Started by upstream project "BIOFORMATS-test-repo" build number 110
originally caused by:
Started by upstream project "Trigger" build number 123
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6
[BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins799404505236496800.sh
+ '[' hitachi = slidebook ']'
++ date +%u
+ '[' 3 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_17045_merge_ci -v /uod/idr/repos/curated/hitachi:/data -v /uod/idr-scratch/merge-ci/curated/hitachi:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
[testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
[testng] File leak detector installed
[testng] 01:23:06,308 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 01:23:06,310 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service.
[testng] 01:23:06,310 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:23:06,311 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:23:06,311 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 01:23:06,312 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 01:23:06,312 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 01:23:06,312 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:23:06,313 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:23:06,313 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 01:23:06,314 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 01:23:06,314 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 01:23:06,511 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 01:23:06,511 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 01:23:06,540 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 01:23:06,540 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 01:23:06,546 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 01:23:06,546 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 01:23:06,547 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 01:23:06,547 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 01:23:06,547 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration.
[testng] 01:23:06,548 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point
[testng] 01:23:06,548 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 235 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-07-03 01:23:06,558] [main] java.version = 17.0.2
[testng] 01:23:06,562 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 01:23:06,562 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:23:06,607 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-03_01-23-06.log]
[testng] 01:23:06,609 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration.
[testng] [2024-07-03 01:23:06,612] [main] testng.directory = /data
[testng] [2024-07-03 01:23:06,612] [main] testng.configDirectory = /config
[testng] [2024-07-03 01:23:06,623] [main] testng.multiplier = 1.0
[testng] [2024-07-03 01:23:06,624] [main] testng.in-memory = false
[testng] [2024-07-03 01:23:06,624] [main] testng.allow-missing = false
[testng] [2024-07-03 01:23:06,624] [main] user.language = en
[testng] [2024-07-03 01:23:06,624] [main] user.country = ${user.country}
[testng] [2024-07-03 01:23:06,624] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-07-03 01:23:07,873] [main] ----------------------------------------
[testng] [2024-07-03 01:23:07,873] [main] Total files: 21
[testng] [2024-07-03 01:23:07,873] [main] Scan time: 1.249 s (59 ms/file)
[testng] [2024-07-03 01:23:07,873] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 18 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-07-03 01:23:10,523] [pool-1-thread-1] Initializing /data/stefan/001_q01.txt:
[testng] 01:23:10,523 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 01:23:10,523 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:23:10,524 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-03_01-23-10.log]
[testng] 01:23:10,524 |-INFO in ch.qos.logback.core.sift.SiftProcessor@286d7c7a - End of configuration.
[testng] [2024-07-03 01:23:10,565] [pool-1-thread-12] Initializing /data/stefan/001_q12.txt:
[testng] 01:23:10,565 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 01:23:10,566 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:23:10,567 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-03_01-23-10.log]
[testng] 01:23:10,567 |-INFO in ch.qos.logback.core.sift.SiftProcessor@46ac704e - End of configuration.
[testng] [2024-07-03 01:23:10,661] [pool-1-thread-11] Initializing /data/stefan/001_q11.txt:
[testng] 01:23:10,661 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 01:23:10,661 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:23:10,662 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-03_01-23-10.log]
[testng] 01:23:10,662 |-INFO in ch.qos.logback.core.sift.SiftProcessor@184fc988 - End of configuration.
[testng] [2024-07-03 01:23:10,731] [pool-1-thread-10] Initializing /data/stefan/001_q05.txt:
[testng] 01:23:10,731 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 01:23:10,731 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:23:10,732 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-03_01-23-10.log]
[testng] 01:23:10,732 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4abfd4b4 - End of configuration.
[testng] [2024-07-03 01:23:10,762] [pool-1-thread-9] Initializing /data/stefan/001_q04.txt:
[testng] 01:23:10,763 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 01:23:10,763 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:23:10,764 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-03_01-23-10.log]
[testng] 01:23:10,764 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6e93564c - End of configuration.
[testng] [2024-07-03 01:23:10,792] [pool-1-thread-8] Initializing /data/stefan/001_q03.txt:
[testng] 01:23:10,792 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 01:23:10,792 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:23:10,793 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-03_01-23-10.log]
[testng] 01:23:10,793 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2b251b6 - End of configuration.
[testng] [2024-07-03 01:23:10,818] [pool-1-thread-7] Initializing /data/stefan/001_q17.txt:
[testng] 01:23:10,818 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 01:23:10,818 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:23:10,819 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-03_01-23-10.log]
[testng] 01:23:10,819 |-INFO in ch.qos.logback.core.sift.SiftProcessor@f38e7a0 - End of configuration.
[testng] [2024-07-03 01:23:10,921] [pool-1-thread-6] Initializing /data/stefan/001_q06.txt:
[testng] 01:23:10,921 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 01:23:10,921 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:23:10,922 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-03_01-23-10.log]
[testng] 01:23:10,923 |-INFO in ch.qos.logback.core.sift.SiftProcessor@25ba9a77 - End of configuration.
[testng] [2024-07-03 01:23:10,949] [pool-1-thread-5] Initializing /data/stefan/001_q08.txt:
[testng] 01:23:10,949 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 01:23:10,950 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:23:10,950 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-03_01-23-10.log]
[testng] 01:23:10,951 |-INFO in ch.qos.logback.core.sift.SiftProcessor@718bc636 - End of configuration.
[testng] [2024-07-03 01:23:11,042] [pool-1-thread-4] Initializing /data/stefan/001_q15.txt:
[testng] 01:23:11,042 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 01:23:11,042 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:23:11,043 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-03_01-23-11.log]
[testng] 01:23:11,043 |-INFO in ch.qos.logback.core.sift.SiftProcessor@a144f87 - End of configuration.
[testng] [2024-07-03 01:23:11,081] [pool-1-thread-3] Initializing /data/stefan/001_q09.txt:
[testng] 01:23:11,081 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 01:23:11,081 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:23:11,082 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-03_01-23-11.log]
[testng] 01:23:11,082 |-INFO in ch.qos.logback.core.sift.SiftProcessor@52f26b39 - End of configuration.
[testng] [2024-07-03 01:23:11,184] [pool-1-thread-2] Initializing /data/stefan/001_q02.txt:
[testng] 01:23:11,184 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 01:23:11,185 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:23:11,186 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-03_01-23-11.log]
[testng] 01:23:11,186 |-INFO in ch.qos.logback.core.sift.SiftProcessor@509d8d7d - End of configuration.
[testng] [2024-07-03 01:23:13,883] [pool-1-thread-4] Initializing /data/stefan/001_q10.txt:
[testng] [2024-07-03 01:23:13,939] [pool-1-thread-2] Initializing /data/stefan/001_q14.txt:
[testng] [2024-07-03 01:23:13,967] [pool-1-thread-8] Initializing /data/stefan/001_q07.txt:
[testng] [2024-07-03 01:23:14,031] [pool-1-thread-1] Initializing /data/stefan/001_q18.txt:
[testng] [2024-07-03 01:23:14,103] [pool-1-thread-3] Initializing /data/stefan/001_q13.txt:
[testng] [2024-07-03 01:23:14,147] [pool-1-thread-5] Initializing /data/stefan/001_q16.txt:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 954, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 14 seconds
Finished: SUCCESS