Started by upstream project "BIOFORMATS-test-repo" build number 105
originally caused by:
Started by upstream project "Trigger" build number 117
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5
[BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins17399011536359808374.sh
+ '[' apng = slidebook ']'
++ date +%u
+ '[' 5 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_16336_merge_ci -v /uod/idr/repos/curated/apng:/data -v /uod/idr-scratch/merge-ci/curated/apng:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 02:32:57,089 |-INFO in ch.qos.logback.classic.util.ContextInitializer@6b4a4e18 - No custom configurators were discovered as a service.
[testng] 02:32:57,089 |-INFO in ch.qos.logback.classic.util.ContextInitializer@6b4a4e18 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 02:32:57,092 |-INFO in ch.qos.logback.classic.util.ContextInitializer@6b4a4e18 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 02:32:57,092 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 02:32:57,092 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 02:32:57,093 |-INFO in ch.qos.logback.classic.util.ContextInitializer@6b4a4e18 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 02:32:57,093 |-INFO in ch.qos.logback.classic.util.ContextInitializer@6b4a4e18 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 02:32:57,094 |-INFO in ch.qos.logback.classic.util.ContextInitializer@6b4a4e18 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 02:32:57,095 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 02:32:57,095 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 02:32:57,095 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 02:32:57,428 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 02:32:57,428 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 02:32:57,458 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 02:32:57,459 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 02:32:57,468 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 02:32:57,468 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 02:32:57,469 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 02:32:57,469 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 02:32:57,469 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration.
[testng] 02:32:57,470 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point
[testng] 02:32:57,470 |-INFO in ch.qos.logback.classic.util.ContextInitializer@6b4a4e18 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 376 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-06-28 02:32:57,482] [main] java.version = 1.8.0_342
[testng] 02:32:57,487 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 02:32:57,487 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:32:57,539 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-28_02-32-57.log]
[testng] 02:32:57,541 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
[testng] [2024-06-28 02:32:57,547] [main] testng.directory = /data
[testng] [2024-06-28 02:32:57,549] [main] testng.configDirectory = /config
[testng] [2024-06-28 02:32:57,593] [main] testng.multiplier = 1.0
[testng] [2024-06-28 02:32:57,593] [main] testng.in-memory = false
[testng] [2024-06-28 02:32:57,593] [main] testng.allow-missing = false
[testng] [2024-06-28 02:32:57,593] [main] user.language = en
[testng] [2024-06-28 02:32:57,593] [main] user.country = ${user.country}
[testng] [2024-06-28 02:32:57,593] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2024-06-28 02:32:58,223] [main] ----------------------------------------
[testng] [2024-06-28 02:32:58,223] [main] Total files: 21
[testng] [2024-06-28 02:32:58,223] [main] Scan time: 0.63 s (30 ms/file)
[testng] [2024-06-28 02:32:58,223] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 21 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-06-28 02:33:00,001] [pool-1-thread-1] Initializing /data/samples/Sun.png:
[testng] 02:33:00,001 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 02:33:00,001 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:33:00,002 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-28_02-33-00.log]
[testng] 02:33:00,003 |-INFO in ch.qos.logback.core.sift.SiftProcessor@58bd69ca - End of configuration.
[testng] [2024-06-28 02:33:00,059] [pool-1-thread-12] Initializing /data/samples/atom.png:
[testng] 02:33:00,059 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 02:33:00,059 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:33:00,060 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-06-28_02-33-00.log]
[testng] 02:33:00,060 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3402450a - End of configuration.
[testng] [2024-06-28 02:33:00,065] [pool-1-thread-11] Initializing /data/samples/orbit.png:
[testng] 02:33:00,065 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 02:33:00,066 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:33:00,066 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-28_02-33-00.log]
[testng] 02:33:00,067 |-INFO in ch.qos.logback.core.sift.SiftProcessor@35b46fc1 - End of configuration.
[testng] [2024-06-28 02:33:00,076] [pool-1-thread-10] Initializing /data/samples/monkey_apng.png:
[testng] 02:33:00,077 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 02:33:00,077 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:33:00,078 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-28_02-33-00.log]
[testng] 02:33:00,078 |-INFO in ch.qos.logback.core.sift.SiftProcessor@34582ed - End of configuration.
[testng] [2024-06-28 02:33:00,088] [pool-1-thread-9] Initializing /data/qa-7473/x.png:
[testng] 02:33:00,088 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 02:33:00,088 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:33:00,089 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-28_02-33-00.log]
[testng] 02:33:00,090 |-INFO in ch.qos.logback.core.sift.SiftProcessor@59838a9a - End of configuration.
[testng] [2024-06-28 02:33:00,102] [pool-1-thread-8] Initializing /data/samples/william_wong04.png:
[testng] 02:33:00,103 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 02:33:00,103 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:33:00,104 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-28_02-33-00.log]
[testng] 02:33:00,105 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4a949c53 - End of configuration.
[testng] [2024-06-28 02:33:00,114] [pool-1-thread-7] Initializing /data/samples/daniel_coltri_two.png:
[testng] 02:33:00,114 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 02:33:00,114 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:33:00,115 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-28_02-33-00.log]
[testng] 02:33:00,116 |-INFO in ch.qos.logback.core.sift.SiftProcessor@482bf30f - End of configuration.
[testng] [2024-06-28 02:33:00,122] [pool-1-thread-6] Initializing /data/qa-7473/n.tif:
[testng] 02:33:00,123 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 02:33:00,123 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:33:00,124 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-28_02-33-00.log]
[testng] 02:33:00,124 |-INFO in ch.qos.logback.core.sift.SiftProcessor@ff7bee9 - End of configuration.
[testng] [2024-06-28 02:33:00,176] [pool-1-thread-5] Initializing /data/samples/MoonPhases.png:
[testng] 02:33:00,176 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 02:33:00,176 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:33:00,177 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-28_02-33-00.log]
[testng] 02:33:00,178 |-INFO in ch.qos.logback.core.sift.SiftProcessor@82e879f - End of configuration.
[testng] [2024-06-28 02:33:00,183] [pool-1-thread-4] Initializing /data/samples/joanna_viera01.png:
[testng] 02:33:00,184 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 02:33:00,184 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:33:00,184 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-28_02-33-00.log]
[testng] 02:33:00,185 |-INFO in ch.qos.logback.core.sift.SiftProcessor@788fc68 - End of configuration.
[testng] [2024-06-28 02:33:00,190] [pool-1-thread-3] Initializing /data/samples/Matrix.png:
[testng] 02:33:00,191 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 02:33:00,191 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:33:00,192 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-28_02-33-00.log]
[testng] 02:33:00,192 |-INFO in ch.qos.logback.core.sift.SiftProcessor@a603d2f - End of configuration.
[testng] [2024-06-28 02:33:00,198] [pool-1-thread-2] Initializing /data/samples/phug_logo.png:
[testng] 02:33:00,198 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 02:33:00,198 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:33:00,200 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-28_02-33-00.log]
[testng] 02:33:00,201 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6a2c15d1 - End of configuration.
[testng] [2024-06-28 02:33:02,054] [pool-1-thread-9] Initializing /data/samples/william_wong02.png:
[testng] [2024-06-28 02:33:02,087] [pool-1-thread-12] Initializing /data/samples/spinfox.png:
[testng] [2024-06-28 02:33:02,093] [pool-1-thread-3] Initializing /data/samples/william_wong01.png:
[testng] [2024-06-28 02:33:02,126] [pool-1-thread-11] Initializing /data/samples/william_wong05.png:
[testng] [2024-06-28 02:33:02,148] [pool-1-thread-1] Initializing /data/colin/test.sfstdge.png:
[testng] [2024-06-28 02:33:02,150] [pool-1-thread-2] Initializing /data/samples/daniel_coltri_one.png:
[testng] [2024-06-28 02:33:02,157] [pool-1-thread-5] Initializing /data/samples/PhugAnimation3.png:
[testng] [2024-06-28 02:33:02,168] [pool-1-thread-8] Initializing /data/samples/chompy2.png:
[testng] [2024-06-28 02:33:02,176] [pool-1-thread-10] Initializing /data/samples/StarV838.png:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 1113, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 9 seconds
Finished: SUCCESS