Started by upstream project "BIOFORMATS-test-repo" build number 117
originally caused by:
Started by upstream project "Trigger" build number 134
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6
[BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins203587498766906469.sh
+ '[' olympus-oir = slidebook ']'
++ date +%u
+ '[' 4 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_18188_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] warning: [options] source value 8 is obsolete and will be removed in a future release
[javac] warning: [options] target value 8 is obsolete and will be removed in a future release
[javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
[javac] 4 warnings
test-automated:
[testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
[testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
[testng] File leak detector installed
[testng] 01:24:05,915 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 01:24:05,917 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - No custom configurators were discovered as a service.
[testng] 01:24:05,917 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:24:05,918 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:24:05,919 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 01:24:05,919 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 01:24:05,919 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 01:24:05,919 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:24:05,920 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:24:05,921 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 01:24:05,922 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 01:24:05,922 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 01:24:06,152 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 01:24:06,152 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 01:24:06,189 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 01:24:06,189 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 01:24:06,199 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 01:24:06,199 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 01:24:06,200 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 01:24:06,200 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 01:24:06,200 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@d9345cd - End of configuration.
[testng] 01:24:06,201 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@48aca48b - Registering current configuration as safe fallback point
[testng] 01:24:06,201 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 281 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-07-11 01:24:06,212] [main] java.version = 21
[testng] 01:24:06,216 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 01:24:06,217 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:24:06,267 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-11_01-24-06.log]
[testng] 01:24:06,269 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71687585 - End of configuration.
[testng] [2024-07-11 01:24:06,272] [main] testng.directory = /data
[testng] [2024-07-11 01:24:06,272] [main] testng.configDirectory = /config
[testng] [2024-07-11 01:24:06,286] [main] testng.multiplier = 1.0
[testng] [2024-07-11 01:24:06,287] [main] testng.in-memory = false
[testng] [2024-07-11 01:24:06,287] [main] testng.allow-missing = false
[testng] [2024-07-11 01:24:06,287] [main] user.language = en
[testng] [2024-07-11 01:24:06,287] [main] user.country = ${user.country}
[testng] [2024-07-11 01:24:06,287] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-07-11 01:24:22,278] [main] ----------------------------------------
[testng] [2024-07-11 01:24:22,279] [main] Total files: 283
[testng] [2024-07-11 01:24:22,279] [main] Scan time: 15.991 s (56 ms/file)
[testng] [2024-07-11 01:24:22,280] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 186 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-07-11 01:32:55,373] [pool-1-thread-1] Initializing /data/olympus/XYZt.oir:
[testng] 01:32:55,375 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 01:32:55,375 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:32:55,378 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-11_01-32-55.log]
[testng] 01:32:55,381 |-INFO in ch.qos.logback.core.sift.SiftProcessor@69f5834b - End of configuration.
[testng] [2024-07-11 01:32:56,776] [pool-1-thread-12] Initializing /data/olympus/_calcium sparks_XYt_/stack1/frame_t_0.ets:
[testng] 01:32:56,776 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 01:32:56,776 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:32:56,777 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-11_01-32-56.log]
[testng] 01:32:56,777 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1001100 - End of configuration.
[testng] [2024-07-11 01:32:56,875] [pool-1-thread-11] Initializing /data/olympus/spectral_scan_XYL.oir:
[testng] 01:32:56,875 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 01:32:56,875 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:32:56,876 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-11_01-32-56.log]
[testng] 01:32:56,876 |-INFO in ch.qos.logback.core.sift.SiftProcessor@44f0a472 - End of configuration.
[testng] [2024-07-11 01:32:57,353] [pool-1-thread-10] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif:
[testng] 01:32:57,353 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 01:32:57,353 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:32:57,354 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-11_01-32-57.log]
[testng] 01:32:57,355 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7e8cdc06 - End of configuration.
[testng] [2024-07-11 01:32:57,421] [pool-1-thread-9] Initializing /data/qa-17919/f10187.oir:
[testng] 01:32:57,421 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 01:32:57,422 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:32:57,423 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-11_01-32-57.log]
[testng] 01:32:57,423 |-INFO in ch.qos.logback.core.sift.SiftProcessor@190de6e9 - End of configuration.
[testng] [2024-07-11 01:33:16,471] [pool-1-thread-8] Initializing /data/public/etienne/venus stack.oir:
[testng] 01:33:16,471 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 01:33:16,472 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:33:16,473 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-11_01-33-16.log]
[testng] 01:33:16,474 |-INFO in ch.qos.logback.core.sift.SiftProcessor@182ed6e2 - End of configuration.
[testng] [2024-07-11 01:33:16,880] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.ome.tif:
[testng] 01:33:16,881 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 01:33:16,881 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:33:16,881 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-11_01-33-16.log]
[testng] 01:33:16,882 |-INFO in ch.qos.logback.core.sift.SiftProcessor@52651402 - End of configuration.
[testng] [2024-07-11 01:33:16,954] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.oir:
[testng] 01:33:16,954 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 01:33:16,954 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:33:16,955 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-11_01-33-16.log]
[testng] 01:33:16,955 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3cc549fa - End of configuration.
[testng] [2024-07-11 01:33:17,042] [pool-1-thread-5] Initializing /data/qa-17922/example_multipart.oir:
[testng] 01:33:17,042 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 01:33:17,042 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:33:17,043 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-11_01-33-17.log]
[testng] 01:33:17,043 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3520127a - End of configuration.
[testng] [2024-07-11 01:33:39,313] [pool-1-thread-4] Initializing /data/qa-17335/1.ome.tif:
[testng] 01:33:39,313 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 01:33:39,314 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:33:39,315 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-11_01-33-39.log]
[testng] 01:33:39,316 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5da29e84 - End of configuration.
[testng] [2024-07-11 01:33:39,367] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif:
[testng] 01:33:39,368 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 01:33:39,368 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:33:39,369 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-11_01-33-39.log]
[testng] 01:33:39,370 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7a428dc3 - End of configuration.
[testng] [2024-07-11 01:33:39,433] [pool-1-thread-2] Initializing /data/olympus/_stitched 4x4 zstack 10X_XYZ_/stack1/frame_t_0.ets:
[testng] 01:33:39,433 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 01:33:39,433 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:33:39,434 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-11_01-33-39.log]
[testng] 01:33:39,435 |-INFO in ch.qos.logback.core.sift.SiftProcessor@297f1f07 - End of configuration.
[testng] [2024-07-11 01:33:42,717] [pool-1-thread-7] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.ome.tif:
[testng] [2024-07-11 01:33:42,828] [pool-1-thread-12] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z_CONTROL.oir:
[testng] [2024-07-11 01:33:43,534] [pool-1-thread-10] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir:
[testng] [2024-07-11 01:33:43,645] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-P10-50 D2.tif:
[testng] [2024-07-11 01:33:43,695] [pool-1-thread-6] Initializing /data/qa-17222/ps245 red tubulin green 60x-1.oir.vsi:
[testng] [2024-07-11 01:33:43,896] [pool-1-thread-4] Initializing /data/cudmore/20190401__0005.oir:
[testng] [2024-07-11 01:33:50,348] [pool-1-thread-11] Initializing /data/qa-16881/W11-180 D3 20151021_0024.oir:
[testng] [2024-07-11 01:33:50,573] [pool-1-thread-8] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir:
[testng] [2024-07-11 01:33:50,893] [pool-1-thread-2] Initializing /data/public/etienne/venus stack.ome.tif:
[testng] [2024-07-11 01:33:51,362] [pool-1-thread-3] Initializing /data/olympus/Clipboard-stitched 4x4 zstack 10X_XYZ.tif:
[testng] [2024-07-11 01:33:51,851] [pool-1-thread-6] Initializing /data/qa-16881/P10D1 20150729.oir:
[testng] [2024-07-11 01:33:52,435] [pool-1-thread-7] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.oir:
[testng] [2024-07-11 01:33:52,711] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.oir:
[testng] [2024-07-11 01:33:53,114] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.oir:
[testng] [2024-07-11 01:33:53,266] [pool-1-thread-3] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir:
[testng] [2024-07-11 01:33:53,428] [pool-1-thread-12] Initializing /data/qa-16881/P10-50 D2.ome.tif:
[testng] [2024-07-11 01:33:53,805] [pool-1-thread-8] Initializing /data/qa-16881/Clipboard-W1-75 D11 New 20150825_0004.tif:
[testng] [2024-07-11 01:33:54,129] [pool-1-thread-11] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir:
[testng] [2024-07-11 01:33:54,314] [pool-1-thread-6] Initializing /data/olympus/Clipboard-XYZt.tif:
[testng] [2024-07-11 01:33:54,540] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif:
[testng] [2024-07-11 01:33:54,803] [pool-1-thread-3] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif:
[testng] [2024-07-11 01:33:55,358] [pool-1-thread-8] Initializing /data/qa-17917/f10010.oir:
[testng] [2024-07-11 01:34:25,542] [pool-1-thread-7] Initializing /data/qa-17335/stimulation_0001_LSM.oir:
[testng] [2024-07-11 01:34:25,829] [pool-1-thread-12] Initializing /data/qa-17335/Clipboard-1.tif:
[testng] [2024-07-11 01:34:25,866] [pool-1-thread-1] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif:
[testng] [2024-07-11 01:34:26,034] [pool-1-thread-11] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0001.tif:
[testng] [2024-07-11 01:34:26,303] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif:
[testng] [2024-07-11 01:34:26,365] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif:
[testng] [2024-07-11 01:34:26,491] [pool-1-thread-3] Initializing /data/qa-17409/Stitch_A01_G001-exported.ome.tif:
[testng] [2024-07-11 01:34:27,099] [pool-1-thread-12] Initializing /data/qa-16871/XY_0003.ome.tif:
[testng] [2024-07-11 01:34:27,448] [pool-1-thread-11] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.oir:
[testng] [2024-07-11 01:34:27,641] [pool-1-thread-2] Initializing /data/olympus/40X_4CH_XY.vsi:
[testng] [2024-07-11 01:34:27,751] [pool-1-thread-6] Initializing /data/qa-17293/2-z-t_0001_LSM.ome.tif:
[testng] [2024-07-11 01:34:27,986] [pool-1-thread-1] Initializing /data/qa-16871/Clipboard.tif:
[testng] [2024-07-11 01:34:28,177] [pool-1-thread-7] Initializing /data/qa-16881/P10D1 20150729_0024.ome.tif:
[testng] [2024-07-11 01:34:28,430] [pool-1-thread-12] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir:
[testng] [2024-07-11 01:34:29,166] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif:
[testng] [2024-07-11 01:34:29,331] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.ome.tif:
[testng] [2024-07-11 01:34:29,602] [pool-1-thread-1] Initializing /data/qa-16881/P10D1 20150729.ome.tif:
[testng] [2024-07-11 01:34:29,906] [pool-1-thread-7] Initializing /data/olympus/2017-04-20/mito_0006_0001.oir:
[testng] [2024-07-11 01:34:30,096] [pool-1-thread-2] Initializing /data/qa-17270/image1.oir:
[testng] [2024-07-11 01:34:30,492] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.oir:
[testng] [2024-07-11 01:34:30,710] [pool-1-thread-6] Initializing /data/qa-17335/Clipboard-OSR-Z.tif:
[testng] [2024-07-11 01:34:30,766] [pool-1-thread-7] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi:
[testng] [2024-07-11 01:34:30,885] [pool-1-thread-12] Initializing /data/qa-16881/P10D1 20150729_0024.oir:
[testng] [2024-07-11 01:34:31,160] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.oir:
[testng] [2024-07-11 01:34:31,289] [pool-1-thread-1] Initializing /data/qa-17335/OSR-Z.oir:
[testng] [2024-07-11 01:34:31,554] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0024.tif:
[testng] [2024-07-11 01:34:32,094] [pool-1-thread-11] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif:
[testng] [2024-07-11 01:34:32,283] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif:
[testng] [2024-07-11 01:34:32,404] [pool-1-thread-1] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir:
[testng] [2024-07-11 01:34:32,507] [pool-1-thread-2] Initializing /data/olympus/40X_4CH_XY.oir:
[testng] [2024-07-11 01:34:32,629] [pool-1-thread-7] Initializing /data/qa-17270/Clipboard-alexa488.tif:
[testng] [2024-07-11 01:34:32,699] [pool-1-thread-10] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir:
[testng] [2024-07-11 01:34:32,930] [pool-1-thread-12] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif:
[testng] [2024-07-11 01:34:33,170] [pool-1-thread-3] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir:
[testng] [2024-07-11 01:34:33,703] [pool-1-thread-11] Initializing /data/olympus/40X_4CH_XY.ome.tif:
[testng] [2024-07-11 01:34:33,890] [pool-1-thread-6] Initializing /data/olympus/Clipboard-40X_4CH_XY.tif:
[testng] [2024-07-11 01:34:33,941] [pool-1-thread-7] Initializing /data/qa-17331/60x zstack RS.oir:
[testng] [2024-07-11 01:34:34,417] [pool-1-thread-12] Initializing /data/qa-16881/W11-180 D3 20151021_0006.oir:
[testng] [2024-07-11 01:34:34,785] [pool-1-thread-10] Initializing /data/olympus/calcium sparks_XYt.oir:
[testng] [2024-07-11 01:34:35,675] [pool-1-thread-6] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif:
[testng] [2024-07-11 01:34:35,726] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Clipboard-Image_0001_0001.tif:
[testng] [2024-07-11 01:34:36,120] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif:
[testng] [2024-07-11 01:34:36,221] [pool-1-thread-7] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0019.tif:
[testng] [2024-07-11 01:34:36,929] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif:
[testng] [2024-07-11 01:34:37,135] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi:
[testng] [2024-07-11 01:34:37,463] [pool-1-thread-2] Initializing /data/qa-18802/20171020_JupGFPHisRFP_L3_30xSI_galvo_p5z_p1xy_better_than_nyquist.oir:
[testng] [2024-07-11 01:34:38,306] [pool-1-thread-7] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir:
[testng] [2024-07-11 01:34:38,906] [pool-1-thread-12] Initializing /data/olympus/2017-11-20/xytz_golgi/xytz_golgi.oir:
[testng] [2024-07-11 01:34:40,002] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.ome.tif:
[testng] [2024-07-11 01:34:40,238] [pool-1-thread-3] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif:
[testng] [2024-07-11 01:34:40,327] [pool-1-thread-1] Initializing /data/qa-16881/P10-50 D2_0006.ome.tif:
[testng] [2024-07-11 01:34:40,792] [pool-1-thread-6] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif:
[testng] [2024-07-11 01:34:40,846] [pool-1-thread-11] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif:
[testng] [2024-07-11 01:34:41,197] [pool-1-thread-10] Initializing /data/qa-17335/OSR-Z.ome.tif:
[testng] [2024-07-11 01:34:42,032] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif:
[testng] [2024-07-11 01:34:42,245] [pool-1-thread-11] Initializing /data/qa-17270/stack1.ome.tif:
[testng] [2024-07-11 01:34:42,615] [pool-1-thread-6] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir:
[testng] [2024-07-11 01:34:42,838] [pool-1-thread-10] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/matl.omp2info:
[testng] [2024-07-11 01:34:45,956] [pool-1-thread-1] Initializing /data/olympus/Stitched_XYZ.oir:
[testng] [2024-07-11 01:34:46,491] [pool-1-thread-11] Initializing /data/public/etienne/amy slice z stack_0001.ome.tif:
[testng] [2024-07-11 01:34:46,593] [pool-1-thread-7] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif:
[testng] [2024-07-11 01:34:47,518] [pool-1-thread-6] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir:
[testng] [2024-07-11 01:34:47,688] [pool-1-thread-3] Initializing /data/olympus/2017-11-20/fish_overview/fish-overview-night.oir:
[testng] [2024-07-11 01:34:52,624] [pool-1-thread-4] Initializing /data/qa-17270/image1.ome.tif:
[testng] [2024-07-11 01:34:52,716] [pool-1-thread-11] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif:
[testng] [2024-07-11 01:34:52,825] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-Caged Glu-3 point.tif:
[testng] [2024-07-11 01:34:53,512] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-LILY POLLEN.tif:
[testng] [2024-07-11 01:34:53,643] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Clipboard-Image_0099_0001.tif:
[testng] [2024-07-11 01:34:53,787] [pool-1-thread-6] Initializing /data/olympus/calcium sparks_XYt.ome.tif:
[testng] [2024-07-11 01:34:53,957] [pool-1-thread-4] Initializing /data/qa-17409/Stitch_A01_G001.oir:
[testng] [2024-07-11 01:34:54,399] [pool-1-thread-2] Initializing /data/olympus/2017-04-20/Clipboard.tif:
[testng] [2024-07-11 01:34:54,629] [pool-1-thread-11] Initializing /data/qa-17331/60x zstack RS.ome.tif:
[testng] [2024-07-11 01:34:54,722] [pool-1-thread-7] Initializing /data/public/etienne/amy slice z stack_0001.oir:
[testng] [2024-07-11 01:34:55,600] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/Clipboard.tif:
[testng] [2024-07-11 01:34:55,659] [pool-1-thread-1] Initializing /data/qa-16881/P10-50 D2_0006.oir:
[testng] [2024-07-11 01:34:55,976] [pool-1-thread-2] Initializing /data/qa-16881/P10D1 20150729_0019.oir:
[testng] [2024-07-11 01:34:56,450] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir:
[testng] [2024-07-11 01:34:56,548] [pool-1-thread-11] Initializing /data/qa-17293/Clipboard.tif:
[testng] [2024-07-11 01:34:56,603] [pool-1-thread-7] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir:
[testng] [2024-07-11 01:34:57,656] [pool-1-thread-1] Initializing /data/olympus/2017-04-20/mito_0006_0001.ome.tif:
[testng] [2024-07-11 01:34:57,717] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.oir:
[testng] [2024-07-11 01:34:57,832] [pool-1-thread-6] Initializing /data/qa-16881/P10-50 D2.oir:
[testng] [2024-07-11 01:34:58,022] [pool-1-thread-2] Initializing /data/qa-17270/stack1.oir:
[testng] [2024-07-11 01:34:59,794] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif:
[testng] [2024-07-11 01:35:00,291] [pool-1-thread-1] Initializing /data/qa-17270/alexa488.oir:
[testng] [2024-07-11 01:35:00,453] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif:
[testng] [2024-07-11 01:35:00,558] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-W1-135 D6 New 20150818_0010.tif:
[testng] [2024-07-11 01:35:00,976] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif:
[testng] [2024-07-11 01:35:01,049] [pool-1-thread-6] Initializing /data/qa-16881/P10-50 D2_0019.ome.tif:
[testng] [2024-07-11 01:35:01,604] [pool-1-thread-7] Initializing /data/olympus/calcium sparks.jpg:
[testng] [2024-07-11 01:35:01,797] [pool-1-thread-12] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.ome.tif:
[testng] [2024-07-11 01:35:01,925] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir:
[testng] [2024-07-11 01:35:02,379] [pool-1-thread-1] Initializing /data/qa-16881/W11-180 D3 20151021_0024.ome.tif:
[testng] [2024-07-11 01:35:02,638] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.oir:
[testng] [2024-07-11 01:35:03,006] [pool-1-thread-6] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif:
[testng] [2024-07-11 01:35:03,335] [pool-1-thread-11] Initializing /data/qa-17270/alexa488.ome.tif:
[testng] [2024-07-11 01:35:03,619] [pool-1-thread-12] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.ome.tif:
[testng] [2024-07-11 01:35:03,826] [pool-1-thread-1] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir:
[testng] [2024-07-11 01:35:04,217] [pool-1-thread-6] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/image_Cycle_02.oir:
[testng] [2024-07-11 01:35:04,453] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.ome.tif:
[testng] [2024-07-11 01:35:05,050] [pool-1-thread-12] Initializing /data/martin/20170824_JupGFP_HisRFP_wL3_30xSI_4xzoom_0p5z_A01_G001_0001.oir:
[testng] [2024-07-11 01:35:59,891] [pool-1-thread-11] Initializing /data/qa-17409/Clipboard.tif:
[testng] [2024-07-11 01:35:59,993] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Clipboard-Image_0033_0001.tif:
[testng] [2024-07-11 01:36:00,718] [pool-1-thread-7] Initializing /data/olympus/spectral_scan_XYL.ome.tif:
[testng] [2024-07-11 01:36:00,810] [pool-1-thread-6] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/matl.omp2info:
[testng] [2024-07-11 01:36:03,129] [pool-1-thread-11] Initializing /data/qa-17293/2-z-t_0001_LSM.oir:
[testng] [2024-07-11 01:36:03,358] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.oir:
[testng] [2024-07-11 01:36:04,237] [pool-1-thread-1] Initializing /data/public/etienne/Clipboard-venus stack.tif:
[testng] [2024-07-11 01:36:04,464] [pool-1-thread-2] Initializing /data/qa-17335/1.oir:
[testng] [2024-07-11 01:36:04,813] [pool-1-thread-11] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir:
[testng] [2024-07-11 01:36:08,791] [pool-1-thread-7] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info:
[testng] [2024-07-11 01:36:12,169] [pool-1-thread-2] Initializing /data/qa-16871/XY_0003.oir:
[testng] [2024-07-11 01:36:12,424] [pool-1-thread-1] Initializing /data/qa-17270/Clipboard-image1.tif:
[testng] [2024-07-11 01:36:12,966] [pool-1-thread-2] Initializing /data/qa-17270/Clipboard-stack1.tif:
[testng] [2024-07-11 01:36:13,809] [pool-1-thread-1] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.ome.tif:
[testng] [2024-07-11 01:36:14,132] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.oir:
[testng] [2024-07-11 01:36:14,436] [pool-1-thread-4] Initializing /data/qa-16881/Clipboard-P10-50 D2_0019.tif:
[testng] [2024-07-11 01:36:15,537] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.ome.tif:
[testng] [2024-07-11 01:36:16,023] [pool-1-thread-2] Initializing /data/public/etienne/coupe shg stack_0001.ome.tif:
[testng] [2024-07-11 01:36:16,168] [pool-1-thread-1] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi:
[testng] [2024-07-11 01:36:16,735] [pool-1-thread-4] Initializing /data/qa-16881/Clipboard-P10-50 D2_0006.tif:
[testng] [2024-07-11 01:36:17,571] [pool-1-thread-2] Initializing /data/qa-16881/P10D1 20150729_0019.ome.tif:
[testng] [2024-07-11 01:36:17,863] [pool-1-thread-1] Initializing /data/olympus/2021-04-20/overview 2 x_Cycle_01/matl.omp2info:
[testng] [2024-07-11 01:36:17,955] [pool-1-thread-4] Initializing /data/qa-16881/Clipboard-P10D1 20150729.tif:
[testng] [2024-07-11 01:36:18,982] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Clipboard-Image_0079_0001.tif:
[testng] [2024-07-11 01:36:19,076] [pool-1-thread-4] Initializing /data/olympus/Stitched_XYZ.ome.tif:
[testng] [2024-07-11 01:36:19,907] [pool-1-thread-1] Initializing /data/olympus/XYZt.vsi:
[testng] [2024-07-11 01:36:20,172] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Clipboard-Image_0050_0001.tif:
[testng] [2024-07-11 01:36:20,589] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/zebra shg.oir:
[testng] [2024-07-11 01:36:23,103] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif:
[testng] [2024-07-11 01:36:23,353] [pool-1-thread-3] Initializing /data/qa-17335/Clipboard-stimulation_0001_LSM.tif:
[testng] [2024-07-11 01:36:23,536] [pool-1-thread-4] Initializing /data/olympus/Clipboard-calcium sparks_XYt.tif:
[testng] [2024-07-11 01:36:24,114] [pool-1-thread-2] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0024.tif:
[testng] [2024-07-11 01:36:24,496] [pool-1-thread-3] Initializing /data/qa-16881/P10-50 D2_0019.oir:
[testng] [2024-07-11 01:36:24,912] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-PA-GFPv-2.tif:
[testng] [2024-07-11 01:36:25,441] [pool-1-thread-2] Initializing /data/qa-17331/Clipboard.tif:
[testng] [2024-07-11 01:36:26,047] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif:
[testng] [2024-07-11 01:36:26,099] [pool-1-thread-4] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png:
[testng] [2024-07-11 01:36:26,328] [pool-1-thread-4] Initializing /data/olympus/XYZt.ome.tif:
[testng] [2024-07-11 01:36:26,700] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Clipboard-Image_0091_0001.tif:
[testng] [2024-07-11 01:36:27,359] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir:
[testng] [2024-07-11 01:36:28,016] [pool-1-thread-2] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.oir:
[testng] [2024-07-11 01:36:29,247] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.oir:
[testng] [2024-07-11 01:36:29,373] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir:
[testng] [2024-07-11 01:36:30,452] [pool-1-thread-4] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif:
[testng] [2024-07-11 01:36:30,528] [pool-1-thread-2] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif:
[testng] [2024-07-11 01:36:30,661] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-W4-0 D14 New 20150828_0007.tif:
[testng] [2024-07-11 01:36:31,409] [pool-1-thread-10] Initializing /data/public/etienne/coupe shg stack_0001.oir:
[testng] [2024-07-11 01:36:31,947] [pool-1-thread-3] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.ome.tif:
[testng] [2024-07-11 01:36:32,034] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif:
[testng] [2024-07-11 01:36:32,792] [pool-1-thread-2] Initializing /data/qa-21508/Stitch_A01_G008.oir:
[testng] [2024-07-11 01:36:32,994] [pool-1-thread-4] Initializing /data/olympus/Stitched_XYZ.vsi:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 9858, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 48 minutes 27 seconds
Finished: SUCCESS