Started by upstream project "BIOFORMATS-test-repo" build number 106
originally caused by:
Started by upstream project "Trigger" build number 118
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6
[BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins1662139705319138326.sh
+ '[' olympus-oir = slidebook ']'
++ date +%u
+ '[' 6 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_16384_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] WARNING: An illegal reflective access operation has occurred
[testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket
[testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener
[testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
[testng] WARNING: All illegal access operations will be denied in a future release
[testng] File leak detector installed
[testng] 01:22:31,638 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 01:22:31,640 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - No custom configurators were discovered as a service.
[testng] 01:22:31,640 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:22:31,642 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:22:31,642 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 01:22:31,643 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 01:22:31,644 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 01:22:31,644 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:22:31,644 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:22:31,645 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 01:22:31,646 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 01:22:31,646 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 01:22:31,890 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 01:22:31,890 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 01:22:31,919 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 01:22:31,919 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 01:22:31,926 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 01:22:31,927 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 01:22:31,927 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 01:22:31,927 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 01:22:31,927 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2794eab6 - End of configuration.
[testng] 01:22:31,928 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6c1a5b54 - Registering current configuration as safe fallback point
[testng] 01:22:31,929 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 284 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-06-29 01:22:31,940] [main] java.version = 11.0.16
[testng] 01:22:31,944 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 01:22:31,944 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:22:31,990 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-29_01-22-31.log]
[testng] 01:22:31,992 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642a7222 - End of configuration.
[testng] [2024-06-29 01:22:31,994] [main] testng.directory = /data
[testng] [2024-06-29 01:22:31,994] [main] testng.configDirectory = /config
[testng] [2024-06-29 01:22:32,005] [main] testng.multiplier = 1.0
[testng] [2024-06-29 01:22:32,007] [main] testng.in-memory = false
[testng] [2024-06-29 01:22:32,007] [main] testng.allow-missing = false
[testng] [2024-06-29 01:22:32,007] [main] user.language = en
[testng] [2024-06-29 01:22:32,007] [main] user.country = ${user.country}
[testng] [2024-06-29 01:22:32,007] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-06-29 01:22:45,075] [main] ----------------------------------------
[testng] [2024-06-29 01:22:45,075] [main] Total files: 283
[testng] [2024-06-29 01:22:45,075] [main] Scan time: 13.068 s (46 ms/file)
[testng] [2024-06-29 01:22:45,075] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 186 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-06-29 01:31:28,145] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir:
[testng] 01:31:28,146 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 01:31:28,146 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:31:28,149 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-29_01-31-28.log]
[testng] 01:31:28,150 |-INFO in ch.qos.logback.core.sift.SiftProcessor@536dfdd6 - End of configuration.
[testng] [2024-06-29 01:31:28,704] [pool-1-thread-12] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.ome.tif:
[testng] 01:31:28,704 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 01:31:28,704 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:31:28,705 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-06-29_01-31-28.log]
[testng] 01:31:28,705 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7c21db68 - End of configuration.
[testng] [2024-06-29 01:31:28,814] [pool-1-thread-11] Initializing /data/qa-16881/P10-50 D2_0019.oir:
[testng] 01:31:28,815 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 01:31:28,815 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:31:28,816 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-29_01-31-28.log]
[testng] 01:31:28,816 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4d91763d - End of configuration.
[testng] [2024-06-29 01:31:29,100] [pool-1-thread-10] Initializing /data/qa-16881/P10D1 20150729.ome.tif:
[testng] 01:31:29,100 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 01:31:29,100 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:31:29,101 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-29_01-31-29.log]
[testng] 01:31:29,101 |-INFO in ch.qos.logback.core.sift.SiftProcessor@640211f2 - End of configuration.
[testng] [2024-06-29 01:31:29,215] [pool-1-thread-9] Initializing /data/olympus/_stitched 4x4 zstack 10X_XYZ_/stack1/frame_t_0.ets:
[testng] 01:31:29,215 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 01:31:29,215 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:31:29,216 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-29_01-31-29.log]
[testng] 01:31:29,216 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4bcf3940 - End of configuration.
[testng] [2024-06-29 01:31:29,248] [pool-1-thread-8] Initializing /data/olympus/Clipboard-calcium sparks_XYt.tif:
[testng] 01:31:29,249 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 01:31:29,249 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:31:29,250 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-29_01-31-29.log]
[testng] 01:31:29,250 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6d808be - End of configuration.
[testng] [2024-06-29 01:31:29,312] [pool-1-thread-7] Initializing /data/qa-16881/W11-180 D3 20151021_0024.oir:
[testng] 01:31:29,313 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 01:31:29,313 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:31:29,314 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-29_01-31-29.log]
[testng] 01:31:29,314 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1a86e488 - End of configuration.
[testng] [2024-06-29 01:31:29,552] [pool-1-thread-6] Initializing /data/qa-17270/alexa488.ome.tif:
[testng] 01:31:29,553 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 01:31:29,553 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:31:29,554 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-29_01-31-29.log]
[testng] 01:31:29,554 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7e240f4f - End of configuration.
[testng] [2024-06-29 01:31:29,652] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif:
[testng] 01:31:29,652 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 01:31:29,652 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:31:29,653 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-29_01-31-29.log]
[testng] 01:31:29,653 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2ee7b72e - End of configuration.
[testng] [2024-06-29 01:31:29,751] [pool-1-thread-4] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info:
[testng] 01:31:29,752 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 01:31:29,752 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:31:29,753 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-29_01-31-29.log]
[testng] 01:31:29,753 |-INFO in ch.qos.logback.core.sift.SiftProcessor@f8a175d - End of configuration.
[testng] [2024-06-29 01:31:33,612] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir:
[testng] 01:31:33,613 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 01:31:33,613 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:31:33,614 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-29_01-31-33.log]
[testng] 01:31:33,614 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4ae839c5 - End of configuration.
[testng] [2024-06-29 01:31:33,753] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif:
[testng] 01:31:33,754 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 01:31:33,754 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:31:33,756 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-29_01-31-33.log]
[testng] 01:31:33,757 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6d04fbc5 - End of configuration.
[testng] [2024-06-29 01:31:38,104] [pool-1-thread-5] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif:
[testng] [2024-06-29 01:31:38,164] [pool-1-thread-10] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir:
[testng] [2024-06-29 01:31:38,332] [pool-1-thread-12] Initializing /data/public/etienne/venus stack.ome.tif:
[testng] [2024-06-29 01:31:38,471] [pool-1-thread-2] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0024.tif:
[testng] [2024-06-29 01:31:38,530] [pool-1-thread-8] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir:
[testng] [2024-06-29 01:31:39,161] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-Caged Glu-3 point.tif:
[testng] [2024-06-29 01:31:39,271] [pool-1-thread-11] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir:
[testng] [2024-06-29 01:31:39,390] [pool-1-thread-6] Initializing /data/olympus/2017-04-20/mito_0006_0001.oir:
[testng] [2024-06-29 01:31:39,598] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif:
[testng] [2024-06-29 01:31:40,190] [pool-1-thread-9] Initializing /data/public/etienne/amy slice z stack_0001.oir:
[testng] [2024-06-29 01:31:41,989] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir:
[testng] [2024-06-29 01:31:42,239] [pool-1-thread-1] Initializing /data/olympus/calcium sparks_XYt.ome.tif:
[testng] [2024-06-29 01:31:42,547] [pool-1-thread-10] Initializing /data/qa-17919/f10187.oir:
[testng] [2024-06-29 01:32:04,394] [pool-1-thread-12] Initializing /data/public/etienne/venus stack.oir:
[testng] [2024-06-29 01:32:05,135] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif:
[testng] [2024-06-29 01:32:05,193] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif:
[testng] [2024-06-29 01:32:05,272] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Clipboard-Image_0033_0001.tif:
[testng] [2024-06-29 01:32:05,341] [pool-1-thread-3] Initializing /data/qa-17331/60x zstack RS.oir:
[testng] [2024-06-29 01:32:05,691] [pool-1-thread-9] Initializing /data/qa-17331/60x zstack RS.ome.tif:
[testng] [2024-06-29 01:32:06,667] [pool-1-thread-8] Initializing /data/olympus/XYZt.vsi:
[testng] [2024-06-29 01:32:07,430] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi:
[testng] [2024-06-29 01:32:07,687] [pool-1-thread-1] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi:
[testng] [2024-06-29 01:32:07,703] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.oir:
[testng] [2024-06-29 01:32:08,034] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif:
[testng] [2024-06-29 01:32:08,209] [pool-1-thread-8] Initializing /data/qa-17270/stack1.oir:
[testng] [2024-06-29 01:32:09,621] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif:
[testng] [2024-06-29 01:32:09,680] [pool-1-thread-12] Initializing /data/cudmore/20190401__0005.oir:
[testng] [2024-06-29 01:32:13,856] [pool-1-thread-9] Initializing /data/qa-16881/P10D1 20150729.oir:
[testng] [2024-06-29 01:32:14,090] [pool-1-thread-5] Initializing /data/qa-16881/Clipboard-W4-0 D14 New 20150828_0007.tif:
[testng] [2024-06-29 01:32:14,362] [pool-1-thread-1] Initializing /data/qa-16881/W11-180 D3 20151021_0006.oir:
[testng] [2024-06-29 01:32:15,123] [pool-1-thread-3] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0001.tif:
[testng] [2024-06-29 01:32:15,215] [pool-1-thread-11] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir:
[testng] [2024-06-29 01:32:15,866] [pool-1-thread-7] Initializing /data/qa-17270/stack1.ome.tif:
[testng] [2024-06-29 01:32:16,186] [pool-1-thread-5] Initializing /data/qa-17331/Clipboard.tif:
[testng] [2024-06-29 01:32:16,256] [pool-1-thread-1] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif:
[testng] [2024-06-29 01:32:16,398] [pool-1-thread-9] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir:
[testng] [2024-06-29 01:32:17,033] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi:
[testng] [2024-06-29 01:32:17,222] [pool-1-thread-6] Initializing /data/qa-16881/W11-180 D3 20151021_0024.ome.tif:
[testng] [2024-06-29 01:32:17,403] [pool-1-thread-3] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif:
[testng] [2024-06-29 01:32:18,174] [pool-1-thread-1] Initializing /data/qa-16881/P10-50 D2.oir:
[testng] [2024-06-29 01:32:18,336] [pool-1-thread-11] Initializing /data/olympus/XYZt.ome.tif:
[testng] [2024-06-29 01:32:18,619] [pool-1-thread-5] Initializing /data/olympus/2021-04-20/overview 2 x_Cycle_01/matl.omp2info:
[testng] [2024-06-29 01:32:18,784] [pool-1-thread-7] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/matl.omp2info:
[testng] [2024-06-29 01:32:20,617] [pool-1-thread-6] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.ome.tif:
[testng] [2024-06-29 01:32:21,182] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.ome.tif:
[testng] [2024-06-29 01:32:21,658] [pool-1-thread-9] Initializing /data/olympus/XYZt.oir:
[testng] [2024-06-29 01:32:22,988] [pool-1-thread-2] Initializing /data/qa-17335/Clipboard-1.tif:
[testng] [2024-06-29 01:32:23,064] [pool-1-thread-1] Initializing /data/qa-16871/XY_0003.oir:
[testng] [2024-06-29 01:32:23,350] [pool-1-thread-6] Initializing /data/olympus/40X_4CH_XY.oir:
[testng] [2024-06-29 01:32:24,112] [pool-1-thread-1] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0019.tif:
[testng] [2024-06-29 01:32:24,223] [pool-1-thread-5] Initializing /data/qa-17270/alexa488.oir:
[testng] [2024-06-29 01:32:24,934] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.ome.tif:
[testng] [2024-06-29 01:32:25,243] [pool-1-thread-11] Initializing /data/qa-16881/Clipboard-P10-50 D2_0019.tif:
[testng] [2024-06-29 01:32:25,320] [pool-1-thread-2] Initializing /data/qa-16881/Clipboard-W1-135 D6 New 20150818_0010.tif:
[testng] [2024-06-29 01:32:25,733] [pool-1-thread-1] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.ome.tif:
[testng] [2024-06-29 01:32:26,123] [pool-1-thread-3] Initializing /data/qa-17270/image1.ome.tif:
[testng] [2024-06-29 01:32:26,247] [pool-1-thread-8] Initializing /data/olympus/_calcium sparks_XYt_/stack1/frame_t_0.ets:
[testng] [2024-06-29 01:32:26,330] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.oir:
[testng] [2024-06-29 01:32:26,515] [pool-1-thread-5] Initializing /data/qa-17335/1.ome.tif:
[testng] [2024-06-29 01:32:27,123] [pool-1-thread-2] Initializing /data/qa-16881/P10-50 D2.ome.tif:
[testng] [2024-06-29 01:32:27,247] [pool-1-thread-11] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif:
[testng] [2024-06-29 01:32:27,514] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/zebra shg.oir:
[testng] [2024-06-29 01:32:29,069] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.ome.tif:
[testng] [2024-06-29 01:32:29,283] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.oir:
[testng] [2024-06-29 01:32:29,416] [pool-1-thread-6] Initializing /data/qa-17335/OSR-Z.ome.tif:
[testng] [2024-06-29 01:32:29,721] [pool-1-thread-5] Initializing /data/qa-16881/P10D1 20150729_0024.ome.tif:
[testng] [2024-06-29 01:32:30,146] [pool-1-thread-1] Initializing /data/qa-16881/P10D1 20150729_0019.oir:
[testng] [2024-06-29 01:32:30,484] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.oir:
[testng] [2024-06-29 01:32:30,594] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif:
[testng] [2024-06-29 01:32:30,868] [pool-1-thread-3] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif:
[testng] [2024-06-29 01:32:31,224] [pool-1-thread-6] Initializing /data/qa-17270/Clipboard-stack1.tif:
[testng] [2024-06-29 01:32:31,678] [pool-1-thread-5] Initializing /data/qa-16881/Clipboard-W1-75 D11 New 20150825_0004.tif:
[testng] [2024-06-29 01:32:31,722] [pool-1-thread-2] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir:
[testng] [2024-06-29 01:32:32,023] [pool-1-thread-11] Initializing /data/olympus/Clipboard-40X_4CH_XY.tif:
[testng] [2024-06-29 01:32:32,415] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.oir:
[testng] [2024-06-29 01:32:33,331] [pool-1-thread-9] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif:
[testng] [2024-06-29 01:32:33,388] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir:
[testng] [2024-06-29 01:32:34,479] [pool-1-thread-6] Initializing /data/olympus/2017-11-20/xytz_golgi/xytz_golgi.oir:
[testng] [2024-06-29 01:32:35,517] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Clipboard-Image_0001_0001.tif:
[testng] [2024-06-29 01:32:35,825] [pool-1-thread-9] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir:
[testng] [2024-06-29 01:32:36,008] [pool-1-thread-11] Initializing /data/qa-17409/Stitch_A01_G001-exported.ome.tif:
[testng] [2024-06-29 01:32:36,975] [pool-1-thread-2] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir:
[testng] [2024-06-29 01:32:40,990] [pool-1-thread-5] Initializing /data/qa-16881/Clipboard-P10-50 D2_0006.tif:
[testng] [2024-06-29 01:32:41,144] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Clipboard-Image_0091_0001.tif:
[testng] [2024-06-29 01:32:41,224] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Clipboard-Image_0079_0001.tif:
[testng] [2024-06-29 01:32:41,460] [pool-1-thread-1] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.oir:
[testng] [2024-06-29 01:32:42,664] [pool-1-thread-5] Initializing /data/qa-16881/P10D1 20150729_0019.ome.tif:
[testng] [2024-06-29 01:32:43,042] [pool-1-thread-9] Initializing /data/qa-17270/image1.oir:
[testng] [2024-06-29 01:32:43,509] [pool-1-thread-3] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/image_Cycle_02.oir:
[testng] [2024-06-29 01:32:43,633] [pool-1-thread-1] Initializing /data/qa-16881/P10-50 D2_0019.ome.tif:
[testng] [2024-06-29 01:32:43,976] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-LILY POLLEN.tif:
[testng] [2024-06-29 01:32:44,480] [pool-1-thread-5] Initializing /data/olympus/calcium sparks_XYt.oir:
[testng] [2024-06-29 01:32:45,574] [pool-1-thread-1] Initializing /data/olympus/Stitched_XYZ.ome.tif:
[testng] [2024-06-29 01:32:45,823] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.oir:
[testng] [2024-06-29 01:32:46,017] [pool-1-thread-9] Initializing /data/public/etienne/Clipboard-venus stack.tif:
[testng] [2024-06-29 01:32:46,490] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0024.tif:
[testng] [2024-06-29 01:32:46,934] [pool-1-thread-11] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/matl.omp2info:
[testng] [2024-06-29 01:32:49,324] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.oir:
[testng] [2024-06-29 01:32:49,987] [pool-1-thread-9] Initializing /data/martin/20170824_JupGFP_HisRFP_wL3_30xSI_4xzoom_0p5z_A01_G001_0001.oir:
[testng] [2024-06-29 01:33:45,859] [pool-1-thread-8] Initializing /data/qa-17222/ps245 red tubulin green 60x-1.oir.vsi:
[testng] [2024-06-29 01:33:46,196] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Clipboard-Image_0050_0001.tif:
[testng] [2024-06-29 01:33:46,236] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.oir:
[testng] [2024-06-29 01:33:46,453] [pool-1-thread-3] Initializing /data/qa-17335/Clipboard-stimulation_0001_LSM.tif:
[testng] [2024-06-29 01:33:47,089] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-PA-GFPv-2.tif:
[testng] [2024-06-29 01:33:47,152] [pool-1-thread-5] Initializing /data/qa-17922/example_multipart.oir:
[testng] [2024-06-29 01:34:10,353] [pool-1-thread-12] Initializing /data/olympus/Stitched_XYZ.vsi:
[testng] [2024-06-29 01:34:10,407] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.ome.tif:
[testng] [2024-06-29 01:34:10,719] [pool-1-thread-3] Initializing /data/olympus/Clipboard-stitched 4x4 zstack 10X_XYZ.tif:
[testng] [2024-06-29 01:34:11,253] [pool-1-thread-8] Initializing /data/qa-16881/P10-50 D2_0006.ome.tif:
[testng] [2024-06-29 01:34:11,406] [pool-1-thread-1] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.ome.tif:
[testng] [2024-06-29 01:34:11,487] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.oir:
[testng] [2024-06-29 01:34:12,171] [pool-1-thread-12] Initializing /data/qa-16881/P10D1 20150729_0024.oir:
[testng] [2024-06-29 01:34:12,505] [pool-1-thread-3] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z_CONTROL.oir:
[testng] [2024-06-29 01:34:13,003] [pool-1-thread-6] Initializing /data/qa-17335/stimulation_0001_LSM.oir:
[testng] [2024-06-29 01:34:13,789] [pool-1-thread-8] Initializing /data/olympus/40X_4CH_XY.ome.tif:
[testng] [2024-06-29 01:34:14,509] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Clipboard-Image_0099_0001.tif:
[testng] [2024-06-29 01:34:14,948] [pool-1-thread-12] Initializing /data/qa-17917/f10010.oir:
[testng] [2024-06-29 01:34:41,348] [pool-1-thread-4] Initializing /data/qa-21508/Stitch_A01_G008.oir:
[testng] [2024-06-29 01:34:41,764] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.oir:
[testng] [2024-06-29 01:34:42,484] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif:
[testng] [2024-06-29 01:34:42,557] [pool-1-thread-3] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif:
[testng] [2024-06-29 01:34:42,997] [pool-1-thread-6] Initializing /data/olympus/calcium sparks.jpg:
[testng] [2024-06-29 01:34:43,928] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/Clipboard.tif:
[testng] [2024-06-29 01:34:43,987] [pool-1-thread-1] Initializing /data/olympus/Stitched_XYZ.oir:
[testng] [2024-06-29 01:34:45,028] [pool-1-thread-8] Initializing /data/public/etienne/coupe shg stack_0001.ome.tif:
[testng] [2024-06-29 01:34:45,721] [pool-1-thread-3] Initializing /data/qa-17293/2-z-t_0001_LSM.oir:
[testng] [2024-06-29 01:34:46,571] [pool-1-thread-8] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir:
[testng] [2024-06-29 01:34:47,075] [pool-1-thread-6] Initializing /data/qa-16871/Clipboard.tif:
[testng] [2024-06-29 01:34:47,315] [pool-1-thread-3] Initializing /data/qa-17409/Clipboard.tif:
[testng] [2024-06-29 01:34:47,925] [pool-1-thread-1] Initializing /data/qa-17409/Stitch_A01_G001.oir:
[testng] [2024-06-29 01:34:49,247] [pool-1-thread-2] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png:
[testng] [2024-06-29 01:34:49,494] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif:
[testng] [2024-06-29 01:34:49,600] [pool-1-thread-6] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir:
[testng] [2024-06-29 01:34:49,853] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif:
[testng] [2024-06-29 01:34:51,286] [pool-1-thread-8] Initializing /data/qa-16881/Clipboard-P10D1 20150729.tif:
[testng] [2024-06-29 01:34:51,655] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif:
[testng] [2024-06-29 01:34:51,735] [pool-1-thread-3] Initializing /data/qa-17335/OSR-Z.oir:
[testng] [2024-06-29 01:34:53,244] [pool-1-thread-3] Initializing /data/qa-17270/Clipboard-image1.tif:
[testng] [2024-06-29 01:34:53,555] [pool-1-thread-2] Initializing /data/qa-17293/Clipboard.tif:
[testng] [2024-06-29 01:34:53,639] [pool-1-thread-8] Initializing /data/qa-18802/20171020_JupGFPHisRFP_L3_30xSI_galvo_p5z_p1xy_better_than_nyquist.oir:
[testng] [2024-06-29 01:34:54,919] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir:
[testng] [2024-06-29 01:34:55,974] [pool-1-thread-7] Initializing /data/public/etienne/coupe shg stack_0001.oir:
[testng] [2024-06-29 01:34:56,275] [pool-1-thread-1] Initializing /data/qa-17335/1.oir:
[testng] [2024-06-29 01:34:56,628] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.oir:
[testng] [2024-06-29 01:34:56,921] [pool-1-thread-2] Initializing /data/qa-16881/P10-50 D2_0006.oir:
[testng] [2024-06-29 01:34:57,136] [pool-1-thread-6] Initializing /data/qa-17293/2-z-t_0001_LSM.ome.tif:
[testng] [2024-06-29 01:34:57,470] [pool-1-thread-1] Initializing /data/olympus/40X_4CH_XY.vsi:
[testng] [2024-06-29 01:34:58,391] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.ome.tif:
[testng] [2024-06-29 01:34:58,503] [pool-1-thread-7] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif:
[testng] [2024-06-29 01:34:58,842] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.oir:
[testng] [2024-06-29 01:34:59,891] [pool-1-thread-2] Initializing /data/olympus/Clipboard-XYZt.tif:
[testng] [2024-06-29 01:35:00,001] [pool-1-thread-6] Initializing /data/qa-16871/XY_0003.ome.tif:
[testng] [2024-06-29 01:35:00,123] [pool-1-thread-3] Initializing /data/qa-17270/Clipboard-alexa488.tif:
[testng] [2024-06-29 01:35:00,261] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif:
[testng] [2024-06-29 01:35:01,107] [pool-1-thread-6] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif:
[testng] [2024-06-29 01:35:01,400] [pool-1-thread-2] Initializing /data/qa-16881/Clipboard-P10-50 D2.tif:
[testng] [2024-06-29 01:35:01,623] [pool-1-thread-1] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir:
[testng] [2024-06-29 01:35:01,709] [pool-1-thread-3] Initializing /data/olympus/spectral_scan_XYL.ome.tif:
[testng] [2024-06-29 01:35:02,735] [pool-1-thread-6] Initializing /data/olympus/2017-04-20/Clipboard.tif:
[testng] [2024-06-29 01:35:03,054] [pool-1-thread-2] Initializing /data/olympus/2017-04-20/mito_0006_0001.ome.tif:
[testng] [2024-06-29 01:35:03,383] [pool-1-thread-3] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif:
[testng] [2024-06-29 01:35:03,656] [pool-1-thread-7] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir:
[testng] [2024-06-29 01:35:04,155] [pool-1-thread-6] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif:
[testng] [2024-06-29 01:35:04,264] [pool-1-thread-2] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif:
[testng] [2024-06-29 01:35:05,142] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif:
[testng] [2024-06-29 01:35:05,208] [pool-1-thread-3] Initializing /data/qa-17335/Clipboard-OSR-Z.tif:
[testng] [2024-06-29 01:35:05,663] [pool-1-thread-6] Initializing /data/public/etienne/amy slice z stack_0001.ome.tif:
[testng] [2024-06-29 01:35:05,900] [pool-1-thread-7] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir:
[testng] [2024-06-29 01:35:06,120] [pool-1-thread-2] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.ome.tif:
[testng] [2024-06-29 01:35:06,190] [pool-1-thread-8] Initializing /data/olympus/2017-11-20/fish_overview/fish-overview-night.oir:
[testng] [2024-06-29 01:35:10,996] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif:
[testng] [2024-06-29 01:35:11,703] [pool-1-thread-2] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif:
[testng] [2024-06-29 01:35:11,741] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif:
[testng] [2024-06-29 01:35:11,823] [pool-1-thread-6] Initializing /data/olympus/spectral_scan_XYL.oir:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 9858, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 56 minutes 43 seconds
Finished: SUCCESS