Started by upstream project "BIOFORMATS-test-repo" build number 11
originally caused by:
Started by upstream project "Trigger" build number 14
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6
[BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins7261050783285443020.sh
+ '[' fuji = slidebook ']'
++ date +%u
+ '[' 1 -le 1 ']'
+ DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR'
+ sudo docker run --rm --name BIOFORMATS-test-folder_1712_merge_ci -v /uod/idr/repos/curated/fuji:/data -v /uod/idr-scratch/merge-ci/curated/fuji:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 01:32:55,691 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 01:32:55,751 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 01:32:55,802 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 01:32:55,803 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 01:32:55,824 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 01:32:55,825 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 01:32:55,825 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 01:32:55,827 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 01:32:55,827 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5c30a9b0 - End of configuration.
[testng] 01:32:55,829 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@7a69b07 - Registering current configuration as safe fallback point
[testng] 01:32:55,829 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5e82df6a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 491 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-03-25 01:32:55,849] [main] java.version = 1.8.0_342
[testng] 01:32:55,855 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 01:32:55,855 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:32:55,946 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-03-25_01-32-55.log]
[testng] 01:32:55,950 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
[testng] [2024-03-25 01:32:55,954] [main] testng.directory = /data
[testng] [2024-03-25 01:32:55,955] [main] testng.configDirectory = /config
[testng] [2024-03-25 01:32:55,969] [main] testng.multiplier = 1.0
[testng] [2024-03-25 01:32:55,970] [main] testng.in-memory = false
[testng] [2024-03-25 01:32:55,970] [main] testng.allow-missing = false
[testng] [2024-03-25 01:32:55,970] [main] user.language = fr
[testng] [2024-03-25 01:32:55,970] [main] user.country = FR
[testng] [2024-03-25 01:32:55,970] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2024-03-25 01:33:01,088] [main] ----------------------------------------
[testng] [2024-03-25 01:33:01,089] [main] Total files: 24
[testng] [2024-03-25 01:33:01,089] [main] Scan time: 5.118 s (213 ms/file)
[testng] [2024-03-25 01:33:01,089] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 9 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-03-25 01:33:08,967] [pool-1-thread-1] Initializing /data/bernie/101110_Oligos_16hour/101110_Oligos_16hour.tif:
[testng] 01:33:08,968 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 01:33:08,968 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:33:08,969 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-03-25_01-33-08.log]
[testng] 01:33:08,970 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6cac3314 - End of configuration.
[testng] [2024-03-25 01:33:09,417] [pool-1-thread-9] Initializing /data/bernie/101210_Substrate10mi/101210_Substrate10mi.tif:
[testng] 01:33:09,418 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 01:33:09,418 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:33:09,419 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-03-25_01-33-09.log]
[testng] 01:33:09,420 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6b73869f - End of configuration.
[testng] [2024-03-25 01:33:09,900] [pool-1-thread-8] Initializing /data/bernie/080211_Exo_3hours/080211_Exo_3hours.tif:
[testng] 01:33:09,901 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 01:33:09,901 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:33:09,903 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-03-25_01-33-09.log]
[testng] 01:33:09,904 |-INFO in ch.qos.logback.core.sift.SiftProcessor@673cd323 - End of configuration.
[testng] [2024-03-25 01:33:10,432] [pool-1-thread-7] Initializing /data/bernie/120411_18hrs/120411_18hrs.tif:
[testng] 01:33:10,433 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 01:33:10,433 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:33:10,434 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-03-25_01-33-10.log]
[testng] 01:33:10,435 |-INFO in ch.qos.logback.core.sift.SiftProcessor@42e785b5 - End of configuration.
[testng] [2024-03-25 01:33:10,929] [pool-1-thread-6] Initializing /data/bernie/101210_SubstrateTest/101210_SubstrateTest.tif:
[testng] 01:33:10,930 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 01:33:10,930 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:33:10,931 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-03-25_01-33-10.log]
[testng] 01:33:10,932 |-INFO in ch.qos.logback.core.sift.SiftProcessor@63054ff7 - End of configuration.
[testng] [2024-03-25 01:33:11,484] [pool-1-thread-5] Initializing /data/venu/TPN_membraneC_1sec.img:
[testng] 01:33:11,485 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 01:33:11,485 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:33:11,486 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-03-25_01-33-11.log]
[testng] 01:33:11,487 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b0ffb8e - End of configuration.
[testng] [2024-03-25 01:33:11,707] [pool-1-thread-4] Initializing /data/bernie/101110_Oligos_10min/101110_Oligos_10min.tif:
[testng] 01:33:11,708 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 01:33:11,708 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:33:11,709 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-03-25_01-33-11.log]
[testng] 01:33:11,709 |-INFO in ch.qos.logback.core.sift.SiftProcessor@554a5a2c - End of configuration.
[testng] [2024-03-25 01:33:12,140] [pool-1-thread-3] Initializing /data/bernie/070810_20hours/070810_20hours.tif:
[testng] 01:33:12,141 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 01:33:12,141 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:33:12,142 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-03-25_01-33-12.log]
[testng] 01:33:12,143 |-INFO in ch.qos.logback.core.sift.SiftProcessor@56848e78 - End of configuration.
[testng] [2024-03-25 01:33:12,639] [pool-1-thread-2] Initializing /data/bernie/090810_18hours/090810_18hours.tif:
[testng] 01:33:12,640 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 01:33:12,640 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:33:12,642 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-03-25_01-33-12.log]
[testng] 01:33:12,642 |-INFO in ch.qos.logback.core.sift.SiftProcessor@17c2b96 - End of configuration.
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 477, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 35 seconds
Finished: SUCCESS