Started by upstream project "BIOFORMATS-test-repo" build number 116
originally caused by:
Started by upstream project "Trigger" build number 133
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@4
[BIOFORMATS-test-folder@4] $ /bin/bash -xe /tmp/jenkins11164891860311051864.sh
+ '[' leica-lif = slidebook ']'
++ date +%u
+ '[' 3 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_18172_merge_ci -v /uod/idr/repos/curated/leica-lif:/data -v /uod/idr-scratch/merge-ci/curated/leica-lif:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
[testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
[testng] File leak detector installed
[testng] 02:44:19,245 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 02:44:19,246 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service.
[testng] 02:44:19,246 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 02:44:19,248 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 02:44:19,248 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 02:44:19,249 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 02:44:19,249 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 02:44:19,249 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 02:44:19,249 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 02:44:19,250 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 02:44:19,251 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 02:44:19,251 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 02:44:19,512 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 02:44:19,512 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 02:44:19,535 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 02:44:19,535 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 02:44:19,541 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 02:44:19,541 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 02:44:19,541 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 02:44:19,541 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 02:44:19,541 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration.
[testng] 02:44:19,542 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point
[testng] 02:44:19,542 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 293 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-07-10 02:44:19,552] [main] java.version = 17.0.2
[testng] 02:44:19,555 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 02:44:19,555 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:44:19,598 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-10_02-44-19.log]
[testng] 02:44:19,600 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration.
[testng] [2024-07-10 02:44:19,602] [main] testng.directory = /data
[testng] [2024-07-10 02:44:19,602] [main] testng.configDirectory = /config
[testng] [2024-07-10 02:44:19,610] [main] testng.multiplier = 1.0
[testng] [2024-07-10 02:44:19,611] [main] testng.in-memory = false
[testng] [2024-07-10 02:44:19,612] [main] testng.allow-missing = false
[testng] [2024-07-10 02:44:19,612] [main] user.language = en
[testng] [2024-07-10 02:44:19,612] [main] user.country = ${user.country}
[testng] [2024-07-10 02:44:19,612] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-07-10 02:48:49,029] [main] ----------------------------------------
[testng] [2024-07-10 02:48:49,029] [main] Total files: 402
[testng] [2024-07-10 02:48:49,029] [main] Scan time: 269.417 s (670 ms/file)
[testng] [2024-07-10 02:48:49,030] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 266 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-07-10 02:50:15,228] [pool-1-thread-1] Initializing /data/vytas/Image002_ch00.tif:
[testng] 02:50:15,229 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 02:50:15,229 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:50:15,231 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-10_02-50-15.log]
[testng] 02:50:15,231 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7b2803db - End of configuration.
[testng] [2024-07-10 02:50:15,271] [pool-1-thread-12] Initializing /data/matthias/ms-beats.lif:
[testng] 02:50:15,271 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 02:50:15,271 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:50:15,272 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-10_02-50-15.log]
[testng] 02:50:15,273 |-INFO in ch.qos.logback.core.sift.SiftProcessor@20f6085f - End of configuration.
[testng] [2024-07-10 02:50:15,325] [pool-1-thread-11] Initializing /data/andrew/New XZY LIF Upload/Wrong Order/XZY Stacks Wrong Order.tif:
[testng] 02:50:15,326 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 02:50:15,326 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:50:15,327 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-10_02-50-15.log]
[testng] 02:50:15,328 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3e19ce4 - End of configuration.
[testng] [2024-07-10 02:50:15,438] [pool-1-thread-10] Initializing /data/andrew/Series 68 TIFFs/Series068_t3_y4.tif:
[testng] 02:50:15,438 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 02:50:15,438 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:50:15,439 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-10_02-50-15.log]
[testng] 02:50:15,440 |-INFO in ch.qos.logback.core.sift.SiftProcessor@76a0fd4d - End of configuration.
[testng] [2024-07-10 02:50:15,485] [pool-1-thread-9] Initializing /data/jcb/201003021_Fig8B.lif:
[testng] 02:50:15,485 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 02:50:15,485 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:50:15,486 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-10_02-50-15.log]
[testng] 02:50:15,487 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6cd8776d - End of configuration.
[testng] [2024-07-10 02:50:15,595] [pool-1-thread-8] Initializing /data/andrew/Series 68 TIFFs/Series068_t6_y1.tif:
[testng] 02:50:15,595 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 02:50:15,595 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:50:15,596 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-10_02-50-15.log]
[testng] 02:50:15,597 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2236ab5e - End of configuration.
[testng] [2024-07-10 02:50:15,660] [pool-1-thread-7] Initializing /data/andrew/New XZY LIF Upload/Right Order/Right Order Montage.tif:
[testng] 02:50:15,661 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 02:50:15,661 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:50:15,662 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-10_02-50-15.log]
[testng] 02:50:15,662 |-INFO in ch.qos.logback.core.sift.SiftProcessor@302c96f2 - End of configuration.
[testng] [2024-07-10 02:50:15,757] [pool-1-thread-6] Initializing /data/andrew/Series 68 TIFFs/Series068_t3_y8.tif:
[testng] 02:50:15,757 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 02:50:15,757 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:50:15,758 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-10_02-50-15.log]
[testng] 02:50:15,759 |-INFO in ch.qos.logback.core.sift.SiftProcessor@150d6414 - End of configuration.
[testng] [2024-07-10 02:50:15,808] [pool-1-thread-5] Initializing /data/andrew/LIF Lambda/Lambda 1.lif:
[testng] 02:50:15,809 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 02:50:15,809 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:50:15,810 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-10_02-50-15.log]
[testng] 02:50:15,810 |-INFO in ch.qos.logback.core.sift.SiftProcessor@a3e809b - End of configuration.
[testng] [2024-07-10 02:50:15,873] [pool-1-thread-4] Initializing /data/andrew/Series 68 TIFFs/Series068_t9_y6.tif:
[testng] 02:50:15,873 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 02:50:15,873 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:50:15,874 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-10_02-50-15.log]
[testng] 02:50:15,875 |-INFO in ch.qos.logback.core.sift.SiftProcessor@64d63915 - End of configuration.
[testng] [2024-07-10 02:50:15,911] [pool-1-thread-3] Initializing /data/andrew/Series 68 TIFFs/Series068_t7_y7.tif:
[testng] 02:50:15,911 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 02:50:15,911 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:50:15,912 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-10_02-50-15.log]
[testng] 02:50:15,912 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5a2db2c2 - End of configuration.
[testng] [2024-07-10 02:50:15,976] [pool-1-thread-2] Initializing /data/andrew/Series 68 TIFFs/Series068_t0_y6.tif:
[testng] 02:50:15,976 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 02:50:15,976 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:50:15,977 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-10_02-50-15.log]
[testng] 02:50:15,977 |-INFO in ch.qos.logback.core.sift.SiftProcessor@93dbdef - End of configuration.
[testng] [2024-07-10 02:50:17,677] [pool-1-thread-12] Initializing /data/ian/TGN647sh-GM130-532_10mMEA_03.lif:
[testng] [2024-07-10 02:50:17,789] [pool-1-thread-11] Initializing /data/andrew/Series 68 TIFFs/Series068_t3_y5.tif:
[testng] [2024-07-10 02:50:18,071] [pool-1-thread-1] Initializing /data/andrew/Series 68 TIFFs/Series068_t4_y2.tif:
[testng] [2024-07-10 02:50:18,137] [pool-1-thread-8] Initializing /data/public/seanwarren/150519_FRAP_test_ROIs_chromagreen/FRAP000_1um.png:
[testng] [2024-07-10 02:50:18,146] [pool-1-thread-10] Initializing /data/martin/stack dapi-Alx568-reflectiveSnapshot All2.jpg:
[testng] [2024-07-10 02:50:18,404] [pool-1-thread-4] Initializing /data/fabrice/new/UL66 bicolore stacks + merge.lif:
[testng] [2024-07-10 02:50:18,944] [pool-1-thread-9] Initializing /data/public/seanwarren/150519_FRAP_test_ROIs_chromagreen/FRAP002_5um.png:
[testng] [2024-07-10 02:50:18,950] [pool-1-thread-6] Initializing /data/andrew/Series 68 TIFFs/Series068_t5_y7.tif:
[testng] [2024-07-10 02:50:18,992] [pool-1-thread-7] Initializing /data/ville/single_channel.lif:
[testng] [2024-07-10 02:50:19,017] [pool-1-thread-3] Initializing /data/alexander/20120224.lif:
[testng] [2024-07-10 02:50:19,169] [pool-1-thread-2] Initializing /data/andrew/Series 68 TIFFs/Series068_t8_y1.tif:
[testng] [2024-07-10 02:50:19,634] [pool-1-thread-5] Initializing /data/chris/free edge 6.lif:
[testng] [2024-07-10 02:50:19,826] [pool-1-thread-11] Initializing /data/olivier/120404_Li011_200V.lif:
[testng] [2024-07-10 02:50:20,057] [pool-1-thread-1] Initializing /data/christian/20090323fluoresceinRPMI.lif:
[testng] [2024-07-10 02:50:20,343] [pool-1-thread-8] Initializing /data/qa-4791/TestFlorianDescription2.lif:
[testng] [2024-07-10 02:50:20,404] [pool-1-thread-6] Initializing /data/qa-10917/P2P-MS2-lacZ.lif:
[testng] [2024-07-10 02:50:20,752] [pool-1-thread-10] Initializing /data/andrew/Series 68 TIFFs/Series068_t2_y5.tif:
[testng] [2024-07-10 02:50:20,803] [pool-1-thread-2] Initializing /data/lance/Beta Catenin.lif:
[testng] [2024-07-10 02:50:20,900] [pool-1-thread-7] Initializing /data/peter/20110916D.lif:
[testng] [2024-07-10 02:50:22,697] [pool-1-thread-9] Initializing /data/andrew/Series 68 TIFFs/Series068_t7_y2.tif:
[testng] [2024-07-10 02:50:22,758] [pool-1-thread-8] Initializing /data/qa-6635/2013_03_01_MLH1_SYCP3_HSPA2_16dpc_SC.lif:
[testng] [2024-07-10 02:50:22,831] [pool-1-thread-1] Initializing /data/andrew/Series 68 TIFFs/Series068_t9_y8.tif:
[testng] [2024-07-10 02:50:23,272] [pool-1-thread-11] Initializing /data/andrew/Series 68 TIFFs/Series068_t6_y5.tif:
[testng] [2024-07-10 02:50:23,322] [pool-1-thread-3] Initializing /data/tony/Scanerror-nested.lif:
[testng] [2024-07-10 02:50:23,641] [pool-1-thread-2] Initializing /data/leon/leon002.lif:
[testng] [2024-07-10 02:50:23,730] [pool-1-thread-8] Initializing /data/melissa/roi-test-1.xml:
[testng] [2024-07-10 02:50:23,756] [pool-1-thread-1] Initializing /data/matthias/ms-first tests.lif:
[testng] [2024-07-10 02:50:24,469] [pool-1-thread-12] Initializing /data/andrew/Series 68 TIFFs/Series068_t3_y6.tif:
[testng] [2024-07-10 02:50:24,520] [pool-1-thread-10] Initializing /data/jcb/JCB 201203109/FIG2D STAT3-EYFP BDNF.lif:
[testng] [2024-07-10 02:50:24,780] [pool-1-thread-6] Initializing /data/schek/Experiment_001.lif:
[testng] [2024-07-10 02:50:24,938] [pool-1-thread-11] Initializing /data/christophe/test_greys.lif:
[testng] [2024-07-10 02:50:24,955] [pool-1-thread-8] Initializing /data/christophe/test_greys_with_roi.lif:
[testng] [2024-07-10 02:50:24,975] [pool-1-thread-9] Initializing /data/andrew/Series 68 TIFFs/Series068_t1_y7.tif:
[testng] [2024-07-10 02:50:25,027] [pool-1-thread-2] Initializing /data/andrew/Par6 GFP delaminating cells.lif:
[testng] [2024-07-10 02:50:25,362] [pool-1-thread-3] Initializing /data/mario/2007-11-12_L15_AF001.lif:
[testng] [2024-07-10 02:50:25,650] [pool-1-thread-11] Initializing /data/public/imagesc-30856/20191025 Test FRET 585. 423, 426.lif:
[testng] [2024-07-10 02:50:25,852] [pool-1-thread-8] Initializing /data/alex/2010-11-29-test-for-OME.lif:
[testng] [2024-07-10 02:50:26,061] [pool-1-thread-12] Initializing /data/chris/kees_friday2.lif:
[testng] [2024-07-10 02:50:26,227] [pool-1-thread-9] Initializing /data/andrew/Series 68 TIFFs/Series068_t5_y3.tif:
[testng] [2024-07-10 02:50:26,601] [pool-1-thread-4] Initializing /data/andrew/Series 68 TIFFs/Series068_t5_y2.tif:
[testng] [2024-07-10 02:50:26,660] [pool-1-thread-10] Initializing /data/andrew/Series 68 TIFFs/Series068_t0_y2.tif:
[testng] [2024-07-10 02:50:26,711] [pool-1-thread-8] Initializing /data/andrew/Series 68 TIFFs/Series068_t2_y4.tif:
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[testng] [2024-07-10 02:50:36,350] [pool-1-thread-12] Initializing /data/qa-21092/1-GBP1-CaaX+LLoMe.lif:
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[testng] [2024-07-10 02:50:41,353] [pool-1-thread-5] Initializing /data/tommaso/Midollo GFAP 27.10.10 OXA+PEA 40x.lif:
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[testng] [2024-07-10 02:50:42,344] [pool-1-thread-5] Initializing /data/pascal/test.lif:
[testng] [2024-07-10 02:50:42,477] [pool-1-thread-10] Initializing /data/jean-marie/20100827G1.lif:
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[testng] [2024-07-10 02:50:45,283] [pool-1-thread-3] Initializing /data/vytas/030510-esxA-mCherry 3.lif:
[testng] [2024-07-10 02:50:45,900] [pool-1-thread-5] Initializing /data/stefan/Experiment.lif:
[testng] [2024-07-10 02:50:45,926] [pool-1-thread-2] Initializing /data/andrew/LIF Lambda/Lambda 1 file grab.bmp:
[testng] [2024-07-10 02:50:45,931] [pool-1-thread-10] Initializing /data/martin-hoehne/Niere-Schnitt-GFP-dTomato.lif:
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[testng] [2024-07-10 02:50:46,609] [pool-1-thread-1] Initializing /data/jcb/JCB 201203109/FIG 2D STAT3-EYFP CNTF.lif:
[testng] [2024-07-10 02:50:47,347] [pool-1-thread-11] Initializing /data/qa-10980/Day 2 Chitin Kan.lif:
[testng] [2024-07-10 02:50:47,482] [pool-1-thread-2] Initializing /data/andrew/New XZY LIF Upload/Wrong Order/XZY Wrong Order Merge.avi:
[testng] [2024-07-10 02:50:47,504] [pool-1-thread-8] Initializing /data/andrew/New XZY LIF Upload/Wrong Order/XZY Stacks Wrong Order Ch3.avi:
[testng] [2024-07-10 02:50:47,535] [pool-1-thread-5] Initializing /data/jcb/Figure 1A.lif:
[testng] [2024-07-10 02:50:47,809] [pool-1-thread-1] Initializing /data/andrew/Series 68 TIFFs/Series068_t3_y0.tif:
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[testng] [2024-07-10 02:50:47,959] [pool-1-thread-8] Initializing /data/jcb/JCB 201112145/Figure 3A.lif:
[testng] [2024-07-10 02:50:48,024] [pool-1-thread-5] Initializing /data/andrew/Series 68 Multi from Importer.tif:
[testng] [2024-07-10 02:50:49,311] [pool-1-thread-8] Initializing /data/fabrice/Clipboard.jpg:
[testng] [2024-07-10 02:50:49,545] [pool-1-thread-2] Initializing /data/stephen/Timelapse of RG An embryos.lif:
[testng] [2024-07-10 02:50:49,589] [pool-1-thread-1] Initializing /data/public/seanwarren/150519_FRAP_test_ROIs_chromagreen/150519_FRAP_test_ROIs_chromagreen.lif:
[testng] [2024-07-10 02:50:49,816] [pool-1-thread-8] Initializing /data/tony/OPN_cy3_dapi_trab.lif:
[testng] [2024-07-10 02:50:50,233] [pool-1-thread-9] Initializing /data/fabrice/test 2.lif:
[testng] [2024-07-10 02:50:50,648] [pool-1-thread-10] Initializing /data/andrew/LIF Lambda/Montage of Alexa 488 Lambda.tif:
[testng] [2024-07-10 02:50:51,135] [pool-1-thread-10] Initializing /data/andrew/Snapshots_1kx1k_150908.lif:
[testng] [2024-07-10 02:50:51,550] [pool-1-thread-2] Initializing /data/nicolas/Experiment.lif:
[testng] [2024-07-10 02:50:53,549] [pool-1-thread-8] Initializing /data/oliver/Multi-channel Measurements.lif:
[testng] [2024-07-10 02:50:53,655] [pool-1-thread-9] Initializing /data/melissa/Series001_z1.tif:
[testng] [2024-07-10 02:50:53,693] [pool-1-thread-1] Initializing /data/jcb/201007044/Figure 4C - F505.lif:
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[testng] [2024-07-10 02:50:55,101] [pool-1-thread-9] Initializing /data/vytas/20x deconvol demo.lif:
[testng] [2024-07-10 02:50:55,283] [pool-1-thread-12] Initializing /data/andrew/Series 68 TIFFs/Series068_t8_y0.tif:
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[testng] [2024-07-10 02:50:56,083] [pool-1-thread-12] Initializing /data/andrew/Series 68 TIFFs/Series068_t3_y7.tif:
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[testng] [2024-07-10 02:50:56,692] [pool-1-thread-11] Initializing /data/public/michael/PR2729_frameOrderCombinedScanTypes.lif:
[testng] [2024-07-10 02:50:56,852] [pool-1-thread-11] Initializing /data/dirk/Mag-test.lif:
[testng] [2024-07-10 02:50:57,079] [pool-1-thread-1] Initializing /data/jerome/E346_268_cutceaf.lif:
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[testng] [2024-07-10 02:50:57,262] [pool-1-thread-5] Initializing /data/oliver/100529.lif:
[testng] [2024-07-10 02:50:57,551] [pool-1-thread-10] Initializing /data/kristine/Kristine.lif:
[testng] [2024-07-10 02:50:57,934] [pool-1-thread-9] Initializing /data/vytas/data samples.lif:
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[testng] [2024-07-10 02:50:59,245] [pool-1-thread-11] Initializing /data/stefan/3D_Prionium_thick_stack.lif:
[testng] [2024-07-10 02:50:59,701] [pool-1-thread-11] Initializing /data/andrew/LIF Lambda/Image J Grab.tiff:
[testng] [2024-07-10 02:50:59,741] [pool-1-thread-12] Initializing /data/andrew/New XZY LIF Upload/Right Order/XZY Stacks Right Order Ch1.avi:
[testng] [2024-07-10 02:51:00,092] [pool-1-thread-12] Initializing /data/sagar/c55 scatter stage 14.lif:
[testng] [2024-07-10 02:51:00,364] [pool-1-thread-9] Initializing /data/andrew/Series 68 TIFFs/Series068_t9_y3.tif:
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[testng] [2024-07-10 02:51:01,830] [pool-1-thread-11] Initializing /data/qa-3859/LSItoday.lif:
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[testng] [2024-07-10 02:51:02,102] [pool-1-thread-3] Initializing /data/stefan/exp02.lif:
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[testng] [2024-07-10 02:51:02,494] [pool-1-thread-9] Initializing /data/mario/2007-11-13_DMEM_GFPcells.lif:
[testng] [2024-07-10 02:51:02,649] [pool-1-thread-3] Initializing /data/vytas/Experiment2.lif:
[testng] [2024-07-10 02:51:02,892] [pool-1-thread-12] Initializing /data/public/seanwarren/150519_FRAP_test_ROIs_chromagreen/FRAP001_2_5um.png:
[testng] [2024-07-10 02:51:03,013] [pool-1-thread-5] Initializing /data/andrew/Series 68 TIFFs/Series068_t2_y6.tif:
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[testng] [2024-07-10 02:51:03,462] [pool-1-thread-10] Initializing /data/sebastian/sebHaase2.lif:
[testng] [2024-07-10 02:51:03,832] [pool-1-thread-9] Initializing /data/stefan/Rx3GFP280907pos003.lif:
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[testng] [2024-07-10 02:51:04,048] [pool-1-thread-5] Initializing /data/vytas/B6 mo2 g9c8 act tc DiD 20mil 24hrs after inj rbc DiI.lif:
[testng] [2024-07-10 02:51:05,258] [pool-1-thread-3] Initializing /data/andrew/Series 68 TIFFs/Series068_t9_y4.tif:
[testng] [2024-07-10 02:51:05,497] [pool-1-thread-10] Initializing /data/public/seanwarren/150519_FRAP_test_ROIs_chromagreen/FRAP003_10um.png:
[testng] [2024-07-10 02:51:05,824] [pool-1-thread-3] Initializing /data/martin-hoehne/Niere-Schnitt5.lif:
[testng] [2024-07-10 02:51:05,963] [pool-1-thread-12] Initializing /data/andrew/Series 68 TIFFs/Series068_t1_y3.tif:
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[testng] [2024-07-10 02:51:06,643] [pool-1-thread-9] Initializing /data/matthias/directory_tree.jpg:
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[testng] [2024-07-10 02:51:07,132] [pool-1-thread-9] Initializing /data/tony/Celegeansexp01.lif:
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[testng] [2024-07-10 02:51:07,857] [pool-1-thread-10] Initializing /data/jerome/E345_312.lif:
[testng] [2024-07-10 02:51:07,898] [pool-1-thread-11] Initializing /data/claude/1A.lif:
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[testng] [2024-07-10 02:51:08,744] [pool-1-thread-3] Initializing /data/mark/Leica_FRAP_1channel_noZ-stack.lif:
[testng] [2024-07-10 02:51:09,002] [pool-1-thread-1] Initializing /data/andrew/Series 68 TIFFs/Series068_t8_y8.tif:
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[testng] [2024-07-10 02:51:10,052] [pool-1-thread-1] Initializing /data/rich/TEST.lif:
[testng] [2024-07-10 02:51:10,207] [pool-1-thread-3] Initializing /data/andrew/Series 68 TIFFs/Series068_t3_y1.tif:
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[testng] [2024-07-10 02:51:10,584] [pool-1-thread-1] Initializing /data/sagar/forMelissa.lif:
[testng] [2024-07-10 02:51:10,597] [pool-1-thread-8] Initializing /data/andrew/New XZY LIF Upload/XZY Stacks.lif:
[testng] [2024-07-10 02:51:11,053] [pool-1-thread-1] Initializing /data/andrew/Series 68 TIFFs/Series068_t1_y8.tif:
[testng] [2024-07-10 02:51:11,183] [pool-1-thread-8] Initializing /data/melissa/roi-test-1.lif:
[testng] [2024-07-10 02:51:11,195] [pool-1-thread-3] Initializing /data/andrew/Series 68 TIFFs/Series068_t1_y2.tif:
[testng] [2024-07-10 02:51:11,302] [pool-1-thread-12] Initializing /data/andrew/Series 68 TIFFs/Series068_t8_y5.tif:
[testng] [2024-07-10 02:51:11,707] [pool-1-thread-8] Initializing /data/schek/LIF2_test.lif:
[testng] [2024-07-10 02:51:11,983] [pool-1-thread-1] Initializing /data/vytas/LIFtest.lif:
[testng] [2024-07-10 02:51:12,040] [pool-1-thread-3] Initializing /data/melissa/Series001_z0.tif:
[testng] [2024-07-10 02:51:12,109] [pool-1-thread-8] Initializing /data/vytas/Experimenttest2.lif:
[testng] [2024-07-10 02:51:12,239] [pool-1-thread-12] Initializing /data/jcb/201007044/Figure 4C - F761.lif:
[testng] [2024-07-10 02:51:12,405] [pool-1-thread-9] Initializing /data/andrew/Series 68 TIFFs/Series068_t4_y8.tif:
[testng] [2024-07-10 02:51:12,448] [pool-1-thread-12] Initializing /data/jcb/201007044/Figure 4D - F761.lif:
[testng] [2024-07-10 02:51:12,504] [pool-1-thread-1] Initializing /data/andrew/FRAP_Test_12-0808.lif:
[testng] [2024-07-10 02:51:12,577] [pool-1-thread-3] Initializing /data/andrew/New XZY LIF Upload/Right Order/XZY Stacks Right Order Merge.avi:
[testng] [2024-07-10 02:51:12,641] [pool-1-thread-12] Initializing /data/andrew/Series 68 TIFFs/Series068_t6_y2.tif:
[testng] [2024-07-10 02:51:12,861] [pool-1-thread-3] Initializing /data/christophe/070921_HN_Nav.lif:
[testng] [2024-07-10 02:51:13,155] [pool-1-thread-8] Initializing /data/andrew/Series 68 TIFFs/Series068_t6_y0.tif:
[testng] [2024-07-10 02:51:13,263] [pool-1-thread-10] Initializing /data/olivier/tiled/Mike.lif:
[testng] [2024-07-10 02:51:13,309] [pool-1-thread-9] Initializing /data/andrew/Series 68 TIFFs/Series068_t9_y9.tif:
[testng] [2024-07-10 02:51:13,437] [pool-1-thread-12] Initializing /data/vytas/Series008_t000_ch00.tif:
[testng] [2024-07-10 02:51:14,059] [pool-1-thread-8] Initializing /data/schek/Experiment_001_2010.lif:
[testng] [2024-07-10 02:51:14,105] [pool-1-thread-9] Initializing /data/vytas/Experiment not horrid.lif:
[testng] [2024-07-10 02:51:14,794] [pool-1-thread-8] Initializing /data/andrew/Series 68 TIFFs/Series068_t1_y6.tif:
[testng] [2024-07-10 02:51:14,912] [pool-1-thread-1] Initializing /data/andrew/Series 68 TIFFs/Series068_t0_y4.tif:
[testng] [2024-07-10 02:51:15,729] [pool-1-thread-8] Initializing /data/andrew/Series 68 TIFFs/Series068_t6_y6.tif:
[testng] [2024-07-10 02:51:15,853] [pool-1-thread-1] Initializing /data/fabrice/test 1.lif:
[testng] [2024-07-10 02:51:16,332] [pool-1-thread-1] Initializing /data/christian/20090323illutest_BFmisaligned.lif:
[testng] [2024-07-10 02:51:16,484] [pool-1-thread-8] Initializing /data/jcb/JCB 201112145/Figure 5B.lif:
[testng] [2024-07-10 02:51:16,555] [pool-1-thread-3] Initializing /data/oliver/Single Channel Measurements.lif:
[testng] [2024-07-10 02:51:23,638] [pool-1-thread-5] Initializing /data/qa-16911/DM6000_colour-camera-12bit.lif:
[testng] [2024-07-10 02:51:23,689] [pool-1-thread-1] Initializing /data/andrew/New XZY LIF Upload/Right Order/XZY Stacks Right Order.tif:
[testng] [2024-07-10 02:51:23,768] [pool-1-thread-8] Initializing /data/garcion/testOne.lif:
[testng] [2024-07-10 02:51:23,839] [pool-1-thread-10] Initializing /data/melissa/LIF2_test-with-ROIs.lif:
[testng] [2024-07-10 02:51:23,879] [pool-1-thread-12] Initializing /data/kota/int_ok.lif:
[testng] [2024-07-10 02:51:23,911] [pool-1-thread-9] Initializing /data/richard/resolution check.lif:
[testng] [2024-07-10 02:51:23,943] [pool-1-thread-2] Initializing /data/andrew/New XZY LIF Upload/Right Order/XZY Stacks Right Order Ch2.avi:
[testng] [2024-07-10 02:51:24,294] [pool-1-thread-2] Initializing /data/andrew/Series 68 TIFFs/Series068_t0_y5.tif:
[testng] [2024-07-10 02:51:24,339] [pool-1-thread-10] Initializing /data/andrew/Series 68 TIFFs/Series068_t7_y0.tif:
[testng] [2024-07-10 02:51:24,471] [pool-1-thread-9] Initializing /data/andrew/New XZY LIF Upload/Wrong Order/XZY Stacks Wrong Order Ch2.avi:
[testng] [2024-07-10 02:51:24,521] [pool-1-thread-3] Initializing /data/andrew/Series 68 TIFFs/Series068_t8_y6.tif:
[testng] [2024-07-10 02:51:24,555] [pool-1-thread-1] Initializing /data/andrew/Series 68 TIFFs/Series068_t2_y2.tif:
[testng] [2024-07-10 02:51:24,650] [pool-1-thread-8] Initializing /data/andrew/Series 68 TIFFs/Series068_t3_y9.tif:
[testng] [2024-07-10 02:51:24,904] [pool-1-thread-9] Initializing /data/sebastian/sebHaase.lif:
[testng] [2024-07-10 02:51:25,237] [pool-1-thread-2] Initializing /data/andrew/Series 68 TIFFs/Series068_t0_y7.tif:
[testng] [2024-07-10 02:51:25,350] [pool-1-thread-10] Initializing /data/claus/080118_group3.lif:
[testng] [2024-07-10 02:51:25,491] [pool-1-thread-9] Initializing /data/pki/RA4 P3 x63.lif:
[testng] [2024-07-10 02:51:25,512] [pool-1-thread-3] Initializing /data/jcb/201007044/Figure 4D - F505.lif:
[testng] [2024-07-10 02:51:25,536] [pool-1-thread-1] Initializing /data/olivier/STAGE CONFIG1.lif:
[testng] [2024-07-10 02:51:25,579] [pool-1-thread-8] Initializing /data/martin/110921 Goedele.lif:
[testng] [2024-07-10 02:51:26,321] [pool-1-thread-3] Initializing /data/andrew/Series 68 TIFFs/Series068_t0_y8.tif:
[testng] [2024-07-10 02:51:26,675] [pool-1-thread-10] Initializing /data/andrew/SP5 FRAP/220311 FRAP YFP test.lif:
[testng] [2024-07-10 02:51:26,980] [pool-1-thread-2] Initializing /data/andrew/Series 68 TIFFs/Series068_t6_y4.tif:
[testng] [2024-07-10 02:51:27,090] [pool-1-thread-1] Initializing /data/andrew/Series 68 TIFFs/Series068_t5_y9.tif:
[testng] [2024-07-10 02:51:27,121] [pool-1-thread-9] Initializing /data/tony/20070413FLIMtest.lif:
[testng] [2024-07-10 02:51:27,408] [pool-1-thread-12] Initializing /data/andrew/Series 68 TIFFs/Series068_t7_y5.tif:
[testng] [2024-07-10 02:51:27,443] [pool-1-thread-3] Initializing /data/andrew/SP5 FRAP/ROI data.jpg:
[testng] [2024-07-10 02:51:27,661] [pool-1-thread-9] Initializing /data/andrew/Series 68 TIFFs/Series068_t2_y8.tif:
[testng] [2024-07-10 02:51:27,839] [pool-1-thread-2] Initializing /data/andrew/Series 68 TIFFs/Series068_t9_y7.tif:
[testng] [2024-07-10 02:51:27,972] [pool-1-thread-1] Initializing /data/claude/4B.lif:
[testng] [2024-07-10 02:51:28,282] [pool-1-thread-12] Initializing /data/andrew/Series 68 TIFFs/Series068_t4_y5.tif:
[testng] [2024-07-10 02:51:28,551] [pool-1-thread-9] Initializing /data/ville/expected output.png:
[testng] [2024-07-10 02:51:28,556] [pool-1-thread-2] Initializing /data/fabrice/Clipboard-1.jpg:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 14098, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 9 minutes 9 seconds
Finished: SUCCESS