Started by upstream project "BIOFORMATS-test-repo" build number 108 originally caused by: Started by upstream project "Trigger" build number 120 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8 [BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins3007798404670686896.sh + '[' ventana = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_16802_merge_ci -v /uod/idr/repos/curated/ventana:/data -v /uod/idr-scratch/merge-ci/curated/ventana:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 03:27:21,474 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 03:27:21,514 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 03:27:21,547 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 03:27:21,547 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 03:27:21,558 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 03:27:21,559 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 03:27:21,559 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 03:27:21,559 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 03:27:21,559 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5c30a9b0 - End of configuration. [testng] 03:27:21,560 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@7a69b07 - Registering current configuration as safe fallback point [testng] 03:27:21,560 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5e82df6a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 403 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-07-01 03:27:21,573] [main] java.version = 1.8.0_342 [testng] 03:27:21,577 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 03:27:21,577 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:27:21,630 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-01_03-27-21.log] [testng] 03:27:21,632 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-07-01 03:27:21,634] [main] testng.directory = /data [testng] [2024-07-01 03:27:21,634] [main] testng.configDirectory = /config [testng] [2024-07-01 03:27:21,649] [main] testng.multiplier = 1.0 [testng] [2024-07-01 03:27:21,649] [main] testng.in-memory = false [testng] [2024-07-01 03:27:21,649] [main] testng.allow-missing = false [testng] [2024-07-01 03:27:21,649] [main] user.language = fr [testng] [2024-07-01 03:27:21,649] [main] user.country = FR [testng] [2024-07-01 03:27:21,649] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-07-01 03:27:22,399] [main] ---------------------------------------- [testng] [2024-07-01 03:27:22,399] [main] Total files: 10 [testng] [2024-07-01 03:27:22,400] [main] Scan time: 0.749 s (74 ms/file) [testng] [2024-07-01 03:27:22,400] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 10 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-07-01 03:27:29,173] [pool-1-thread-1] Initializing /data/public/openslide/OS-2.bif: [testng] 03:27:29,173 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 03:27:29,173 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:27:29,175 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-01_03-27-29.log] [testng] 03:27:29,176 |-INFO in ch.qos.logback.core.sift.SiftProcessor@26758be7 - End of configuration. [testng] [2024-07-01 03:27:29,423] [pool-1-thread-10] Initializing /data/gh3570/UMFZ-_175_06142018091319AM.bif: [testng] 03:27:29,423 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 03:27:29,423 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:27:29,424 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-01_03-27-29.log] [testng] 03:27:29,425 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6d2268eb - End of configuration. [testng] [2024-07-01 03:27:29,780] [pool-1-thread-9] Initializing /data/qa-11086/3.bif: [testng] 03:27:29,781 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 03:27:29,781 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:27:29,782 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-01_03-27-29.log] [testng] 03:27:29,783 |-INFO in ch.qos.logback.core.sift.SiftProcessor@30abf17b - End of configuration. [testng] [2024-07-01 03:27:30,110] [pool-1-thread-8] Initializing /data/qa-11086/2.bif: [testng] 03:27:30,111 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 03:27:30,111 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:27:30,112 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-01_03-27-30.log] [testng] 03:27:30,113 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7b84d23f - End of configuration. [testng] [2024-07-01 03:27:30,239] [pool-1-thread-7] Initializing /data/qa-11086/CASO_2_20X_HD_4_16.bif: [testng] 03:27:30,239 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 03:27:30,239 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:27:30,240 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-01_03-27-30.log] [testng] 03:27:30,241 |-INFO in ch.qos.logback.core.sift.SiftProcessor@ff52a84 - End of configuration. [testng] [2024-07-01 03:27:30,356] [pool-1-thread-6] Initializing /data/gh-3927/imagesc-75002/ome-bioformats-bug.bif: [testng] 03:27:30,357 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 03:27:30,357 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:27:30,358 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-01_03-27-30.log] [testng] 03:27:30,358 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6c759593 - End of configuration. [testng] [2024-07-01 03:27:30,557] [pool-1-thread-5] Initializing /data/qa-27763/QuPath Bio-Formats sample file.tif: [testng] 03:27:30,557 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 03:27:30,558 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:27:30,559 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-01_03-27-30.log] [testng] 03:27:30,559 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7fecdea - End of configuration. [testng] [2024-07-01 03:27:31,156] [pool-1-thread-4] Initializing /data/public/openslide/OS-1.bif: [testng] 03:27:31,156 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 03:27:31,156 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:27:31,157 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-01_03-27-31.log] [testng] 03:27:31,158 |-INFO in ch.qos.logback.core.sift.SiftProcessor@d0ae70e - End of configuration. [testng] [2024-07-01 03:27:31,480] [pool-1-thread-3] Initializing /data/gh-3927/imagesc-75221/A-180000004-01-M-001.bif: [testng] 03:27:31,481 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 03:27:31,481 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:27:31,483 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-01_03-27-31.log] [testng] 03:27:31,486 |-INFO in ch.qos.logback.core.sift.SiftProcessor@33398132 - End of configuration. [testng] [2024-07-01 03:27:31,682] [pool-1-thread-2] Initializing /data/gh-3927/imagesc-75221/B-210004684-01-A-001.bif: [testng] 03:27:31,683 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 03:27:31,683 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:27:31,685 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-01_03-27-31.log] [testng] 03:27:31,686 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4d3757f3 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 530, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 1 minute 23 seconds Finished: SUCCESS