconds
Finished: SUCCESS