Started by upstream project "BIOFORMATS-test-repo" build number 107
originally caused by:
Started by upstream project "Trigger" build number 119
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8
[BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins15079625661577559640.sh
+ '[' olympus-oir = slidebook ']'
++ date +%u
+ '[' 7 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_16548_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
[testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
[testng] File leak detector installed
[testng] 01:22:51,084 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 01:22:51,085 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service.
[testng] 01:22:51,085 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:22:51,087 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:22:51,087 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 01:22:51,088 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 01:22:51,088 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 01:22:51,088 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:22:51,089 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:22:51,090 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 01:22:51,090 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 01:22:51,090 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 01:22:51,273 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 01:22:51,273 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 01:22:51,315 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 01:22:51,316 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 01:22:51,323 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 01:22:51,323 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 01:22:51,324 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 01:22:51,324 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 01:22:51,324 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration.
[testng] 01:22:51,325 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point
[testng] 01:22:51,325 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 236 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-06-30 01:22:51,338] [main] java.version = 17.0.2
[testng] 01:22:51,343 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 01:22:51,343 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:22:51,403 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-30_01-22-51.log]
[testng] 01:22:51,405 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration.
[testng] [2024-06-30 01:22:51,408] [main] testng.directory = /data
[testng] [2024-06-30 01:22:51,408] [main] testng.configDirectory = /config
[testng] [2024-06-30 01:22:51,422] [main] testng.multiplier = 1.0
[testng] [2024-06-30 01:22:51,423] [main] testng.in-memory = false
[testng] [2024-06-30 01:22:51,423] [main] testng.allow-missing = false
[testng] [2024-06-30 01:22:51,423] [main] user.language = en
[testng] [2024-06-30 01:22:51,423] [main] user.country = ${user.country}
[testng] [2024-06-30 01:22:51,423] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-06-30 01:23:09,034] [main] ----------------------------------------
[testng] [2024-06-30 01:23:09,034] [main] Total files: 283
[testng] [2024-06-30 01:23:09,034] [main] Scan time: 17.61 s (62 ms/file)
[testng] [2024-06-30 01:23:09,034] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 186 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-06-30 01:31:12,841] [pool-1-thread-1] Initializing /data/olympus/Clipboard-calcium sparks_XYt.tif:
[testng] 01:31:12,841 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 01:31:12,841 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:31:12,843 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-30_01-31-12.log]
[testng] 01:31:12,843 |-INFO in ch.qos.logback.core.sift.SiftProcessor@f8bc963 - End of configuration.
[testng] [2024-06-30 01:31:12,885] [pool-1-thread-12] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.ome.tif:
[testng] 01:31:12,885 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 01:31:12,885 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:31:12,887 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-06-30_01-31-12.log]
[testng] 01:31:12,887 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3eea36a3 - End of configuration.
[testng] [2024-06-30 01:31:12,992] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif:
[testng] 01:31:12,992 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 01:31:12,993 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:31:12,994 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-30_01-31-12.log]
[testng] 01:31:12,994 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4f807767 - End of configuration.
[testng] [2024-06-30 01:31:13,050] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.oir:
[testng] 01:31:13,050 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 01:31:13,050 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:31:13,051 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-30_01-31-13.log]
[testng] 01:31:13,051 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3cff0c00 - End of configuration.
[testng] [2024-06-30 01:31:13,168] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif:
[testng] 01:31:13,168 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 01:31:13,168 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:31:13,169 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-30_01-31-13.log]
[testng] 01:31:13,170 |-INFO in ch.qos.logback.core.sift.SiftProcessor@41f6325d - End of configuration.
[testng] [2024-06-30 01:31:13,241] [pool-1-thread-8] Initializing /data/qa-17270/image1.oir:
[testng] 01:31:13,241 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 01:31:13,241 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:31:13,242 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-30_01-31-13.log]
[testng] 01:31:13,243 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4b2cd835 - End of configuration.
[testng] [2024-06-30 01:31:13,305] [pool-1-thread-7] Initializing /data/qa-17919/f10187.oir:
[testng] 01:31:13,305 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 01:31:13,305 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:31:13,306 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-30_01-31-13.log]
[testng] 01:31:13,307 |-INFO in ch.qos.logback.core.sift.SiftProcessor@50ecfb31 - End of configuration.
[testng] [2024-06-30 01:31:28,679] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0019.tif:
[testng] 01:31:28,679 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 01:31:28,680 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:31:28,680 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-30_01-31-28.log]
[testng] 01:31:28,681 |-INFO in ch.qos.logback.core.sift.SiftProcessor@65ed48ef - End of configuration.
[testng] [2024-06-30 01:31:28,730] [pool-1-thread-5] Initializing /data/olympus/_stitched 4x4 zstack 10X_XYZ_/stack1/frame_t_0.ets:
[testng] 01:31:28,730 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 01:31:28,730 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:31:28,731 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-30_01-31-28.log]
[testng] 01:31:28,731 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6b72b5d7 - End of configuration.
[testng] [2024-06-30 01:31:28,759] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif:
[testng] 01:31:28,760 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 01:31:28,760 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:31:28,760 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-30_01-31-28.log]
[testng] 01:31:28,761 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6ca41f71 - End of configuration.
[testng] [2024-06-30 01:31:28,859] [pool-1-thread-3] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif:
[testng] 01:31:28,859 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 01:31:28,859 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:31:28,860 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-30_01-31-28.log]
[testng] 01:31:28,860 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1ae10945 - End of configuration.
[testng] [2024-06-30 01:31:28,899] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif:
[testng] 01:31:28,899 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 01:31:28,899 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:31:28,900 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-30_01-31-28.log]
[testng] 01:31:28,900 |-INFO in ch.qos.logback.core.sift.SiftProcessor@22c17a91 - End of configuration.
[testng] [2024-06-30 01:31:31,435] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir:
[testng] [2024-06-30 01:31:31,602] [pool-1-thread-3] Initializing /data/qa-16881/P10D1 20150729_0019.oir:
[testng] [2024-06-30 01:31:31,751] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir:
[testng] [2024-06-30 01:31:32,127] [pool-1-thread-8] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif:
[testng] [2024-06-30 01:31:32,208] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Clipboard-Image_0033_0001.tif:
[testng] [2024-06-30 01:31:32,248] [pool-1-thread-10] Initializing /data/olympus/40X_4CH_XY.vsi:
[testng] [2024-06-30 01:31:32,275] [pool-1-thread-9] Initializing /data/qa-17331/60x zstack RS.ome.tif:
[testng] [2024-06-30 01:31:32,353] [pool-1-thread-1] Initializing /data/qa-17270/Clipboard-alexa488.tif:
[testng] [2024-06-30 01:31:32,411] [pool-1-thread-12] Initializing /data/qa-17270/stack1.oir:
[testng] [2024-06-30 01:31:33,806] [pool-1-thread-4] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir:
[testng] [2024-06-30 01:31:34,228] [pool-1-thread-5] Initializing /data/olympus/XYZt.vsi:
[testng] [2024-06-30 01:31:35,258] [pool-1-thread-5] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif:
[testng] [2024-06-30 01:31:35,365] [pool-1-thread-1] Initializing /data/qa-16881/P10-50 D2_0006.ome.tif:
[testng] [2024-06-30 01:31:35,527] [pool-1-thread-8] Initializing /data/olympus/40X_4CH_XY.oir:
[testng] [2024-06-30 01:31:35,684] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.ome.tif:
[testng] [2024-06-30 01:31:35,771] [pool-1-thread-9] Initializing /data/qa-16881/P10D1 20150729.ome.tif:
[testng] [2024-06-30 01:31:35,910] [pool-1-thread-3] Initializing /data/martin/20170824_JupGFP_HisRFP_wL3_30xSI_4xzoom_0p5z_A01_G001_0001.oir:
[testng] [2024-06-30 01:32:24,245] [pool-1-thread-2] Initializing /data/public/etienne/Clipboard-venus stack.tif:
[testng] [2024-06-30 01:32:24,305] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Clipboard-Image_0099_0001.tif:
[testng] [2024-06-30 01:32:24,810] [pool-1-thread-11] Initializing /data/qa-16881/Clipboard-P10-50 D2_0006.tif:
[testng] [2024-06-30 01:32:24,979] [pool-1-thread-5] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir:
[testng] [2024-06-30 01:32:25,117] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif:
[testng] [2024-06-30 01:32:25,317] [pool-1-thread-9] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif:
[testng] [2024-06-30 01:32:25,547] [pool-1-thread-10] Initializing /data/qa-17335/Clipboard-stimulation_0001_LSM.tif:
[testng] [2024-06-30 01:32:25,594] [pool-1-thread-2] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-LILY POLLEN.tif:
[testng] [2024-06-30 01:32:25,928] [pool-1-thread-6] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png:
[testng] [2024-06-30 01:32:26,186] [pool-1-thread-8] Initializing /data/cudmore/20190401__0005.oir:
[testng] [2024-06-30 01:32:30,182] [pool-1-thread-6] Initializing /data/public/etienne/venus stack.oir:
[testng] [2024-06-30 01:32:30,537] [pool-1-thread-11] Initializing /data/qa-21508/Stitch_A01_G008.oir:
[testng] [2024-06-30 01:32:30,669] [pool-1-thread-1] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif:
[testng] [2024-06-30 01:32:30,898] [pool-1-thread-9] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.oir:
[testng] [2024-06-30 01:32:31,301] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/Clipboard.tif:
[testng] [2024-06-30 01:32:31,444] [pool-1-thread-2] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/image_Cycle_02.oir:
[testng] [2024-06-30 01:32:33,594] [pool-1-thread-10] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir:
[testng] [2024-06-30 01:32:34,276] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif:
[testng] [2024-06-30 01:32:34,370] [pool-1-thread-2] Initializing /data/qa-17270/alexa488.oir:
[testng] [2024-06-30 01:32:34,584] [pool-1-thread-9] Initializing /data/qa-17331/60x zstack RS.oir:
[testng] [2024-06-30 01:32:35,711] [pool-1-thread-5] Initializing /data/qa-17335/OSR-Z.oir:
[testng] [2024-06-30 01:32:36,101] [pool-1-thread-10] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir:
[testng] [2024-06-30 01:32:36,510] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir:
[testng] [2024-06-30 01:32:37,088] [pool-1-thread-6] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir:
[testng] [2024-06-30 01:32:37,641] [pool-1-thread-9] Initializing /data/qa-17335/stimulation_0001_LSM.oir:
[testng] [2024-06-30 01:32:37,973] [pool-1-thread-1] Initializing /data/qa-17270/image1.ome.tif:
[testng] [2024-06-30 01:32:38,316] [pool-1-thread-2] Initializing /data/qa-17293/2-z-t_0001_LSM.ome.tif:
[testng] [2024-06-30 01:32:38,679] [pool-1-thread-5] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif:
[testng] [2024-06-30 01:32:39,987] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.ome.tif:
[testng] [2024-06-30 01:32:40,182] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.oir:
[testng] [2024-06-30 01:32:40,280] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Clipboard-Image_0001_0001.tif:
[testng] [2024-06-30 01:32:40,379] [pool-1-thread-1] Initializing /data/qa-17270/stack1.ome.tif:
[testng] [2024-06-30 01:32:40,503] [pool-1-thread-2] Initializing /data/qa-17335/Clipboard-OSR-Z.tif:
[testng] [2024-06-30 01:32:40,620] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.oir:
[testng] [2024-06-30 01:32:41,105] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.ome.tif:
[testng] [2024-06-30 01:32:41,277] [pool-1-thread-10] Initializing /data/qa-16881/P10D1 20150729_0024.oir:
[testng] [2024-06-30 01:32:41,857] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.oir:
[testng] [2024-06-30 01:32:42,064] [pool-1-thread-5] Initializing /data/qa-16881/W11-180 D3 20151021_0006.oir:
[testng] [2024-06-30 01:32:42,209] [pool-1-thread-4] Initializing /data/qa-17917/f10010.oir:
[testng] [2024-06-30 01:33:07,812] [pool-1-thread-1] Initializing /data/public/etienne/amy slice z stack_0001.ome.tif:
[testng] [2024-06-30 01:33:08,150] [pool-1-thread-6] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.oir:
[testng] [2024-06-30 01:33:08,488] [pool-1-thread-2] Initializing /data/qa-16881/W11-180 D3 20151021_0024.oir:
[testng] [2024-06-30 01:33:08,673] [pool-1-thread-9] Initializing /data/qa-17270/Clipboard-stack1.tif:
[testng] [2024-06-30 01:33:08,846] [pool-1-thread-12] Initializing /data/qa-18802/20171020_JupGFPHisRFP_L3_30xSI_galvo_p5z_p1xy_better_than_nyquist.oir:
[testng] [2024-06-30 01:33:09,937] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.oir:
[testng] [2024-06-30 01:33:10,254] [pool-1-thread-5] Initializing /data/public/etienne/coupe shg stack_0001.ome.tif:
[testng] [2024-06-30 01:33:10,519] [pool-1-thread-1] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0001.tif:
[testng] [2024-06-30 01:33:10,778] [pool-1-thread-2] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-Caged Glu-3 point.tif:
[testng] [2024-06-30 01:33:10,923] [pool-1-thread-9] Initializing /data/olympus/Stitched_XYZ.oir:
[testng] [2024-06-30 01:33:11,359] [pool-1-thread-6] Initializing /data/olympus/Stitched_XYZ.ome.tif:
[testng] [2024-06-30 01:33:11,559] [pool-1-thread-10] Initializing /data/qa-16871/XY_0003.oir:
[testng] [2024-06-30 01:33:12,064] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.oir:
[testng] [2024-06-30 01:33:12,187] [pool-1-thread-5] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi:
[testng] [2024-06-30 01:33:12,434] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi:
[testng] [2024-06-30 01:33:12,614] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-P10D1 20150729.tif:
[testng] [2024-06-30 01:33:12,895] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif:
[testng] [2024-06-30 01:33:13,026] [pool-1-thread-1] Initializing /data/qa-16881/P10-50 D2.oir:
[testng] [2024-06-30 01:33:13,190] [pool-1-thread-11] Initializing /data/qa-17409/Stitch_A01_G001.oir:
[testng] [2024-06-30 01:33:14,383] [pool-1-thread-10] Initializing /data/qa-16881/W11-180 D3 20151021_0024.ome.tif:
[testng] [2024-06-30 01:33:14,500] [pool-1-thread-5] Initializing /data/qa-16881/Clipboard-W4-0 D14 New 20150828_0007.tif:
[testng] [2024-06-30 01:33:14,687] [pool-1-thread-2] Initializing /data/olympus/2017-04-20/mito_0006_0001.ome.tif:
[testng] [2024-06-30 01:33:14,757] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.oir:
[testng] [2024-06-30 01:33:15,044] [pool-1-thread-1] Initializing /data/olympus/Clipboard-stitched 4x4 zstack 10X_XYZ.tif:
[testng] [2024-06-30 01:33:15,323] [pool-1-thread-6] Initializing /data/qa-17293/Clipboard.tif:
[testng] [2024-06-30 01:33:15,748] [pool-1-thread-9] Initializing /data/qa-17335/1.oir:
[testng] [2024-06-30 01:33:15,822] [pool-1-thread-5] Initializing /data/olympus/XYZt.ome.tif:
[testng] [2024-06-30 01:33:16,023] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Clipboard-Image_0091_0001.tif:
[testng] [2024-06-30 01:33:16,156] [pool-1-thread-10] Initializing /data/qa-17293/2-z-t_0001_LSM.oir:
[testng] [2024-06-30 01:33:16,517] [pool-1-thread-1] Initializing /data/olympus/XYZt.oir:
[testng] [2024-06-30 01:33:17,839] [pool-1-thread-6] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.ome.tif:
[testng] [2024-06-30 01:33:17,973] [pool-1-thread-9] Initializing /data/qa-16871/XY_0003.ome.tif:
[testng] [2024-06-30 01:33:18,257] [pool-1-thread-10] Initializing /data/public/etienne/venus stack.ome.tif:
[testng] [2024-06-30 01:33:18,465] [pool-1-thread-2] Initializing /data/qa-17270/Clipboard-image1.tif:
[testng] [2024-06-30 01:33:19,175] [pool-1-thread-9] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir:
[testng] [2024-06-30 01:33:19,611] [pool-1-thread-11] Initializing /data/qa-17922/example_multipart.oir:
[testng] [2024-06-30 01:33:38,512] [pool-1-thread-6] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir:
[testng] [2024-06-30 01:33:42,128] [pool-1-thread-5] Initializing /data/olympus/_calcium sparks_XYt_/stack1/frame_t_0.ets:
[testng] [2024-06-30 01:33:42,211] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif:
[testng] [2024-06-30 01:33:42,367] [pool-1-thread-10] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif:
[testng] [2024-06-30 01:33:42,949] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir:
[testng] [2024-06-30 01:33:43,114] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif:
[testng] [2024-06-30 01:33:43,327] [pool-1-thread-5] Initializing /data/public/etienne/amy slice z stack_0001.oir:
[testng] [2024-06-30 01:33:43,786] [pool-1-thread-9] Initializing /data/qa-16881/P10-50 D2_0006.oir:
[testng] [2024-06-30 01:33:44,017] [pool-1-thread-10] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.ome.tif:
[testng] [2024-06-30 01:33:44,200] [pool-1-thread-8] Initializing /data/olympus/calcium sparks_XYt.oir:
[testng] [2024-06-30 01:33:45,184] [pool-1-thread-2] Initializing /data/qa-16881/Clipboard-P10-50 D2.tif:
[testng] [2024-06-30 01:33:45,223] [pool-1-thread-12] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir:
[testng] [2024-06-30 01:33:45,304] [pool-1-thread-5] Initializing /data/qa-17331/Clipboard.tif:
[testng] [2024-06-30 01:33:45,717] [pool-1-thread-9] Initializing /data/qa-16881/Clipboard-W1-135 D6 New 20150818_0010.tif:
[testng] [2024-06-30 01:33:45,962] [pool-1-thread-10] Initializing /data/olympus/spectral_scan_XYL.oir:
[testng] [2024-06-30 01:33:47,008] [pool-1-thread-2] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-PA-GFPv-2.tif:
[testng] [2024-06-30 01:33:47,212] [pool-1-thread-5] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.oir:
[testng] [2024-06-30 01:33:48,041] [pool-1-thread-9] Initializing /data/olympus/Clipboard-XYZt.tif:
[testng] [2024-06-30 01:33:48,151] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif:
[testng] [2024-06-30 01:33:48,241] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif:
[testng] [2024-06-30 01:33:49,076] [pool-1-thread-2] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.oir:
[testng] [2024-06-30 01:33:49,609] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif:
[testng] [2024-06-30 01:33:49,658] [pool-1-thread-1] Initializing /data/qa-17222/ps245 red tubulin green 60x-1.oir.vsi:
[testng] [2024-06-30 01:33:49,799] [pool-1-thread-9] Initializing /data/qa-17335/OSR-Z.ome.tif:
[testng] [2024-06-30 01:33:49,859] [pool-1-thread-10] Initializing /data/olympus/spectral_scan_XYL.ome.tif:
[testng] [2024-06-30 01:33:50,956] [pool-1-thread-8] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.ome.tif:
[testng] [2024-06-30 01:33:51,035] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.ome.tif:
[testng] [2024-06-30 01:33:51,349] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-P10-50 D2_0019.tif:
[testng] [2024-06-30 01:33:51,403] [pool-1-thread-1] Initializing /data/olympus/2017-04-20/Clipboard.tif:
[testng] [2024-06-30 01:33:51,440] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.oir:
[testng] [2024-06-30 01:33:51,635] [pool-1-thread-2] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0024.tif:
[testng] [2024-06-30 01:33:51,881] [pool-1-thread-5] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif:
[testng] [2024-06-30 01:33:52,352] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Clipboard-Image_0079_0001.tif:
[testng] [2024-06-30 01:33:52,637] [pool-1-thread-12] Initializing /data/olympus/2021-04-20/overview 2 x_Cycle_01/matl.omp2info:
[testng] [2024-06-30 01:33:52,709] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir:
[testng] [2024-06-30 01:33:53,110] [pool-1-thread-2] Initializing /data/olympus/2017-04-20/mito_0006_0001.oir:
[testng] [2024-06-30 01:33:53,205] [pool-1-thread-10] Initializing /data/qa-16881/P10D1 20150729.oir:
[testng] [2024-06-30 01:33:53,380] [pool-1-thread-8] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z_CONTROL.oir:
[testng] [2024-06-30 01:33:54,046] [pool-1-thread-5] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info:
[testng] [2024-06-30 01:33:56,644] [pool-1-thread-9] Initializing /data/qa-16881/P10D1 20150729_0019.ome.tif:
[testng] [2024-06-30 01:33:56,744] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.ome.tif:
[testng] [2024-06-30 01:33:56,844] [pool-1-thread-2] Initializing /data/qa-17335/1.ome.tif:
[testng] [2024-06-30 01:33:57,459] [pool-1-thread-12] Initializing /data/olympus/calcium sparks.jpg:
[testng] [2024-06-30 01:33:57,548] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-W1-75 D11 New 20150825_0004.tif:
[testng] [2024-06-30 01:33:58,206] [pool-1-thread-2] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.ome.tif:
[testng] [2024-06-30 01:33:58,306] [pool-1-thread-9] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir:
[testng] [2024-06-30 01:33:58,706] [pool-1-thread-8] Initializing /data/public/etienne/coupe shg stack_0001.oir:
[testng] [2024-06-30 01:33:58,947] [pool-1-thread-1] Initializing /data/qa-17409/Stitch_A01_G001-exported.ome.tif:
[testng] [2024-06-30 01:33:59,273] [pool-1-thread-10] Initializing /data/qa-16871/Clipboard.tif:
[testng] [2024-06-30 01:33:59,963] [pool-1-thread-2] Initializing /data/qa-16881/P10-50 D2_0019.ome.tif:
[testng] [2024-06-30 01:34:00,298] [pool-1-thread-12] Initializing /data/olympus/2017-11-20/fish_overview/fish-overview-night.oir:
[testng] [2024-06-30 01:34:04,928] [pool-1-thread-10] Initializing /data/qa-17335/Clipboard-1.tif:
[testng] [2024-06-30 01:34:05,035] [pool-1-thread-8] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif:
[testng] [2024-06-30 01:34:05,970] [pool-1-thread-2] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir:
[testng] [2024-06-30 01:34:06,196] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif:
[testng] [2024-06-30 01:34:06,295] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif:
[testng] [2024-06-30 01:34:06,416] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif:
[testng] [2024-06-30 01:34:07,341] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.oir:
[testng] [2024-06-30 01:34:07,460] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Clipboard-Image_0050_0001.tif:
[testng] [2024-06-30 01:34:07,572] [pool-1-thread-10] Initializing /data/olympus/2017-11-20/xytz_golgi/xytz_golgi.oir:
[testng] [2024-06-30 01:34:08,420] [pool-1-thread-1] Initializing /data/qa-16881/P10D1 20150729_0024.ome.tif:
[testng] [2024-06-30 01:34:09,411] [pool-1-thread-9] Initializing /data/qa-17409/Clipboard.tif:
[testng] [2024-06-30 01:34:09,456] [pool-1-thread-2] Initializing /data/olympus/Clipboard-40X_4CH_XY.tif:
[testng] [2024-06-30 01:34:09,505] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/zebra shg.oir:
[testng] [2024-06-30 01:34:11,713] [pool-1-thread-1] Initializing /data/qa-16881/P10-50 D2.ome.tif:
[testng] [2024-06-30 01:34:12,289] [pool-1-thread-9] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir:
[testng] [2024-06-30 01:34:12,466] [pool-1-thread-2] Initializing /data/olympus/calcium sparks_XYt.ome.tif:
[testng] [2024-06-30 01:34:13,429] [pool-1-thread-1] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0024.tif:
[testng] [2024-06-30 01:34:14,098] [pool-1-thread-9] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/matl.omp2info:
[testng] [2024-06-30 01:34:16,916] [pool-1-thread-2] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/matl.omp2info:
[testng] [2024-06-30 01:34:19,100] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif:
[testng] [2024-06-30 01:34:19,153] [pool-1-thread-1] Initializing /data/qa-17270/alexa488.ome.tif:
[testng] [2024-06-30 01:34:20,336] [pool-1-thread-6] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif:
[testng] [2024-06-30 01:34:21,456] [pool-1-thread-1] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir:
[testng] [2024-06-30 01:34:21,803] [pool-1-thread-10] Initializing /data/qa-16881/P10-50 D2_0019.oir:
[testng] [2024-06-30 01:34:22,167] [pool-1-thread-6] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi:
[testng] [2024-06-30 01:34:23,853] [pool-1-thread-10] Initializing /data/olympus/40X_4CH_XY.ome.tif:
[testng] [2024-06-30 01:34:24,299] [pool-1-thread-6] Initializing /data/olympus/Stitched_XYZ.vsi:
[testng] [2024-06-30 01:34:24,622] [pool-1-thread-1] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif:
[testng] [2024-06-30 01:34:25,536] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif:
[testng] [2024-06-30 01:34:26,105] [pool-1-thread-1] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir:
[testng] [2024-06-30 01:34:27,361] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 9858, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 42 minutes 47 seconds
Finished: SUCCESS