Started by upstream project "BIOFORMATS-test-repo" build number 112 originally caused by: Started by upstream project "Trigger" build number 125 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@4 [BIOFORMATS-test-folder@4] $ /bin/bash -xe /tmp/jenkins13942041810591118362.sh + '[' hitachi = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_17373_merge_ci -v /uod/idr/repos/curated/hitachi:/data -v /uod/idr-scratch/merge-ci/curated/hitachi:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 01:22:25,359 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:22:25,419 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:22:25,461 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:22:25,461 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:22:25,472 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:22:25,472 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:22:25,472 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:22:25,473 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:22:25,473 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5c30a9b0 - End of configuration. [testng] 01:22:25,474 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@7a69b07 - Registering current configuration as safe fallback point [testng] 01:22:25,474 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5e82df6a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 516 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-07-05 01:22:25,487] [main] java.version = 1.8.0_342 [testng] 01:22:25,492 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:22:25,493 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:25,542 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-05_01-22-25.log] [testng] 01:22:25,544 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-07-05 01:22:25,547] [main] testng.directory = /data [testng] [2024-07-05 01:22:25,547] [main] testng.configDirectory = /config [testng] [2024-07-05 01:22:25,571] [main] testng.multiplier = 1.0 [testng] [2024-07-05 01:22:25,571] [main] testng.in-memory = false [testng] [2024-07-05 01:22:25,571] [main] testng.allow-missing = false [testng] [2024-07-05 01:22:25,571] [main] user.language = en [testng] [2024-07-05 01:22:25,571] [main] user.country = ${user.country} [testng] [2024-07-05 01:22:25,571] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-07-05 01:22:26,898] [main] ---------------------------------------- [testng] [2024-07-05 01:22:26,898] [main] Total files: 21 [testng] [2024-07-05 01:22:26,899] [main] Scan time: 1.327 s (63 ms/file) [testng] [2024-07-05 01:22:26,899] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 18 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-07-05 01:22:29,449] [pool-1-thread-1] Initializing /data/stefan/001_q01.txt: [testng] 01:22:29,449 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:22:29,450 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:29,450 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-05_01-22-29.log] [testng] 01:22:29,451 |-INFO in ch.qos.logback.core.sift.SiftProcessor@74ae2322 - End of configuration. [testng] [2024-07-05 01:22:29,492] [pool-1-thread-12] Initializing /data/stefan/001_q12.txt: [testng] 01:22:29,492 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:22:29,493 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:29,493 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-05_01-22-29.log] [testng] 01:22:29,494 |-INFO in ch.qos.logback.core.sift.SiftProcessor@41d463ae - End of configuration. [testng] [2024-07-05 01:22:29,563] [pool-1-thread-11] Initializing /data/stefan/001_q04.txt: [testng] 01:22:29,563 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:22:29,563 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:29,564 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-05_01-22-29.log] [testng] 01:22:29,565 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1aa2d8a2 - End of configuration. [testng] [2024-07-05 01:22:29,595] [pool-1-thread-10] Initializing /data/stefan/001_q08.txt: [testng] 01:22:29,595 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:22:29,595 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:29,596 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-05_01-22-29.log] [testng] 01:22:29,596 |-INFO in ch.qos.logback.core.sift.SiftProcessor@578dfcdb - End of configuration. [testng] [2024-07-05 01:22:29,657] [pool-1-thread-9] Initializing /data/stefan/001_q14.txt: [testng] 01:22:29,658 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:22:29,658 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:29,658 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-05_01-22-29.log] [testng] 01:22:29,659 |-INFO in ch.qos.logback.core.sift.SiftProcessor@33f6cf9a - End of configuration. [testng] [2024-07-05 01:22:29,698] [pool-1-thread-8] Initializing /data/stefan/001_q02.txt: [testng] 01:22:29,698 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:22:29,698 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:29,699 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-05_01-22-29.log] [testng] 01:22:29,700 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6e392600 - End of configuration. [testng] [2024-07-05 01:22:29,724] [pool-1-thread-7] Initializing /data/stefan/001_q16.txt: [testng] 01:22:29,724 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:22:29,724 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:29,725 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-05_01-22-29.log] [testng] 01:22:29,725 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b12301a - End of configuration. [testng] [2024-07-05 01:22:29,767] [pool-1-thread-6] Initializing /data/stefan/001_q11.txt: [testng] 01:22:29,767 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:22:29,767 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:29,768 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-05_01-22-29.log] [testng] 01:22:29,768 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5f79419c - End of configuration. [testng] [2024-07-05 01:22:29,824] [pool-1-thread-5] Initializing /data/stefan/001_q06.txt: [testng] 01:22:29,824 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:22:29,824 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:29,825 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-05_01-22-29.log] [testng] 01:22:29,826 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3bc9323e - End of configuration. [testng] [2024-07-05 01:22:29,854] [pool-1-thread-4] Initializing /data/stefan/001_q10.txt: [testng] 01:22:29,854 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:22:29,854 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:29,855 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-05_01-22-29.log] [testng] 01:22:29,855 |-INFO in ch.qos.logback.core.sift.SiftProcessor@25127b7e - End of configuration. [testng] [2024-07-05 01:22:29,921] [pool-1-thread-3] Initializing /data/stefan/001_q07.txt: [testng] 01:22:29,921 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:22:29,921 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:29,922 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-05_01-22-29.log] [testng] 01:22:29,922 |-INFO in ch.qos.logback.core.sift.SiftProcessor@550e00 - End of configuration. [testng] [2024-07-05 01:22:30,019] [pool-1-thread-2] Initializing /data/stefan/001_q05.txt: [testng] 01:22:30,019 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:22:30,019 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:30,020 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-05_01-22-30.log] [testng] 01:22:30,020 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1745a8cc - End of configuration. [testng] [2024-07-05 01:22:32,694] [pool-1-thread-8] Initializing /data/stefan/001_q15.txt: [testng] [2024-07-05 01:22:32,739] [pool-1-thread-9] Initializing /data/stefan/001_q13.txt: [testng] [2024-07-05 01:22:32,783] [pool-1-thread-1] Initializing /data/stefan/001_q03.txt: [testng] [2024-07-05 01:22:32,814] [pool-1-thread-3] Initializing /data/stefan/001_q18.txt: [testng] [2024-07-05 01:22:32,884] [pool-1-thread-4] Initializing /data/stefan/001_q17.txt: [testng] [2024-07-05 01:22:32,973] [pool-1-thread-10] Initializing /data/stefan/001_q09.txt: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 954, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 14 seconds Finished: SUCCESS