Started by upstream project "BIOFORMATS-test-repo" build number 2
originally caused by:
 Started by upstream project "Trigger" build number 3
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder
[BIOFORMATS-test-folder] $ /bin/bash -xe /tmp/jenkins1459896532269478068.sh
+ '[' li-flim = slidebook ']'
++ date +%u
+ '[' 5 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_175_merge_ci -v /uod/idr/repos/curated/li-flim:/data -v /uod/idr-scratch/merge-ci/curated/li-flim:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test

test-automated:
   [testng] File leak detector installed
   [testng] 00:30:53,382 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 00:30:53,384 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service.
   [testng] 00:30:53,384 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 00:30:53,385 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 00:30:53,385 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 00:30:53,385 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 00:30:53,386 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 00:30:53,386 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 00:30:53,386 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 00:30:53,387 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 00:30:53,387 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 00:30:53,387 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 00:30:53,619 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 00:30:53,619 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 00:30:53,648 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 00:30:53,648 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 00:30:53,657 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 00:30:53,657 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 00:30:53,657 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 00:30:53,657 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 00:30:53,657 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration.
   [testng] 00:30:53,658 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point
   [testng] 00:30:53,658 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 272 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-03-15 00:30:53,669] [main] java.version = 1.8.0_342
   [testng] 00:30:53,672 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 00:30:53,672 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:30:53,719 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-03-15_00-30-53.log]
   [testng] 00:30:53,720 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
   [testng] [2024-03-15 00:30:53,722] [main] testng.directory = /data
   [testng] [2024-03-15 00:30:53,723] [main] testng.configDirectory = /config
   [testng] [2024-03-15 00:30:53,735] [main] testng.multiplier = 1.0
   [testng] [2024-03-15 00:30:53,736] [main] testng.in-memory = false
   [testng] [2024-03-15 00:30:53,736] [main] testng.allow-missing = false
   [testng] [2024-03-15 00:30:53,736] [main] user.language = en
   [testng] [2024-03-15 00:30:53,736] [main] user.country = ${user.country}
   [testng] [2024-03-15 00:30:53,736] [main] Maximum heap size = 13653 MB
   [testng] Scanning for files...
   [testng] [2024-03-15 00:30:54,867] [main] ----------------------------------------
   [testng] [2024-03-15 00:30:54,867] [main] Total files: 28
   [testng] [2024-03-15 00:30:54,867] [main] Scan time: 1.131 s (40 ms/file)
   [testng] [2024-03-15 00:30:54,867] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 26 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-03-15 00:30:58,712] [pool-1-thread-1] Initializing /data/samples/reference-extended.fli: 
   [testng] 00:30:58,712 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 00:30:58,712 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:30:58,713 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-03-15_00-30-58.log]
   [testng] 00:30:58,714 |-INFO in ch.qos.logback.core.sift.SiftProcessor@35be3e2d - End of configuration.
   [testng] [2024-03-15 00:30:58,800] [pool-1-thread-12] Initializing /data/qian/vxl-mbad-737-1um-01687.fli: 
   [testng] 00:30:58,800 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 00:30:58,800 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:30:58,801 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-03-15_00-30-58.log]
   [testng] 00:30:58,801 |-INFO in ch.qos.logback.core.sift.SiftProcessor@591ee691 - End of configuration.
   [testng] [2024-03-15 00:30:58,851] [pool-1-thread-11] Initializing /data/qa-17164/ExampleFile - LiFlimReader fix ExposureTime .fli: 
   [testng] 00:30:58,851 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 00:30:58,852 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:30:58,853 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-03-15_00-30-58.log]
   [testng] 00:30:58,853 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7f03439a - End of configuration.
   [testng] [2024-03-15 00:30:58,900] [pool-1-thread-10] Initializing /data/jean-marie/Flimdata/A Reference fluorescein4ns-CFPbpFILTER.fli: 
   [testng] 00:30:58,900 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 00:30:58,900 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:30:58,901 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-03-15_00-30-58.log]
   [testng] 00:30:58,901 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1e87e718 - End of configuration.
   [testng] [2024-03-15 00:30:58,975] [pool-1-thread-9] Initializing /data/LambertInstruments/LambertInstruments-fli-2/16-8bit_CameraSimulator_LI-Camera-Simulator.fli: 
   [testng] 00:30:58,976 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 00:30:58,976 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:30:58,976 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-03-15_00-30-58.log]
   [testng] 00:30:58,977 |-INFO in ch.qos.logback.core.sift.SiftProcessor@35b1eca8 - End of configuration.
   [testng] [2024-03-15 00:30:59,033] [pool-1-thread-8] Initializing /data/jean-marie/Flimdata/lif_A Sample CFP-and-CFPYFP-cells-CFPbpFILTER.fli: 
   [testng] 00:30:59,033 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 00:30:59,033 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:30:59,033 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-03-15_00-30-59.log]
   [testng] 00:30:59,034 |-INFO in ch.qos.logback.core.sift.SiftProcessor@15feb69e - End of configuration.
   [testng] [2024-03-15 00:30:59,070] [pool-1-thread-7] Initializing /data/samples/lifetime-extended.fli: 
   [testng] 00:30:59,070 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 00:30:59,070 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:30:59,071 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-03-15_00-30-59.log]
   [testng] 00:30:59,071 |-INFO in ch.qos.logback.core.sift.SiftProcessor@46276528 - End of configuration.
   [testng] [2024-03-15 00:30:59,120] [pool-1-thread-6] Initializing /data/samples/sample-extended.fli: 
   [testng] 00:30:59,120 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 00:30:59,120 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:30:59,121 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-03-15_00-30-59.log]
   [testng] 00:30:59,121 |-INFO in ch.qos.logback.core.sift.SiftProcessor@740f290b - End of configuration.
   [testng] [2024-03-15 00:30:59,197] [pool-1-thread-5] Initializing /data/jean-marie/Flimdata/lif_D Sample CFPYFP-cells-CFPbpFILTER-multifreq.fli: 
   [testng] 00:30:59,197 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 00:30:59,197 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:30:59,198 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-03-15_00-30-59.log]
   [testng] 00:30:59,199 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4f9b172f - End of configuration.
   [testng] [2024-03-15 00:30:59,277] [pool-1-thread-4] Initializing /data/rharkes/2018-11-28_10.04.10_sample_Rhodamine6G.fli: 
   [testng] 00:30:59,277 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 00:30:59,277 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:30:59,278 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-03-15_00-30-59.log]
   [testng] 00:30:59,278 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4b9967de - End of configuration.
   [testng] [2024-03-15 00:30:59,346] [pool-1-thread-3] Initializing /data/jean-marie/Flimdata/C Sample CFP-and-CFPYFP-cells-CFPbpFILTER-slow timelapse.fli: 
   [testng] 00:30:59,347 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 00:30:59,347 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:30:59,348 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-03-15_00-30-59.log]
   [testng] 00:30:59,349 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2b544c0d - End of configuration.
   [testng] [2024-03-15 00:30:59,418] [pool-1-thread-2] Initializing /data/LambertInstruments/cp70-euresys_Lambert HS1000_1875-ST-250(msb).fli: 
   [testng] 00:30:59,419 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 00:30:59,419 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:30:59,420 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-03-15_00-30-59.log]
   [testng] 00:30:59,420 |-INFO in ch.qos.logback.core.sift.SiftProcessor@29d64c49 - End of configuration.
   [testng] [2024-03-15 00:31:01,255] [pool-1-thread-1] Initializing /data/jean-marie/Flimdata/A Sample CFP-and-CFPYFP-cells-CFPbpFILTER.fli: 
   [testng] [2024-03-15 00:31:01,429] [pool-1-thread-7] Initializing /data/LambertInstruments/cp70-siso_Lambert HS1000_1875-ST-250(lsb).fli: 
   [testng] [2024-03-15 00:31:01,784] [pool-1-thread-8] Initializing /data/jean-marie/Flimdata/lif_E Sample Typical-Dicot-Root-Zserie-CSU22.fli: 
   [testng] [2024-03-15 00:31:01,845] [pool-1-thread-6] Initializing /data/jean-marie/Flimdata/lif_C Sample CFP-and-CFPYFP-cells-CFPbpFILTER-slow timelapse.fli: 
   [testng] [2024-03-15 00:31:02,015] [pool-1-thread-5] Initializing /data/samples/reference-simple.fli: 
   [testng] [2024-03-15 00:31:02,075] [pool-1-thread-9] Initializing /data/jean-marie/Flimdata/D Sample CFPYFP-cells-CFPbpFILTER-multifreq.fli: 
   [testng] [2024-03-15 00:31:02,333] [pool-1-thread-2] Initializing /data/samples/sample-simple.fli: 
   [testng] [2024-03-15 00:31:02,386] [pool-1-thread-4] Initializing /data/jean-marie/Flimdata/E Sample Typical-Dicot-Root-Zserie-CSU22.fli: 
   [testng] [2024-03-15 00:31:02,575] [pool-1-thread-10] Initializing /data/jean-marie/IMG_4935.JPG: 
   [testng] [2024-03-15 00:31:03,116] [pool-1-thread-11] Initializing /data/jean-marie/Flimdata/E Reference fluorescein4ns-CSU22.fli: 
   [testng] [2024-03-15 00:31:03,211] [pool-1-thread-12] Initializing /data/LambertInstruments/LambertInstruments-fli-2/15-8bit_CameraSimulator_LI-Camera-Simulator.fli: 
   [testng] [2024-03-15 00:31:04,361] [pool-1-thread-2] Initializing /data/samples/lifetime-simple.fli: 
   [testng] [2024-03-15 00:31:04,394] [pool-1-thread-5] Initializing /data/jean-marie/Flimdata/C Reference fluorescein4ns-CFPbpFILTER.fli: 
   [testng] [2024-03-15 00:31:05,195] [pool-1-thread-2] Initializing /data/jean-marie/IMG_4936.JPG: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 1378, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 24 seconds
Finished: SUCCESS