Started by upstream project "BIOFORMATS-test-repo" build number 108
originally caused by:
Started by upstream project "Trigger" build number 120
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@4
[BIOFORMATS-test-folder@4] $ /bin/bash -xe /tmp/jenkins13451178133503791434.sh
+ '[' afi = slidebook ']'
++ date +%u
+ '[' 1 -le 1 ']'
+ DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR'
+ sudo docker run --rm --name BIOFORMATS-test-folder_16782_merge_ci -v /uod/idr/repos/curated/afi:/data -v /uod/idr-scratch/merge-ci/curated/afi:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 03:03:50,968 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 03:03:51,024 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 03:03:51,058 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 03:03:51,058 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 03:03:51,069 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 03:03:51,070 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 03:03:51,070 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 03:03:51,070 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 03:03:51,071 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5c30a9b0 - End of configuration.
[testng] 03:03:51,072 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@7a69b07 - Registering current configuration as safe fallback point
[testng] 03:03:51,072 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5e82df6a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 494 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-07-01 03:03:51,084] [main] java.version = 1.8.0_342
[testng] 03:03:51,088 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 03:03:51,088 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:03:51,144 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-01_03-03-51.log]
[testng] 03:03:51,147 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
[testng] [2024-07-01 03:03:51,150] [main] testng.directory = /data
[testng] [2024-07-01 03:03:51,150] [main] testng.configDirectory = /config
[testng] [2024-07-01 03:03:51,166] [main] testng.multiplier = 1.0
[testng] [2024-07-01 03:03:51,167] [main] testng.in-memory = false
[testng] [2024-07-01 03:03:51,167] [main] testng.allow-missing = false
[testng] [2024-07-01 03:03:51,167] [main] user.language = fr
[testng] [2024-07-01 03:03:51,167] [main] user.country = FR
[testng] [2024-07-01 03:03:51,167] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2024-07-01 03:03:52,099] [main] ----------------------------------------
[testng] [2024-07-01 03:03:52,099] [main] Total files: 16
[testng] [2024-07-01 03:03:52,099] [main] Scan time: 0.932 s (58 ms/file)
[testng] [2024-07-01 03:03:52,099] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 15 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-07-01 03:04:03,852] [pool-1-thread-1] Initializing /data/samples/5400.afi:
[testng] 03:04:03,852 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 03:04:03,852 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:04:03,854 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-01_03-04-03.log]
[testng] 03:04:03,855 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2ada7b9b - End of configuration.
[testng] [2024-07-01 03:04:03,999] [pool-1-thread-12] Initializing /data/samples/5351.afi:
[testng] 03:04:04,000 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 03:04:04,000 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:04:04,002 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-01_03-04-04.log]
[testng] 03:04:04,002 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5808f0ce - End of configuration.
[testng] [2024-07-01 03:04:04,158] [pool-1-thread-11] Initializing /data/samples/5306.afi:
[testng] 03:04:04,159 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 03:04:04,159 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:04:04,160 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-01_03-04-04.log]
[testng] 03:04:04,160 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2c1ad554 - End of configuration.
[testng] [2024-07-01 03:04:04,241] [pool-1-thread-10] Initializing /data/samples/5383.afi:
[testng] 03:04:04,242 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 03:04:04,242 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:04:04,245 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-01_03-04-04.log]
[testng] 03:04:04,247 |-INFO in ch.qos.logback.core.sift.SiftProcessor@20205db1 - End of configuration.
[testng] [2024-07-01 03:04:04,399] [pool-1-thread-9] Initializing /data/samples/5365.afi:
[testng] 03:04:04,399 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 03:04:04,399 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:04:04,400 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-01_03-04-04.log]
[testng] 03:04:04,400 |-INFO in ch.qos.logback.core.sift.SiftProcessor@859a191 - End of configuration.
[testng] [2024-07-01 03:04:04,470] [pool-1-thread-8] Initializing /data/samples/5440.afi:
[testng] 03:04:04,471 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 03:04:04,471 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:04:04,471 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-01_03-04-04.log]
[testng] 03:04:04,472 |-INFO in ch.qos.logback.core.sift.SiftProcessor@42090c15 - End of configuration.
[testng] [2024-07-01 03:04:04,741] [pool-1-thread-7] Initializing /data/samples/5446.afi:
[testng] 03:04:04,742 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 03:04:04,742 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:04:04,744 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-01_03-04-04.log]
[testng] 03:04:04,746 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4935af23 - End of configuration.
[testng] [2024-07-01 03:04:04,840] [pool-1-thread-6] Initializing /data/samples/5339.afi:
[testng] 03:04:04,840 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 03:04:04,840 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:04:04,841 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-01_03-04-04.log]
[testng] 03:04:04,841 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1f5a89bb - End of configuration.
[testng] [2024-07-01 03:04:04,924] [pool-1-thread-5] Initializing /data/samples/5387.afi:
[testng] 03:04:04,924 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 03:04:04,924 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:04:04,925 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-01_03-04-04.log]
[testng] 03:04:04,946 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7b90401b - End of configuration.
[testng] [2024-07-01 03:04:05,058] [pool-1-thread-4] Initializing /data/samples/5407.afi:
[testng] 03:04:05,058 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 03:04:05,058 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:04:05,059 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-01_03-04-05.log]
[testng] 03:04:05,060 |-INFO in ch.qos.logback.core.sift.SiftProcessor@72dec48c - End of configuration.
[testng] [2024-07-01 03:04:05,140] [pool-1-thread-3] Initializing /data/samples/5347.afi:
[testng] 03:04:05,141 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 03:04:05,141 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:04:05,142 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-01_03-04-05.log]
[testng] 03:04:05,143 |-INFO in ch.qos.logback.core.sift.SiftProcessor@534b3b30 - End of configuration.
[testng] [2024-07-01 03:04:05,245] [pool-1-thread-2] Initializing /data/samples/5358.afi:
[testng] 03:04:05,246 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 03:04:05,246 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:04:05,247 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-01_03-04-05.log]
[testng] 03:04:05,248 |-INFO in ch.qos.logback.core.sift.SiftProcessor@658cc666 - End of configuration.
[testng] [2024-07-01 03:04:58,283] [pool-1-thread-1] Initializing /data/samples/5414.afi:
[testng] [2024-07-01 03:05:00,554] [pool-1-thread-8] Initializing /data/samples/5343.afi:
[testng] [2024-07-01 03:05:04,669] [pool-1-thread-3] Initializing /data/samples/5371.afi:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 795, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 2 minutes 5 seconds
Finished: SUCCESS