Started by upstream project "BIOFORMATS-test-repo" build number 116
originally caused by:
Started by upstream project "Trigger" build number 133
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3
[BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins16832630232363437589.sh
+ '[' gatan = slidebook ']'
++ date +%u
+ '[' 3 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_18016_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
[testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
[testng] File leak detector installed
[testng] 01:21:07,812 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 01:21:07,813 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service.
[testng] 01:21:07,813 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:21:07,814 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:21:07,815 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 01:21:07,815 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 01:21:07,816 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 01:21:07,816 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:21:07,816 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:21:07,817 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 01:21:07,817 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 01:21:07,818 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 01:21:07,978 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 01:21:07,978 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 01:21:07,998 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 01:21:07,998 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 01:21:08,003 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 01:21:08,003 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 01:21:08,003 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 01:21:08,003 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 01:21:08,003 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration.
[testng] 01:21:08,004 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point
[testng] 01:21:08,004 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 188 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-07-10 01:21:08,012] [main] java.version = 17.0.2
[testng] 01:21:08,015 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 01:21:08,015 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:21:08,052 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-10_01-21-08.log]
[testng] 01:21:08,053 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration.
[testng] [2024-07-10 01:21:08,055] [main] testng.directory = /data
[testng] [2024-07-10 01:21:08,055] [main] testng.configDirectory = /config
[testng] [2024-07-10 01:21:08,063] [main] testng.multiplier = 1.0
[testng] [2024-07-10 01:21:08,064] [main] testng.in-memory = false
[testng] [2024-07-10 01:21:08,064] [main] testng.allow-missing = false
[testng] [2024-07-10 01:21:08,064] [main] user.language = en
[testng] [2024-07-10 01:21:08,064] [main] user.country = ${user.country}
[testng] [2024-07-10 01:21:08,064] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-07-10 01:21:08,967] [main] ----------------------------------------
[testng] [2024-07-10 01:21:08,968] [main] Total files: 103
[testng] [2024-07-10 01:21:08,968] [main] Scan time: 0.902 s (8 ms/file)
[testng] [2024-07-10 01:21:08,968] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 98 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-07-10 01:21:16,620] [pool-1-thread-1] Initializing /data/chip/Nanogold-1.dm3:
[testng] 01:21:16,621 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 01:21:16,621 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:21:16,623 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-10_01-21-16.log]
[testng] 01:21:16,623 |-INFO in ch.qos.logback.core.sift.SiftProcessor@48ae8b0e - End of configuration.
[testng] [2024-07-10 01:21:16,646] [pool-1-thread-12] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4:
[testng] 01:21:16,646 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 01:21:16,647 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:21:16,648 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-10_01-21-16.log]
[testng] 01:21:16,648 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5b11a273 - End of configuration.
[testng] [2024-07-10 01:21:16,665] [pool-1-thread-11] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif:
[testng] 01:21:16,665 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 01:21:16,665 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:21:16,667 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-10_01-21-16.log]
[testng] 01:21:16,667 |-INFO in ch.qos.logback.core.sift.SiftProcessor@637c9eff - End of configuration.
[testng] [2024-07-10 01:21:16,703] [pool-1-thread-10] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4:
[testng] 01:21:16,703 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 01:21:16,704 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:21:16,705 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-10_01-21-16.log]
[testng] 01:21:16,705 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3b730b47 - End of configuration.
[testng] [2024-07-10 01:21:16,721] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4:
[testng] 01:21:16,722 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 01:21:16,722 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:21:16,722 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-10_01-21-16.log]
[testng] 01:21:16,723 |-INFO in ch.qos.logback.core.sift.SiftProcessor@359c6323 - End of configuration.
[testng] [2024-07-10 01:21:16,737] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4:
[testng] 01:21:16,738 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 01:21:16,738 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:21:16,739 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-10_01-21-16.log]
[testng] 01:21:16,740 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5ca488d0 - End of configuration.
[testng] [2024-07-10 01:21:16,819] [pool-1-thread-7] Initializing /data/jayne/AM-2/MonGb2-S7.dm3:
[testng] 01:21:16,819 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 01:21:16,819 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:21:16,820 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-10_01-21-16.log]
[testng] 01:21:16,821 |-INFO in ch.qos.logback.core.sift.SiftProcessor@282c5d4a - End of configuration.
[testng] [2024-07-10 01:21:16,879] [pool-1-thread-6] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4:
[testng] 01:21:16,879 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 01:21:16,879 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:21:16,883 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-10_01-21-16.log]
[testng] 01:21:16,884 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1a02f3df - End of configuration.
[testng] [2024-07-10 01:21:16,903] [pool-1-thread-5] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif:
[testng] 01:21:16,903 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 01:21:16,904 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:21:16,905 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-10_01-21-16.log]
[testng] 01:21:16,905 |-INFO in ch.qos.logback.core.sift.SiftProcessor@49e1efa8 - End of configuration.
[testng] [2024-07-10 01:21:17,106] [pool-1-thread-4] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4:
[testng] 01:21:17,107 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 01:21:17,113 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:21:17,114 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-10_01-21-17.log]
[testng] 01:21:17,114 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1dc69032 - End of configuration.
[testng] [2024-07-10 01:21:17,143] [pool-1-thread-3] Initializing /data/jay/samples/APC2a-e4.tif:
[testng] 01:21:17,143 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 01:21:17,143 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:21:17,144 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-10_01-21-17.log]
[testng] 01:21:17,144 |-INFO in ch.qos.logback.core.sift.SiftProcessor@51cffc54 - End of configuration.
[testng] [2024-07-10 01:21:17,235] [pool-1-thread-2] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4:
[testng] 01:21:17,235 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 01:21:17,235 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:21:17,236 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-10_01-21-17.log]
[testng] 01:21:17,236 |-INFO in ch.qos.logback.core.sift.SiftProcessor@120def1a - End of configuration.
[testng] [2024-07-10 01:21:18,711] [pool-1-thread-2] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4:
[testng] [2024-07-10 01:21:18,723] [pool-1-thread-4] Initializing /data/jay/samples/APC2a-e3.tif:
[testng] [2024-07-10 01:21:18,794] [pool-1-thread-12] Initializing /data/jayne/AM-2/MonGb3-S1.dm3:
[testng] [2024-07-10 01:21:18,809] [pool-1-thread-11] Initializing /data/jay/camtest1.dm3:
[testng] [2024-07-10 01:21:19,170] [pool-1-thread-3] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4:
[testng] [2024-07-10 01:21:19,213] [pool-1-thread-2] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif:
[testng] [2024-07-10 01:21:19,552] [pool-1-thread-8] Initializing /data/jay/samples/APC2a-e5.tif:
[testng] [2024-07-10 01:21:19,698] [pool-1-thread-9] Initializing /data/melissa/annotation-test.dm3:
[testng] [2024-07-10 01:21:19,918] [pool-1-thread-4] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4:
[testng] [2024-07-10 01:21:19,931] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4:
[testng] [2024-07-10 01:21:20,163] [pool-1-thread-2] Initializing /data/jay/smallerfile.dm3:
[testng] [2024-07-10 01:21:20,385] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4:
[testng] [2024-07-10 01:21:20,571] [pool-1-thread-8] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif:
[testng] [2024-07-10 01:21:20,772] [pool-1-thread-2] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4:
[testng] [2024-07-10 01:21:21,240] [pool-1-thread-7] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3:
[testng] [2024-07-10 01:21:21,345] [pool-1-thread-8] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4:
[testng] [2024-07-10 01:21:21,717] [pool-1-thread-8] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4:
[testng] [2024-07-10 01:21:22,075] [pool-1-thread-9] Initializing /data/qa-21647/Sample2_L1-0002.dm4:
[testng] [2024-07-10 01:21:22,262] [pool-1-thread-5] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif:
[testng] [2024-07-10 01:21:22,334] [pool-1-thread-4] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4:
[testng] [2024-07-10 01:21:22,694] [pool-1-thread-12] Initializing /data/jay/dnasample.tif:
[testng] [2024-07-10 01:21:22,913] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4:
[testng] [2024-07-10 01:21:23,303] [pool-1-thread-11] Initializing /data/jay/samples/APC2a-e4.dm3:
[testng] [2024-07-10 01:21:23,997] [pool-1-thread-1] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif:
[testng] [2024-07-10 01:21:24,131] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4:
[testng] [2024-07-10 01:21:24,704] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4:
[testng] [2024-07-10 01:21:24,900] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4:
[testng] [2024-07-10 01:21:25,831] [pool-1-thread-7] Initializing /data/jay/recAmag6500dm.dm3:
[testng] [2024-07-10 01:21:26,006] [pool-1-thread-11] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4:
[testng] [2024-07-10 01:21:26,439] [pool-1-thread-11] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4:
[testng] [2024-07-10 01:21:26,544] [pool-1-thread-8] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4:
[testng] [2024-07-10 01:21:26,721] [pool-1-thread-9] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif:
[testng] [2024-07-10 01:21:26,776] [pool-1-thread-11] Initializing /data/jay/ViewDMtest.dm3:
[testng] [2024-07-10 01:21:26,944] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4:
[testng] [2024-07-10 01:21:27,098] [pool-1-thread-9] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4:
[testng] [2024-07-10 01:21:27,123] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4:
[testng] [2024-07-10 01:21:27,199] [pool-1-thread-12] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3:
[testng] [2024-07-10 01:21:29,061] [pool-1-thread-8] Initializing /data/jayne/AM-2/MonGb2-S8.dm3:
[testng] [2024-07-10 01:21:29,167] [pool-1-thread-5] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif:
[testng] [2024-07-10 01:21:30,497] [pool-1-thread-7] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif:
[testng] [2024-07-10 01:21:30,746] [pool-1-thread-7] Initializing /data/jayne/AM-2/MonGb3-S3.dm3:
[testng] [2024-07-10 01:21:31,446] [pool-1-thread-11] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3:
[testng] [2024-07-10 01:21:31,682] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4:
[testng] [2024-07-10 01:21:32,698] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4:
[testng] [2024-07-10 01:21:33,525] [pool-1-thread-12] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3:
[testng] [2024-07-10 01:21:33,576] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4:
[testng] [2024-07-10 01:21:34,757] [pool-1-thread-8] Initializing /data/jay/recAmaghi.dm3:
[testng] [2024-07-10 01:21:34,800] [pool-1-thread-7] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif:
[testng] [2024-07-10 01:21:34,948] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4:
[testng] [2024-07-10 01:21:35,645] [pool-1-thread-5] Initializing /data/jay/biosamplefullframetif.tif:
[testng] [2024-07-10 01:21:36,906] [pool-1-thread-12] Initializing /data/qa-7642/8.dm4:
[testng] [2024-07-10 01:21:38,489] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4:
[testng] [2024-07-10 01:21:39,326] [pool-1-thread-8] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4:
[testng] [2024-07-10 01:21:40,195] [pool-1-thread-7] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4:
[testng] [2024-07-10 01:21:40,625] [pool-1-thread-12] Initializing /data/jay/biosamplefullframe.dm3:
[testng] [2024-07-10 01:21:41,006] [pool-1-thread-5] Initializing /data/samples/test-tiles.dm3:
[testng] [2024-07-10 01:21:41,162] [pool-1-thread-3] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif:
[testng] [2024-07-10 01:21:41,315] [pool-1-thread-5] Initializing /data/qa-21761/example.dm4:
[testng] [2024-07-10 01:21:42,205] [pool-1-thread-3] Initializing /data/qa-11392/Example_Gatan_File.dm4:
[testng] [2024-07-10 01:21:42,310] [pool-1-thread-5] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif:
[testng] [2024-07-10 01:21:42,670] [pool-1-thread-11] Initializing /data/jay/DMtest2.dm3:
[testng] [2024-07-10 01:21:43,505] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4:
[testng] [2024-07-10 01:21:44,089] [pool-1-thread-2] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif:
[testng] [2024-07-10 01:21:45,010] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4:
[testng] [2024-07-10 01:21:45,068] [pool-1-thread-2] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif:
[testng] [2024-07-10 01:21:45,446] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4:
[testng] [2024-07-10 01:21:45,456] [pool-1-thread-6] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3:
[testng] [2024-07-10 01:21:46,768] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4:
[testng] [2024-07-10 01:21:46,957] [pool-1-thread-12] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4:
[testng] [2024-07-10 01:21:47,439] [pool-1-thread-11] Initializing /data/ofra/lowloss.dm3:
[testng] [2024-07-10 01:21:47,492] [pool-1-thread-5] Initializing /data/jayne/AM-2/MonGb2-S9.dm3:
[testng] [2024-07-10 01:21:47,587] [pool-1-thread-10] Initializing /data/jay/dnasample1.dm3:
[testng] [2024-07-10 01:21:47,628] [pool-1-thread-11] Initializing /data/ofra/Co on INT 28-12-10.11.dm3:
[testng] [2024-07-10 01:21:47,739] [pool-1-thread-1] Initializing /data/thorsten/60kx_HAADF_03.dm3:
[testng] [2024-07-10 01:21:48,184] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4:
[testng] [2024-07-10 01:21:48,430] [pool-1-thread-1] Initializing /data/jay/graphitedm3.dm3:
[testng] [2024-07-10 01:21:48,774] [pool-1-thread-4] Initializing /data/jay/DMtest.dm3:
[testng] [2024-07-10 01:21:49,537] [pool-1-thread-6] Initializing /data/samples/mode-metadata/mode_format_test.dm3:
[testng] [2024-07-10 01:21:49,646] [pool-1-thread-2] Initializing /data/jay/samples/APC2a-e3.dm3:
[testng] [2024-07-10 01:21:49,890] [pool-1-thread-11] Initializing /data/jay/samples/APC2a-e5.dm3:
[testng] [2024-07-10 01:21:50,337] [pool-1-thread-5] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4:
[testng] [2024-07-10 01:21:50,400] [pool-1-thread-2] Initializing /data/jay/Carbon.34.dm3:
[testng] [2024-07-10 01:21:50,545] [pool-1-thread-11] Initializing /data/melissa/annotation-test.tif:
[testng] [2024-07-10 01:21:50,652] [pool-1-thread-5] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3:
[testng] [2024-07-10 01:21:50,854] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4:
[testng] [2024-07-10 01:21:51,245] [pool-1-thread-9] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 5194, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 1 minute 6 seconds
Finished: SUCCESS